Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0025 Papaver somniferum HOM05D034346 ORTHO05D001345 0.0e+00 1091.3 585 100.0
PSO170G1182 Papaver somniferum HOM05D034346 ORTHO05D001345 8.0e-170 601.3 379 90.2
PSO170G1504 Papaver somniferum HOM05D034346 ORTHO05D001345 3.7e-42 177.2 103 90.3
MBI07_g42070_MAGBIO Magnolia biondii HOM05D007981 ORTHO05D001345 3.0e-23 114.4 263 41.1
Hma1.2p1_0662F.1_g198260 Hydrangea macrophylla HOM05D007981 ORTHO05D001345 9.6e-22 109.4 483 32.7
GSVIVG01031362001 Vitis vinifera HOM05D007981 ORTHO05D001345 4.8e-21 107.1 501 32.9
Thecc.09G196000 Theobroma cacao HOM05D007981 ORTHO05D001345 1.8e-20 105.1 299 37.1
Ciclev10017970m.g Citrus clementina HOM05D007981 ORTHO05D001345 2.4e-20 104.8 336 34.8
TAR633G1356 Trochodendron aralioides HOM05D007981 ORTHO05D001345 3.1e-20 104.4 254 39.0
Prupe.6G365700 Prunus persica HOM05D007981 ORTHO05D001345 9.0e-20 102.8 271 36.2
Gohir.D05G001500 Gossypium hirsutum HOM05D007981 ORTHO05D001345 8.4e-18 96.3 152 46.1
Atru.chr10.126 Acer truncatum HOM05D007981 ORTHO05D001345 9.3e-17 92.8 386 32.1
ECA246G2938 Erigeron canadensis HOM05D007981 ORTHO05D001345 2.7e-16 91.3 412 31.1
Migut.G01327 Erythranthe guttata HOM05D007981 ORTHO05D001345 4.6e-16 90.5 409 29.1
Cc09_g04330 Coffea canephora HOM05D007981 ORTHO05D001345 2.3e-15 88.2 425 29.2
Migut.G01306 Erythranthe guttata HOM05D007981 ORTHO05D001345 3.0e-15 87.8 405 28.9
Actinidia19656 Actinidia chinensis HOM05D007981 ORTHO05D001345 5.1e-15 87.0 430 31.6
CSS0007963 Camellia sinensis var. sinensis HOM05D007981 ORTHO05D001345 6.6e-15 86.7 528 28.0
Migut.G01332 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.5e-14 85.5 279 34.8
Oeu022685.1 Olea europaea HOM05D007981 ORTHO05D001345 1.5e-14 85.5 452 29.0
Manes.12G000800 Manihot esculenta HOM05D007981 ORTHO05D001345 2.5e-14 84.7 417 29.3
Os09g0518600 Oryza sativa ssp. japonica HOM05D007981 ORTHO05D001345 7.3e-14 83.2 119 47.9
MBI07_g10349_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.3e-13 82.4 89 56.2
Gorai.009G001400 Gossypium raimondii HOM05D007981 ORTHO05D001345 3.6e-13 80.9 335 31.9
TAR636G1519 Trochodendron aralioides HOM05D007981 ORTHO05D001345 3.6e-13 80.9 477 31.7
MELO3C005819.2 Cucumis melo HOM05D007981 ORTHO05D001345 8.1e-13 79.7 444 29.5
Dinv03280 Davidia involucrata HOM05D007981 ORTHO05D001345 1.1e-12 79.3 63 69.8
Migut.A01091 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.8e-12 78.6 411 28.0
Lsat_1_v5_gn_3_25100 Lactuca sativa HOM05D007981 ORTHO05D001345 2.4e-12 78.2 476 27.5
SalBow1G1067 Salvia bowleyana HOM05D007981 ORTHO05D001345 3.1e-12 77.8 154 40.9
SalBow1G7719 Salvia bowleyana HOM05D007981 ORTHO05D001345 3.1e-12 77.8 154 40.9
Phvul.011G197200 Phaseolus vulgaris HOM05D007981 ORTHO05D001345 2.6e-11 74.7 417 28.1
PGR031G0831 Punica granatum HOM05D007981 ORTHO05D001345 2.6e-11 74.7 413 30.5
