Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 9.9e-297 1022.7 520 100.0
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 1.2e-286 989.2 520 96.0
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 7.8e-193 677.6 518 68.9
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.6e-188 662.5 514 67.9
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 3.4e-180 635.6 504 66.1
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 2.2e-179 632.9 519 64.5
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 2.7e-177 625.9 507 65.3
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 7.9e-177 624.4 505 64.0
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.3e-176 623.6 523 63.7
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 3.0e-176 622.5 527 63.6
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 3.0e-176 622.5 502 64.7
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 3.9e-176 622.1 502 64.7
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 3.9e-176 622.1 470 67.4
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 5.1e-176 621.7 514 63.2
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 8.7e-176 620.9 504 63.3
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.5e-175 620.2 527 63.0
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 2.5e-175 619.4 504 64.1
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 3.3e-175 619.0 513 63.0
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 4.3e-175 618.6 518 63.3
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 9.6e-175 617.5 514 63.4
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.8e-174 615.9 518 63.3
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 4.8e-174 615.1 513 63.5
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 4.8e-174 615.1 507 64.7
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 6.2e-174 614.8 503 63.0
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.1e-173 614.0 503 64.0
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.4e-173 613.6 492 64.6
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.8e-173 613.2 503 64.2
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 2.4e-173 612.8 522 62.6
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.4e-173 612.8 492 64.4
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 4.0e-173 612.1 474 65.6
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.5e-172 610.1 467 67.0
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 4.5e-172 608.6 492 64.2
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.5e-172 608.6 503 63.8
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 5.8e-172 608.2 518 62.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 5.8e-172 608.2 492 64.4
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.7e-171 606.7 519 62.0
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 2.2e-171 606.3 467 65.5
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 2.9e-171 605.9 526 62.0
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 2.7e-169 599.4 472 65.9
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 6.0e-169 598.2 550 59.8
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.3e-168 597.0 461 65.1
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.8e-168 596.7 503 62.2
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 3.0e-168 595.9 519 61.3
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.9e-167 593.2 429 69.5
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 2.5e-167 592.8 520 60.8
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 2.5e-167 592.8 484 65.1
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 4.3e-167 592.0 514 59.9
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 5.7e-167 591.7 465 65.6
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.3e-166 590.5 465 65.4
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 1.6e-166 590.1 468 64.7
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 4.8e-166 588.6 514 59.7
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 6.2e-166 588.2 520 61.0
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 6.2e-166 588.2 488 63.7
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 8.2e-166 587.8 465 65.6
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.1e-165 587.4 521 61.0
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 1.1e-165 587.4 503 61.0
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 1.4e-165 587.0 486 63.8
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.8e-165 586.6 444 65.8
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.9e-165 584.7 518 61.2
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 2.6e-164 582.8 467 62.3
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 5.8e-164 581.6 460 66.5
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 2.2e-163 579.7 457 66.5
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 1.4e-162 577.0 515 59.8
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 5.5e-162 575.1 449 64.1
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 7.1e-162 574.7 452 65.9
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.6e-161 573.5 467 64.0
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 2.5e-159 566.2 457 63.7
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 6.3e-158 561.6 482 61.8
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.1e-157 560.8 457 64.1
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.4e-157 559.7 451 62.7
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 3.1e-157 559.3 525 58.1
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 5.3e-157 558.5 449 61.2
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.3e-157 558.5 476 62.6
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 1.2e-156 557.4 453 65.3
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 7.7e-156 554.7 457 63.9
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.2e-155 553.1 444 64.9
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 2.9e-155 552.7 402 67.2
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 2.5e-154 549.7 495 57.6
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 3.2e-154 549.3 451 62.5
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 4.2e-154 548.9 468 59.4
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 9.4e-154 547.7 525 56.2
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 2.7e-153 546.2 454 61.5
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 3.6e-153 545.8 453 61.1
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 6.1e-153 545.0 455 60.2
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 7.9e-153 544.7 461 60.5
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 7.9e-153 544.7 402 66.7
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 5.1e-152 542.0 429 63.2
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 7.4e-151 538.1 472 58.1
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 2.2e-150 536.6 423 62.9
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 3.1e-149 532.7 513 55.4
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 6.9e-149 531.6 492 59.1
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.9e-146 523.5 521 53.9
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.0e-139 501.1 399 62.9
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.1e-138 497.7 382 66.2
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 4.2e-130 469.2 422 56.4
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 4.7e-129 465.7 426 56.6
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 1.5e-127 460.7 355 64.5
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 4.1e-125 452.6 431 54.5
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.2e-111 407.9 392 56.1
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 6.6e-107 392.1 346 58.4
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.6e-103 380.2 302 65.9
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.2e-100 371.3 425 44.9
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 3.4e-95 353.2 257 66.5
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 3.1e-80 303.5 436 40.4
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.7e-78 297.7 424 44.1
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.6e-76 289.7 273 60.4
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.6e-68 263.1 250 60.0
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 6.7e-59 232.6 440 34.1
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 1.1e-58 231.9 152 74.3
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 3.4e-55 220.3 440 32.3
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 1.3e-51 208.4 136 77.2
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.9e-45 188.0 171 55.0
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 1.2e-31 142.1 128 60.2
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.0e-30 139.0 228 39.5
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 3.8e-30 137.1 127 59.1
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 2.1e-28 131.3 228 36.8
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 1.1e-24 119.0 220 33.2
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 4.2e-21 107.1 89 62.9
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 1.6e-12 78.6 89 43.8


User provided reference genes

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