Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0458 Papaver somniferum HOM05D005742 ORTHO05D001888 3.1e-136 490.7 1205 100.0
PSO170G5750 Papaver somniferum HOM05D005742 ORTHO05D001888 9.6e-85 319.7 1215 83.8
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 1.8e-19 102.8 173 32.9
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 4.5e-18 98.2 166 33.1
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 2.9e-17 95.5 171 31.0
Prupe.1G118800 Prunus persica HOM05D005742 ORTHO05D001888 1.5e-16 93.2 170 32.4
Rhsim02G0004500 Rhododendron simsii HOM05D005742 ORTHO05D001888 5.6e-16 91.3 174 30.5
MD16G1155100 Malus domestica HOM05D005742 ORTHO05D001888 8.0e-15 87.4 173 29.5
DCAR_027000 Daucus carota HOM05D005742 ORTHO05D001888 4.0e-14 85.1 170 28.8
Oeu032017.1 Olea europaea HOM05D005742 ORTHO05D001888 4.0e-14 85.1 174 30.5
vmacro08056 Vaccinium macrocarpon HOM05D001258 ORTHO05D000158 4.0e-14 85.1 158 28.5
Oeu003757.1 Olea europaea HOM05D005742 ORTHO05D001888 1.5e-13 83.2 168 28.6
vmacro15186 Vaccinium macrocarpon HOM05D005742 ORTHO05D001888 1.5e-13 83.2 157 28.7
Nn3g21713 Nelumbo nucifera HOM05D005742 ORTHO05D001888 2.6e-13 82.4 181 29.8
QL06p011856 Quercus lobata HOM05D005742 ORTHO05D001888 4.4e-13 81.6 171 29.8
Actinidia18454 Actinidia chinensis HOM05D005742 ORTHO05D001888 7.5e-13 80.9 160 26.2
Actinidia40376 Actinidia chinensis HOM05D005742 ORTHO05D001888 7.5e-13 80.9 160 26.2
Nn4g25584 Nelumbo nucifera HOM05D005742 ORTHO05D001888 7.5e-13 80.9 181 31.5
CANSAT78G0521 Cannabis sativa HOM05D005742 ORTHO05D001888 9.8e-13 80.5 161 28.6
CDE02G2547 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 9.8e-13 80.5 173 30.1
Actinidia15607 Actinidia chinensis HOM05D005742 ORTHO05D001888 1.3e-12 80.1 174 27.6
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 1.3e-12 80.1 160 31.2
Dinv15186 Davidia involucrata HOM05D001340 ORTHO05D002318 1.3e-12 80.1 149 30.9
Cfa015324 Carpinus fangiana HOM05D005742 ORTHO05D001888 1.7e-12 79.7 168 31.5
CSS0018184 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 2.9e-12 79.0 160 25.0
CSS0026509 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 2.9e-12 79.0 160 25.0
CiPaw.02G075500 Carya illinoinensis HOM05D005742 ORTHO05D001888 2.9e-12 79.0 160 28.1
TAR633G1530 Trochodendron aralioides HOM05D005742 ORTHO05D001888 2.9e-12 79.0 174 28.7
Lj6P690T34 Lonicera japonica HOM05D005742 ORTHO05D001888 8.3e-12 77.4 158 25.9
TWI09G1381 Tripterygium wilfordii HOM05D005742 ORTHO05D001888 1.1e-11 77.0 176 29.5
SalBow8G0437 Salvia bowleyana HOM05D005742 ORTHO05D001888 1.4e-11 76.6 170 26.5
SalBow8G4915 Salvia bowleyana HOM05D005742 ORTHO05D001888 1.4e-11 76.6 170 26.5
Duzib151G0239 Durio zibethinus HOM05D005742 ORTHO05D001888 2.4e-11 75.9 129 29.5
MSTRG.24819 Avicennia marina HOM05D005742 ORTHO05D001888 3.2e-11 75.5 160 27.5
Gohir.D02G058775 Gossypium hirsutum HOM05D005742 ORTHO05D001888 4.1e-11 75.1 176 26.1
RcHm_v2.0_Chr4g0424831 Rosa chinensis HOM05D005742 ORTHO05D001888 4.1e-11 75.1 174 27.0
Glyma.15G141100 Glycine max HOM05D005742 ORTHO05D001888 7.0e-11 74.3 127 28.3
Gorai.005G066500 Gossypium raimondii HOM05D005742 ORTHO05D001888 7.0e-11 74.3 163 27.0
Dinv44293 Davidia involucrata HOM05D005742 ORTHO05D001888 1.6e-10 73.2 172 26.7
MBI18_g17308_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 1.6e-10 73.2 154 29.2
