Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 1.9e-156 555.8 286 100.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 9.4e-156 553.5 285 99.6
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.4e-154 549.7 285 99.3
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 3.7e-96 355.5 176 99.4
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.5e-68 263.8 323 51.4
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 4.3e-60 235.7 311 46.6
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.4e-58 230.7 303 49.2
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.8e-58 230.3 260 53.5
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 2.2e-56 223.4 274 50.4
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.7e-52 208.8 323 45.2
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.7e-52 208.8 323 45.2
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 3.4e-49 199.5 296 46.6
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.6e-46 190.7 291 45.0
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.0e-45 188.0 307 40.4
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 5.5e-39 165.6 212 49.1
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.6e-38 162.9 257 42.8
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 7.9e-38 161.8 212 48.6
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.0e-37 159.8 215 45.1
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.9e-37 159.5 211 46.0
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 2.0e-36 157.1 297 39.7
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.3e-36 156.4 194 52.1
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 4.4e-36 156.0 203 47.8
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.3e-35 154.5 310 36.1
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.8e-34 150.6 353 35.1
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 7.7e-33 145.2 219 45.7
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 1.7e-32 144.1 285 36.1
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.7e-32 144.1 285 36.1
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.7e-32 144.1 285 36.1
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 5.5e-31 139.0 127 59.8
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 1.0e-29 134.8 266 35.3
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 1.3e-27 127.9 306 35.9
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 8.2e-27 125.2 259 38.6
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.6e-25 120.9 145 52.4
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 1.6e-25 120.9 145 52.4
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 2.0e-25 120.6 145 52.4
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 2.7e-25 120.2 174 45.4
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 7.7e-25 118.6 128 57.8
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 5.0e-24 115.9 285 32.6
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.1e-22 110.5 126 46.8
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.1e-22 110.5 153 44.4
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 3.0e-21 106.7 199 39.2
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 1.8e-18 97.4 192 37.5
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 1.8e-18 97.4 107 49.5
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.9e-16 90.1 94 52.1
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 7.2e-15 85.5 114 45.6
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 1.6e-14 84.3 147 40.1
MBI08_g41351_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D010233 1.6e-14 84.3 113 40.7
PSO541G2875 Papaver somniferum HOM05D001070 ORTHO05D002096 6.1e-14 82.4 50 84.0
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 1.0e-13 81.6 126 38.9
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 1.0e-13 81.6 146 40.4
Eucgr.I00434 Eucalyptus grandis HOM05D001070 ORTHO05D010233 4.0e-13 79.7 132 40.9
Psat0s1160g0280 Pisum sativum HOM05D001070 ORTHO05D002096 5.2e-13 79.3 237 28.7
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 8.8e-13 78.6 203 31.5
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 1.5e-12 77.8 135 37.0
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 7.5e-12 75.5 90 48.9
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 9.8e-12 75.1 76 51.3
CsaV3_1G025500 Cucumis sativus L. HOM05D001070 ORTHO05D010233 2.2e-11 73.9 104 45.2
Psat5g037720 Pisum sativum HOM05D001070 ORTHO05D010233 2.2e-11 73.9 218 28.0
GSVIVG01009552001 Vitis vinifera HOM05D001070 ORTHO05D010233 1.4e-10 71.2 100 43.0
Solyc10g049470.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.8e-10 70.9 100 50.0
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.4e-10 70.5 60 56.7
AUR62015545 Chenopodium quinoa HOM05D000533 ORTHO05D001069 5.4e-10 69.3 101 42.6
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 7.0e-10 68.9 101 45.5
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 3.5e-09 66.6 52 61.5
LjContig00318g0026726 Lotus japonicus HOM05D000445 ORTHO05D000314 5.9e-09 65.9 83 42.2
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 5.9e-09 65.9 54 57.4
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.0e-08 65.1 65 53.8
Peaxi162Scf00080g00522 Petunia axillaris HOM05D001070 ORTHO05D022991 1.3e-08 64.7 183 33.9
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 3.8e-08 63.2 170 31.2
Eucgr.L00730 Eucalyptus grandis HOM05D001070 ORTHO05D010233 1.5e-07 61.2 66 54.5
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.9e-07 60.8 47 59.6
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 3.3e-07 60.1 53 56.6
Migut.G01153 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.6e-06 57.8 170 30.6
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.6e-06 57.8 47 57.4
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 1.6e-06 57.8 115 35.7
Sc18g0005530 Simmondsia chinensis HOM05D001070 ORTHO05D010233 1.6e-06 57.8 47 63.8
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 3.6e-06 56.6 99 41.4
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 4.7e-06 56.2 47 57.4
Sed0020476 Sechium edule HOM05D020378 ORTHO05D010652 4.7e-06 56.2 50 48.0
AUR62014094 Chenopodium quinoa HOM05D000216 ORTHO05D000634 6.1e-06 55.8 87 41.4


User provided reference genes

Program Settings