Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 0.0e+00 1404.4 705 100.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 0.0e+00 1397.5 704 99.6
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.3e-174 617.5 737 49.8
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.6e-164 583.9 675 50.8
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.5e-154 550.8 679 49.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.6e-154 550.1 538 58.0
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.7e-153 546.2 663 49.5
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 5.5e-141 505.8 733 44.5
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 2.8e-132 476.9 712 44.5
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.5e-117 427.2 713 42.1
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.5e-117 427.2 713 42.1
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.5e-117 427.2 713 42.1
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 9.5e-117 425.2 478 51.9
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 6.8e-115 419.1 732 41.3
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 6.8e-115 419.1 732 41.3
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 2.6e-114 417.2 732 41.1
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 3.3e-109 400.2 509 49.5
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 6.6e-94 349.4 736 37.2
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 4.3e-93 346.7 647 40.5
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 6.2e-92 342.8 513 42.9
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 6.6e-86 322.8 447 45.4
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 3.5e-79 300.4 285 57.2
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 7.9e-79 299.3 461 42.7
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 1.2e-74 285.4 397 48.1
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 3.3e-69 267.3 408 42.4
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 7.4e-69 266.2 501 39.7
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.6e-68 265.0 302 51.7
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 9.0e-67 259.2 517 37.9
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 4.9e-65 253.4 702 31.8
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 4.2e-64 250.4 551 35.6
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 6.0e-63 246.5 423 41.6
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 2.5e-61 241.1 466 39.3
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 1.4e-59 235.3 364 40.4
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.9e-56 224.9 235 55.3
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-55 221.9 408 38.5
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 2.1e-55 221.5 423 39.0
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.1e-55 221.5 383 39.4
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 3.6e-55 220.7 380 39.7
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.6e-55 220.7 384 39.6
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 8.8e-54 216.1 110 90.0
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.5e-50 205.3 241 49.0
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.6e-50 204.5 375 38.4
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 7.4e-45 186.4 250 47.2
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 9.7e-45 186.0 419 37.2
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 5.3e-43 180.3 159 61.6
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.5e-42 178.7 385 35.1
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 3.4e-42 177.6 224 50.4
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 3.2e-40 171.0 219 47.0
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 3.2e-40 171.0 218 46.3
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.5e-40 170.2 349 35.8
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.5e-40 170.2 349 35.8
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-39 167.9 301 39.5
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-39 167.9 301 39.5
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 1.1e-35 156.0 129 58.9
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 3.1e-35 154.5 128 59.4
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-34 151.4 221 48.4
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 5.0e-33 147.1 96 68.8
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 6.5e-33 146.7 166 44.6
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.5e-33 146.4 322 34.8
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.6e-29 134.8 131 58.0
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 8.2e-28 129.8 213 41.8
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 1.1e-27 129.4 123 51.2
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.4e-27 129.0 113 54.0
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.8e-27 128.6 81 71.6
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.8e-27 128.6 379 29.6
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-26 125.9 98 57.1
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-26 125.9 94 58.5
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-26 125.9 98 57.1
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 3.5e-26 124.4 58 98.3
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 5.9e-26 123.6 311 34.1
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.0e-25 122.9 380 28.9
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 3.2e-24 117.9 221 40.3
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 2.1e-23 115.2 166 44.0
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.6e-23 114.4 286 31.5
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.0e-22 112.8 109 50.5
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.4e-22 112.5 149 48.3
GSVIVG01029921001 Vitis vinifera HOM05D001070 ORTHO05D005132 3.0e-22 111.3 151 47.0
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 5.2e-22 110.5 190 37.9
Oeu058851.1 Olea europaea HOM05D001070 ORTHO05D010233 1.2e-21 109.4 81 65.4
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 1.3e-20 105.9 157 42.7
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 4.8e-20 104.0 119 49.6
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 8.3e-20 103.2 123 48.8
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 9.1e-19 99.8 137 46.0
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 7.7e-18 96.7 92 58.7
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 7.7e-18 96.7 78 61.5
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.0e-17 96.3 90 62.2
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 5.0e-17 94.0 122 41.8
Medtr1g041530 Medicago truncatula HOM05D001070 ORTHO05D005132 1.9e-16 92.0 143 39.9
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.9e-16 92.0 126 38.9
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.2e-15 89.4 116 42.2
Gorai.011G078900 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.1e-15 88.6 88 50.0
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.1e-15 88.6 177 36.2
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.1e-15 88.6 177 36.2
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 6.1e-15 87.0 58 69.0
Lj9P89T23 Lonicera japonica HOM05D001070 ORTHO05D005132 6.1e-15 87.0 166 42.2
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 1.0e-14 86.3 49 75.5
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.0e-14 86.3 191 32.5
Glyma.13G038800 Glycine max HOM05D001070 ORTHO05D010233 2.3e-14 85.1 80 55.0
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 4.0e-14 84.3 173 36.4
Solyc01g009550.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 6.8e-14 83.6 85 57.6
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-13 82.4 155 36.8
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 1.5e-13 82.4 88 40.9
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 2.6e-13 81.6 88 40.9
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.6e-13 81.6 88 40.9
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 2.6e-13 81.6 88 40.9
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.6e-13 81.6 88 40.9
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.6e-13 81.6 88 40.9
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.6e-13 81.6 88 40.9
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 7.5e-13 80.1 458 24.5
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 3.7e-12 77.8 72 58.3
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 4.9e-12 77.4 88 39.8
C04p22490 Brassica napus HOM05D000729 ORTHO05D001063 8.3e-12 76.6 76 50.0
Solyc02g011830.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.1e-11 76.3 67 53.7
Medtr1g037160 Medicago truncatula HOM05D001070 ORTHO05D005132 1.8e-11 75.5 175 36.0
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 9.2e-11 73.2 72 54.2
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 1.2e-10 72.8 78 46.2
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 1.2e-10 72.8 97 44.3
Nitab4.5_0006502g0060 Nicotiana tabacum HOM05D001070 ORTHO05D005132 2.0e-10 72.0 75 49.3
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 1.3e-09 69.3 49 57.1
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 1.7e-09 68.9 83 48.2
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 2.3e-09 68.6 45 62.2
Potri.010G052900 Populus trichocarpa HOM05D001070 ORTHO05D005132 2.3e-09 68.6 81 50.6
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.0e-09 67.4 64 53.1
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 6.6e-09 67.0 96 42.7
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 8.6e-09 66.6 52 51.9
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 2.5e-08 65.1 83 45.8
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 2.5e-08 65.1 83 45.8
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 4.3e-08 64.3 45 55.6
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.6e-08 63.9 87 42.5
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 7.3e-08 63.5 88 44.3
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 3.6e-07 61.2 123 35.0
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 4.7e-07 60.8 61 45.9
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-06 58.9 101 38.6
Gohir.1Z049494 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.2e-06 57.4 54 48.1
Nitab4.5_0010788g0060 Nicotiana tabacum HOM05D001070 ORTHO05D028533 5.2e-06 57.4 81 39.5
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 6.8e-06 57.0 25 92.0


User provided reference genes

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