TWI53G1179 Tripterygium wilfordii HOM05D005742 ORTHO05D001888 1.6e-10 73.2 168 28.6
Glyma.09G036200 Glycine max HOM05D005742 ORTHO05D001888 2.7e-10 72.4 127 29.1
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 3.5e-10 72.0 163 28.8
FvH4_4g19570 Fragaria vesca HOM05D005742 ORTHO05D001888 3.5e-10 72.0 161 25.5
Cc03_g00920 Coffea canephora HOM05D005742 ORTHO05D001888 4.6e-10 71.6 169 25.4
FAN12G0951 Fragaria x ananassa HOM05D001258 ORTHO05D000158 4.6e-10 71.6 161 25.5
Cpa.g.sc9.68 Carica papaya HOM05D005742 ORTHO05D001888 6.0e-10 71.2 157 24.8
Medtr2g034220 Medicago truncatula HOM05D005742 ORTHO05D001888 7.8e-10 70.9 159 24.5
Migut.G00051 Erythranthe guttata HOM05D005742 ORTHO05D001888 1.0e-09 70.5 180 28.3
VMungo0540G2083 Vigna mungo HOM05D005742 ORTHO05D001888 1.7e-09 69.7 158 24.7
Ca_01851_v3 Cicer arietinum L. HOM05D005742 ORTHO05D001888 2.3e-09 69.3 171 22.2
Gohir.A02G054001 Gossypium hirsutum HOM05D005742 ORTHO05D001888 2.3e-09 69.3 142 26.8
Ciclev10007183m.g Citrus clementina HOM05D005742 ORTHO05D001888 1.1e-08 67.0 160 23.8
Lalb_Chr18g0058731 Lupinus albus HOM05D005742 ORTHO05D001888 1.1e-08 67.0 166 24.7
unitig_0.g2583 Utricularia gibba HOM05D005742 ORTHO05D001888 1.1e-08 67.0 160 26.9
Manes.01G228700 Manihot esculenta HOM05D008182 ORTHO05D001888 2.5e-08 65.9 170 26.5
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 2.5e-08 65.9 161 28.0
Psat1g160600 Pisum sativum HOM05D005742 ORTHO05D001888 3.3e-08 65.5 173 23.1
VMungo0540G0961 Vigna mungo HOM05D005742 ORTHO05D001888 3.3e-08 65.5 158 24.7
Atru.chr4.3013 Acer truncatum HOM05D005742 ORTHO05D001888 5.6e-08 64.7 152 28.3
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 5.6e-08 64.7 182 26.9
MSTRG.21772 Avicennia marina HOM05D005742 ORTHO05D001888 7.3e-08 64.3 160 23.8
DCAR_023352 Daucus carota HOM05D005742 ORTHO05D001888 7.3e-08 64.3 164 25.0
Eucgr.H01005 Eucalyptus grandis HOM05D005742 ORTHO05D001888 7.3e-08 64.3 154 26.6
ATR0796G165 Amborella trichopoda HOM05D005742 ORTHO05D001888 9.5e-08 63.9 166 22.9
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 2.1e-07 62.8 162 26.5
Lalb_Chr20g0120901 Lupinus albus HOM05D005742 ORTHO05D001888 2.1e-07 62.8 170 24.7
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 2.8e-07 62.4 174 24.1
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 2.8e-07 62.4 174 24.1
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 3.6e-07 62.0 161 24.8
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 3.6e-07 62.0 161 24.8
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 3.6e-07 62.0 162 25.9
Actinidia21348 Actinidia chinensis HOM05D008182 ORTHO05D001888 4.7e-07 61.6 131 29.8
arahy.Tifrunner.gnm1.ann1.X5UH65 Arachis hypogaea HOM05D005742 ORTHO05D001888 6.2e-07 61.2 171 27.5
MBI19_g03227_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 6.2e-07 61.2 178 25.3
Lj6g0008349 Lotus japonicus HOM05D005742 ORTHO05D001888 8.0e-07 60.8 166 25.9
Phvul.006G117500 Phaseolus vulgaris HOM05D005742 ORTHO05D001888 8.0e-07 60.8 161 24.2
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 1.8e-06 59.7 179 26.3
Ca_24688_v3 Cicer arietinum L. HOM05D008489 ORTHO05D010677 8.9e-06 57.4 156 26.3


User provided reference genes

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