Ah.10g036510 Amaranthus hybridus HOM05D001930 ORTHO05D001345 4.5e-11 73.9 164 35.4
PGSC0003DMG400042123 Solanum tuberosum HOM05D007981 ORTHO05D001345 4.5e-11 73.9 417 30.5
FvH4_6g00040 Fragaria vesca HOM05D007981 ORTHO05D001345 1.7e-10 72.0 436 26.8
Gohir.A05G001200 Gossypium hirsutum HOM05D007981 ORTHO05D001345 1.7e-10 72.0 299 31.8
Peaxi162Scf00344g00031 Petunia axillaris HOM05D007981 ORTHO05D001345 1.7e-10 72.0 495 26.9
SalBow2G2157 Salvia bowleyana HOM05D007981 ORTHO05D001345 2.2e-10 71.6 326 30.4
Solyc11g008840.3 Solanum lycopersicum HOM05D007981 ORTHO05D001345 2.2e-10 71.6 397 29.2
TWI36G0229 Tripterygium wilfordii HOM05D007981 ORTHO05D001345 2.9e-10 71.2 499 28.1
EL10Ac2g04813 Beta vulgaris HOM05D001930 ORTHO05D001345 3.8e-10 70.9 155 36.1
ClCG01G001160 Citrullus lanatus HOM05D007981 ORTHO05D001345 3.8e-10 70.9 447 30.4
CAN.G691.25 Capsicum annuum HOM05D007981 ORTHO05D001345 4.9e-10 70.5 434 30.4
Glyma.15G228000 Glycine max HOM05D007981 ORTHO05D001345 4.9e-10 70.5 331 28.7
FAN09G0734 Fragaria x ananassa HOM05D007981 ORTHO05D001345 6.4e-10 70.1 437 26.5
Rhsim05G0162500 Rhododendron simsii HOM05D007981 ORTHO05D001345 8.4e-10 69.7 496 27.2
Lj3g0009424 Lotus japonicus HOM05D007981 ORTHO05D001345 1.1e-09 69.3 415 28.0
VMungo1127G1819 Vigna mungo HOM05D007981 ORTHO05D001345 1.9e-09 68.6 395 28.6
arahy.Tifrunner.gnm1.ann1.8NJ4D9 Arachis hypogaea HOM05D007981 ORTHO05D001345 4.2e-09 67.4 413 27.6
Migut.G01299 Erythranthe guttata HOM05D007981 ORTHO05D001345 5.4e-09 67.0 421 29.2
Ah.16g103400 Amaranthus hybridus HOM05D001930 ORTHO05D001345 7.1e-09 66.6 158 34.8
AUR62022866 Chenopodium quinoa HOM05D001930 ORTHO05D001345 7.1e-09 66.6 157 33.8
AUR62012234 Chenopodium quinoa HOM05D001930 ORTHO05D001345 9.3e-09 66.2 119 37.0
Os08g0543000 Oryza sativa ssp. japonica HOM05D007981 ORTHO05D001345 9.3e-09 66.2 196 29.1
Aqoxy1G01338 Aquilegia oxysepala HOM05D007981 ORTHO05D001345 1.6e-08 65.5 575 27.8
arahy.Tifrunner.gnm1.ann1.26SKGH Arachis hypogaea HOM05D007981 ORTHO05D001345 1.6e-08 65.5 416 27.6
Migut.G01304 Erythranthe guttata HOM05D007981 ORTHO05D001345 1.6e-08 65.5 323 30.7
Migut.G01343 Erythranthe guttata HOM05D007981 ORTHO05D001345 2.1e-08 65.1 403 27.0
Glyma.02G256600 Glycine max HOM05D001930 ORTHO05D001345 2.1e-08 65.1 122 38.5
Glyma.14G060100 Glycine max HOM05D001930 ORTHO05D001345 2.7e-08 64.7 141 39.7
SGA_v2.0_scaffold60G20991 Striga asiatica HOM05D001930 ORTHO05D001345 4.6e-08 63.9 157 38.2
Zm00001eb037390 Zea mays HOM05D007981 ORTHO05D001345 4.6e-08 63.9 139 33.1
Sed0005322 Sechium edule HOM05D007981 ORTHO05D001345 6.0e-08 63.5 294 31.6
HPP92_001255 Vanilla planifolia HOM05D007981 ORTHO05D001345 7.9e-08 63.2 163 34.4
Dinv17980 Davidia involucrata HOM05D001930 ORTHO05D001345 1.0e-07 62.8 163 35.0
Lalb_Chr10g0105111 Lupinus albus HOM05D001930 ORTHO05D001345 1.3e-07 62.4 113 39.8
Medtr8g040940 Medicago truncatula HOM05D007981 ORTHO05D001345 1.3e-07 62.4 415 26.7
