Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 5.7e-197 691.0 430 100.0
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 6.3e-188 661.0 436 95.6
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 2.4e-107 393.3 428 52.3
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 3.1e-102 376.3 411 53.3
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 8.7e-97 358.2 389 51.2
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 2.8e-95 353.2 392 52.6
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 9.0e-94 348.2 391 49.6
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 1.1e-91 341.3 388 50.0
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 3.5e-90 336.3 388 50.0
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 6.0e-90 335.5 384 51.3
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.9e-88 330.5 377 49.9
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 9.6e-88 328.2 378 51.3
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 1.6e-87 327.4 423 47.3
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 3.7e-87 326.2 388 49.2
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 1.8e-86 323.9 381 48.6
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 9.0e-86 321.6 377 50.1
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 1.2e-85 321.2 375 49.6
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.5e-85 320.9 389 48.8
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 4.5e-85 319.3 387 47.8
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 5.8e-85 318.9 389 49.1
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.8e-85 318.9 389 49.1
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 5.8e-85 318.9 390 49.0
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 1.3e-84 317.8 366 50.0
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 3.8e-84 316.2 390 47.4
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 5.0e-84 315.8 366 49.7
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 1.9e-83 313.9 399 47.4
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.2e-83 313.2 415 46.7
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 4.2e-83 312.8 389 47.8
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 7.1e-83 312.0 417 45.6
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 3.5e-82 309.7 387 48.1
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 6.7e-81 305.4 350 50.3
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 1.5e-80 304.3 402 47.8
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.9e-80 303.9 388 46.9
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 1.9e-80 303.9 390 45.4
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 5.7e-80 302.4 392 46.7
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 9.7e-80 301.6 394 48.2
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 2.2e-79 300.4 325 52.3
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 2.2e-79 300.4 377 48.8
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 8.2e-79 298.5 382 46.6
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 1.4e-78 297.7 388 46.6
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 1.8e-78 297.4 382 46.3
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 4.1e-78 296.2 383 47.5
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 6.9e-78 295.4 393 43.8
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 4.5e-77 292.7 389 46.0
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 5.9e-77 292.4 383 46.5
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 6.5e-76 288.9 350 46.9
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 4.2e-75 286.2 390 45.1
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 4.2e-75 286.2 371 45.6
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 5.5e-75 285.8 383 43.9
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 1.2e-74 284.6 378 44.2
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 6.1e-74 282.3 405 44.9
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 6.1e-74 282.3 318 49.4
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 7.9e-74 282.0 381 59.6
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 7.9e-74 282.0 379 44.6
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 1.0e-73 281.6 390 43.8
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 1.8e-73 280.8 387 43.9
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 1.8e-73 280.8 321 50.8
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 2.3e-73 280.4 378 43.4
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 6.7e-73 278.9 388 44.3
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 8.8e-73 278.5 389 43.4
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 2.2e-71 273.9 341 47.8
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 2.8e-71 273.5 335 47.8
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 3.7e-71 273.1 408 41.7
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 6.3e-71 272.3 313 48.6
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 1.1e-70 271.6 340 48.5
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.8e-70 270.8 388 43.3
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.8e-70 270.8 326 47.9
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 3.1e-70 270.0 371 45.6
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 3.1e-70 270.0 400 42.2
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 1.5e-69 267.7 376 45.2
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 5.5e-67 259.2 329 45.0
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 1.4e-65 254.6 411 40.4
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 9.7e-64 248.4 274 51.5
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 3.1e-62 243.4 435 37.5
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 2.9e-60 236.9 306 48.4
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 1.1e-59 235.0 312 46.8
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.1e-54 218.4 388 38.4
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 7.0e-54 215.7 247 50.2
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 5.0e-52 209.5 447 36.5
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 1.1e-51 208.4 150 68.7
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 1.6e-50 204.5 298 40.6
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 2.1e-50 204.1 151 68.2
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 4.4e-48 196.4 390 39.5
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 5.7e-48 196.1 389 37.0
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 1.7e-47 194.5 394 40.4
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 1.8e-46 191.0 143 69.2
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 2.0e-45 187.6 207 52.7
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 1.0e-41 175.3 414 31.2
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 1.4e-41 174.9 308 39.9
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 1.2e-40 171.8 324 34.0
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.0e-36 158.7 118 69.5
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 8.6e-36 155.6 121 66.9
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 3.6e-34 150.2 119 65.5
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 2.9e-31 140.6 100 72.0
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.1e-30 138.7 186 44.6
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 7.0e-30 136.0 186 44.1
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 2.9e-28 130.6 130 55.4
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 3.7e-23 113.6 164 42.7
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 1.3e-20 105.1 166 41.0
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 4.3e-19 100.1 83 62.7
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 3.4e-16 90.5 155 38.1
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 4.4e-16 90.1 77 50.6
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 2.8e-10 70.9 66 60.6
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 2.0e-08 64.7 71 45.1
Nitab4.5_0000499g0130 Nicotiana tabacum HOM05D007236 ORTHO05D009150 4.4e-08 63.5 56 57.1
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 5.4e-06 56.6 33 81.8


User provided reference genes

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