Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.1e-175 619.0 326 100.0
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.2e-167 593.2 330 95.5
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.5e-104 382.9 329 64.1
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 7.0e-99 364.8 334 62.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 2.9e-92 342.8 340 57.9
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 3.7e-92 342.4 327 61.2
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 5.4e-91 338.6 331 59.8
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 4.6e-90 335.5 330 58.5
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 7.8e-90 334.7 337 59.9
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 9.5e-88 327.8 325 57.5
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 2.8e-87 326.2 338 56.5
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 2.9e-84 316.2 335 56.1
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.6e-82 310.5 329 55.0
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.6e-82 310.5 322 56.2
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 2.3e-81 306.6 325 55.7
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 3.9e-81 305.8 344 52.3
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 6.6e-81 305.1 334 55.4
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 8.7e-81 304.7 335 54.3
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.1e-80 304.3 327 55.4
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 1.1e-80 304.3 326 56.1
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.5e-80 303.9 314 56.1
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.9e-80 303.5 335 54.9
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 2.5e-80 303.1 338 54.7
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 3.3e-80 302.8 332 53.3
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 4.3e-80 302.4 328 56.7
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 5.6e-80 302.0 336 53.9
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 9.6e-80 301.2 323 56.7
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 2.8e-79 299.7 321 56.7
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 4.7e-79 298.9 322 55.0
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 4.7e-79 298.9 336 55.4
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 6.2e-79 298.5 332 53.0
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.1e-78 297.7 327 54.4
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.1e-78 297.7 330 54.8
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.4e-78 297.4 327 54.4
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.8e-78 297.0 326 53.7
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 2.4e-78 296.6 332 54.5
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 3.1e-78 296.2 325 55.1
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.1e-78 296.2 323 55.4
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.1e-78 296.2 323 55.4
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 3.1e-78 296.2 342 52.9
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.9e-78 295.0 325 55.1
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.5e-77 293.9 330 53.0
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.0e-77 293.5 325 54.8
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 2.6e-77 293.1 327 55.0
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 2.6e-77 293.1 349 52.1
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.3e-76 290.8 330 51.5
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.7e-76 290.4 330 53.3
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 3.8e-76 289.3 323 55.4
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.4e-75 287.3 333 52.9
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 4.2e-75 285.8 330 49.7
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 5.4e-75 285.4 321 53.6
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 1.2e-74 284.3 313 54.3
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.7e-73 280.4 338 51.2
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.1e-72 277.7 317 52.1
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 9.6e-72 274.6 328 50.6
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.1e-70 271.2 339 49.0
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.4e-70 270.0 301 54.2
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 4.0e-70 269.2 326 51.8
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.0e-70 268.1 337 48.7
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.0e-69 266.9 325 50.2
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 2.6e-69 266.5 340 48.5
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 5.8e-69 265.4 322 49.4
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.6e-69 265.0 330 50.6
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.3e-68 264.2 295 53.9
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.7e-68 263.8 313 50.5
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 2.9e-68 263.1 325 50.2
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.8e-68 262.7 327 48.3
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.9e-68 262.3 324 51.2
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 8.4e-68 261.5 321 51.1
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.4e-67 260.8 335 49.9
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.4e-67 260.8 332 48.8
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 4.2e-67 259.2 321 48.0
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 4.2e-67 259.2 308 51.6
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 5.4e-67 258.8 327 49.5
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 2.7e-66 256.5 338 50.0
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 2.7e-66 256.5 138 87.0
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 4.6e-66 255.8 322 48.8
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.3e-65 253.4 326 48.8
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 2.3e-65 253.4 355 51.8
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 3.0e-65 253.1 362 49.2
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.5e-64 250.0 329 48.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 7.4e-64 248.4 309 47.6
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 3.4e-61 239.6 364 42.9
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.3e-60 237.7 405 45.2
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 3.9e-57 226.1 127 82.7
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 3.3e-56 223.0 317 42.9
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 5.3e-54 215.7 341 43.1
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.2e-52 210.3 323 46.4
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.9e-50 201.8 109 81.7
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 2.3e-49 200.3 109 83.5
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 5.1e-49 199.1 328 42.1
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.5e-48 197.6 109 83.5
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 2.5e-48 196.8 276 48.6
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 5.7e-48 195.7 302 41.1
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 3.1e-46 189.9 135 68.1
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 5.9e-45 185.7 135 63.7
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 5.0e-44 182.6 98 82.7
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 1.9e-43 180.6 242 50.8
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.2e-43 179.9 98 85.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.4e-41 174.5 98 81.6
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 1.7e-39 167.5 95 80.0
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 3.7e-39 166.4 124 62.9
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 5.3e-38 162.5 124 66.9
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 5.0e-36 156.0 98 73.5
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 2.3e-33 147.1 98 71.4
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 3.7e-31 139.8 232 42.7
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.3e-28 131.3 219 45.2
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 1.7e-23 114.4 234 39.7
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.0e-20 105.1 237 39.7
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.2e-17 92.8 221 35.3
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 4.5e-13 79.7 92 51.1
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 4.5e-13 79.7 92 51.1
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 4.5e-13 79.7 92 51.1
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 5.9e-13 79.3 50 72.0
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.1e-11 75.1 82 50.0
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.5e-11 74.7 145 38.6
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 3.2e-11 73.6 41 80.5
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.6e-10 71.2 219 31.1
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 6.8e-09 65.9 220 31.4
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.6e-08 63.9 44 65.9
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.8e-07 60.5 219 28.3
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 1.4e-06 58.2 139 35.3
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 1.8e-06 57.8 137 34.3


User provided reference genes

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