TAR369G0785 Trochodendron aralioides HOM05D001930 ORTHO05D001345 1.3e-07 62.4 157 34.4
MBI14_g28262_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.8e-07 62.0 163 34.4
Psat4g190600 Pisum sativum HOM05D007981 ORTHO05D001345 1.8e-07 62.0 249 28.5
Psat5g126440 Pisum sativum HOM05D001930 ORTHO05D001345 1.8e-07 62.0 136 36.0
ATR0618G241 Amborella trichopoda HOM05D001930 ORTHO05D001345 3.0e-07 61.2 165 32.7
Lj1A953G44 Lonicera japonica HOM05D001930 ORTHO05D001345 3.0e-07 61.2 164 32.3
Mapoly0001s0565 Marchantia polymorpha HOM05D003830 ORTHO05D004446 3.0e-07 61.2 181 34.8
TPR.G2544 Trifolium pratense HOM05D001930 ORTHO05D001345 3.9e-07 60.8 175 31.4
Cpa.g.sc19.190 Carica papaya HOM05D001930 ORTHO05D001345 5.1e-07 60.5 157 32.5
Thecc.10G020700 Theobroma cacao HOM05D001930 ORTHO05D001345 5.1e-07 60.5 181 31.5
Lj6C822T9 Lonicera japonica HOM05D003830 ORTHO05D004446 6.7e-07 60.1 91 42.9
ECA233G1150 Erigeron canadensis HOM05D001930 ORTHO05D001345 8.7e-07 59.7 127 33.9
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea HOM05D001930 ORTHO05D001345 1.1e-06 59.3 120 37.5
Medtr3g070300 Medicago truncatula HOM05D001930 ORTHO05D001345 1.1e-06 59.3 201 31.3
Eucgr.H04665 Eucalyptus grandis HOM05D003830 ORTHO05D004446 1.5e-06 58.9 107 42.1
Hma1.2p1_1340F.1_g276740 Hydrangea macrophylla HOM05D003830 ORTHO05D004446 1.5e-06 58.9 100 41.0
Ca_15267_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 1.9e-06 58.5 163 33.7
Glyma.11G228400 Glycine max HOM05D001930 ORTHO05D001345 1.9e-06 58.5 174 33.9
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea HOM05D001930 ORTHO05D001345 2.5e-06 58.2 118 33.9
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 2.5e-06 58.2 169 32.5
Actinidia25761 Actinidia chinensis HOM05D003830 ORTHO05D004446 4.3e-06 57.4 163 33.1
CANSAT64G1967 Cannabis sativa HOM05D063274 ORTHO05D001345 4.3e-06 57.4 113 38.1
Ciclev10011390m.g Citrus clementina HOM05D001930 ORTHO05D001345 4.3e-06 57.4 177 31.6
Duzib128G0280 Durio zibethinus HOM05D001930 ORTHO05D001345 4.3e-06 57.4 146 34.2
VMungo1383G0091 Vigna mungo HOM05D001930 ORTHO05D001345 4.3e-06 57.4 156 35.3
Duzib268G1283 Durio zibethinus HOM05D003830 ORTHO05D004446 5.6e-06 57.0 104 39.4
unitig_46.g18737 Utricularia gibba HOM05D001930 ORTHO05D001345 5.6e-06 57.0 248 30.2
Actinidia29110 Actinidia chinensis HOM05D001930 ORTHO05D001345 7.4e-06 56.6 113 38.9
Eucgr.G03055 Eucalyptus grandis HOM05D001930 ORTHO05D001345 7.4e-06 56.6 114 35.1
Glyma.18G028700 Glycine max HOM05D001930 ORTHO05D001345 7.4e-06 56.6 167 32.3
A08p26030 Brassica napus HOM05D003830 ORTHO05D004446 9.6e-06 56.2 155 32.9
HanXRQChr12g0370531 Helianthus annuus HOM05D001930 ORTHO05D001345 9.6e-06 56.2 113 34.5
Rhsim03G0142000 Rhododendron simsii HOM05D001930 ORTHO05D001345 9.6e-06 56.2 165 31.5


User provided reference genes

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