Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 7.5e-130 467.2 241 100.0
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 3.0e-123 445.3 241 96.3
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 1.5e-37 160.6 238 40.8
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 2.5e-37 159.8 245 39.2
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.1e-35 154.5 244 41.4
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 2.6e-34 149.8 146 50.7
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 7.7e-34 148.3 253 40.3
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 3.8e-33 146.0 235 39.6
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 6.5e-33 145.2 237 40.5
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 8.5e-33 144.8 233 41.6
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 8.5e-33 144.8 240 36.7
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 8.5e-33 144.8 144 50.0
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.2e-32 142.9 245 37.1
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 4.2e-32 142.5 247 36.0
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 6.1e-31 138.7 245 38.8
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.4e-30 137.5 196 43.4
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.4e-30 137.5 249 37.3
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 1.8e-30 137.1 194 43.3
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 5.1e-30 135.6 243 38.7
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 6.7e-30 135.2 231 37.2
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 1.5e-29 134.0 240 40.0
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 5.7e-29 132.1 234 37.2
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 7.4e-29 131.7 247 36.8
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 7.4e-29 131.7 235 35.7
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 9.7e-29 131.3 160 44.4
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 9.7e-29 131.3 195 42.1
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 9.7e-29 131.3 250 38.0
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.3e-28 131.0 192 39.1
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 1.7e-28 130.6 238 38.2
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 2.2e-28 130.2 235 39.1
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 2.2e-28 130.2 247 36.8
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 3.7e-28 129.4 241 36.9
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.7e-28 129.4 242 37.2
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.7e-28 129.4 112 54.5
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 4.8e-28 129.0 232 39.7
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 6.3e-28 128.6 241 38.6
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 6.3e-28 128.6 184 40.8
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 6.3e-28 128.6 228 36.4
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.1e-27 127.9 189 41.3
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.1e-27 127.9 192 40.6
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.1e-27 127.9 240 34.6
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 1.4e-27 127.5 149 45.0
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 1.4e-27 127.5 248 37.1
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 1.8e-27 127.1 249 35.7
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 1.8e-27 127.1 246 36.6
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 2.4e-27 126.7 99 55.6
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 4.1e-27 125.9 233 36.1
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 4.1e-27 125.9 243 35.8
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 5.3e-27 125.6 232 38.8
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 5.3e-27 125.6 247 36.0
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 6.9e-27 125.2 241 37.8
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.2e-26 124.4 190 41.1
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.2e-26 124.4 144 43.1
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 2.0e-26 123.6 103 56.3
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 2.6e-26 123.2 285 31.2
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 2.6e-26 123.2 208 40.9
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 4.5e-26 122.5 246 35.0
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 4.5e-26 122.5 173 40.5
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 5.9e-26 122.1 105 57.1
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 5.9e-26 122.1 242 36.4
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 7.7e-26 121.7 251 34.7
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 1.0e-25 121.3 110 51.8
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.3e-25 120.9 148 43.9
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 2.2e-25 120.2 117 47.9
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 2.2e-25 120.2 191 38.7
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 2.9e-25 119.8 231 37.7
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 2.9e-25 119.8 239 36.0
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 3.8e-25 119.4 243 37.0
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 3.8e-25 119.4 155 40.0
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.5e-25 118.2 239 34.3
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 8.5e-25 118.2 249 36.1
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 2.5e-24 116.7 196 36.7
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 3.2e-24 116.3 257 36.2
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 4.2e-24 115.9 148 42.6
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 4.2e-24 115.9 197 37.1
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 4.2e-24 115.9 231 36.8
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 9.4e-24 114.8 249 35.7
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.6e-23 114.0 229 34.1
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.6e-23 114.0 245 34.3
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 3.6e-23 112.8 241 34.4
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-23 112.8 102 51.0
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 1.8e-22 110.5 152 40.1
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 2.3e-22 110.2 98 50.0
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 3.9e-22 109.4 241 35.3
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 8.8e-22 108.2 149 43.6
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 8.8e-22 108.2 108 50.0
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 2.6e-21 106.7 245 35.5
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 7.4e-21 105.1 213 35.2
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 7.4e-21 105.1 154 39.6
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 3.1e-19 99.8 242 32.6
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 7.0e-19 98.6 130 40.8
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 2.0e-18 97.1 136 39.7
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 2.6e-18 96.7 130 40.8
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.0e-17 94.7 231 31.2
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 1.0e-17 94.7 231 31.2
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 3.8e-17 92.8 92 48.9
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.2e-15 87.8 82 47.6
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 3.6e-15 86.3 184 36.4
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 1.4e-14 84.3 218 30.3
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 4.0e-14 82.8 99 42.4
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 6.7e-14 82.0 78 51.3
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 2.2e-09 67.0 64 42.2
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 3.2e-08 63.2 68 41.2


User provided reference genes

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