Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO349G0211 Papaver somniferum HOM05D000542 ORTHO05D020956 5.5e-56 220.7 109 100.0
PSO765G0175 Papaver somniferum HOM05D000542 ORTHO05D000202 2.4e-27 125.6 158 47.5
PSO349G0116 Papaver somniferum HOM05D000542 ORTHO05D020956 1.5e-24 116.3 131 51.9
PSO349G0085 Papaver somniferum HOM05D000542 ORTHO05D000202 7.0e-19 97.4 193 37.8
PSO765G0201 Papaver somniferum HOM05D000542 ORTHO05D000202 9.2e-19 97.1 197 36.5
PSO349G0321 Papaver somniferum HOM05D000542 ORTHO05D020956 2.9e-17 92.0 129 42.6
PSO765G0058 Papaver somniferum HOM05D000542 ORTHO05D020956 6.6e-17 90.9 76 67.1
PSO349G0101 Papaver somniferum HOM05D000542 ORTHO05D020956 1.9e-16 89.4 64 68.8
Medtr3g109490 Medicago truncatula HOM05D000542 ORTHO05D000202 1.6e-10 69.7 106 36.8
TPR.G12129 Trifolium pratense HOM05D000542 ORTHO05D000202 2.0e-10 69.3 100 37.0
Manes.03G125551 Manihot esculenta HOM05D000542 ORTHO05D000202 4.6e-10 68.2 118 38.1
Psat6g033920 Pisum sativum HOM05D000542 ORTHO05D000202 7.8e-10 67.4 120 35.0
TPR.G11992 Trifolium pratense HOM05D000542 ORTHO05D000202 1.0e-09 67.0 120 33.3
GSVIVG01035682001 Vitis vinifera HOM05D000542 ORTHO05D000202 1.7e-09 66.2 101 39.6
Psat6g034000 Pisum sativum HOM05D000542 ORTHO05D000202 2.3e-09 65.9 84 41.7
Manes.03G128100 Manihot esculenta HOM05D000542 ORTHO05D000202 3.0e-09 65.5 117 37.6
Medtr1g008590 Medicago truncatula HOM05D000542 ORTHO05D000202 3.9e-09 65.1 132 32.6
PSO832G1436 Papaver somniferum HOM05D000542 ORTHO05D000202 5.0e-09 64.7 132 32.6
Hma1.2p1_0003F.1_g003730 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 8.6e-09 63.9 121 34.7
TPR.G12091 Trifolium pratense HOM05D000542 ORTHO05D000202 8.6e-09 63.9 88 39.8
COL.COLO4_18705 Corchorus olitorius HOM05D000542 ORTHO05D000202 1.1e-08 63.5 109 32.1
Actinidia15724 Actinidia chinensis HOM05D000542 ORTHO05D000202 1.5e-08 63.2 118 36.4
Oeu027032.1 Olea europaea HOM05D000542 ORTHO05D000202 1.9e-08 62.8 98 40.8
Sabra18G0037300 Salix brachista HOM05D000542 ORTHO05D000202 3.3e-08 62.0 112 33.9
TPR.G12105 Trifolium pratense HOM05D000542 ORTHO05D000202 3.3e-08 62.0 106 34.9
MSTRG.25897 Avicennia marina HOM05D000542 ORTHO05D000202 4.3e-08 61.6 141 31.2
arahy.Tifrunner.gnm1.ann1.04D7UL Arachis hypogaea HOM05D000542 ORTHO05D000202 5.6e-08 61.2 109 39.4
Medtr0312s0030 Medicago truncatula HOM05D000542 ORTHO05D000202 5.6e-08 61.2 125 30.4
Medtr1g007520 Medicago truncatula HOM05D000542 ORTHO05D000202 5.6e-08 61.2 125 30.4
Medtr1g008560 Medicago truncatula HOM05D000542 ORTHO05D000202 9.5e-08 60.5 133 32.3
Os05g0217800 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 9.5e-08 60.5 102 37.3
SalBow4G2992 Salvia bowleyana HOM05D000542 ORTHO05D000202 1.6e-07 59.7 149 30.9
Medtr1g008450 Medicago truncatula HOM05D000542 ORTHO05D000202 2.8e-07 58.9 115 33.9
GSVIVG01035705001 Vitis vinifera HOM05D000542 ORTHO05D020956 2.8e-07 58.9 92 37.0
CARHR187730 Cardamine hirsuta HOM05D000542 ORTHO05D000202 4.7e-07 58.2 96 38.5
Os05g0215000 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 4.7e-07 58.2 98 35.7
Os05g0217700 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D020956 4.7e-07 58.2 102 35.3
Glyma.14G140900 Glycine max HOM05D000542 ORTHO05D000202 8.0e-07 57.4 153 28.1
Manes.03G125200 Manihot esculenta HOM05D000542 ORTHO05D000202 8.0e-07 57.4 114 34.2
HPP92_003937 Vanilla planifolia HOM05D000542 ORTHO05D000202 8.0e-07 57.4 140 30.0
arahy.Tifrunner.gnm1.ann1.39ZYJP Arachis hypogaea HOM05D000542 ORTHO05D000202 1.1e-06 57.0 126 34.1
Hma1.2p1_0450F.1_g155650 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.1e-06 57.0 129 31.8
Lalb_Chr24g0402641 Lupinus albus HOM05D000542 ORTHO05D000202 1.1e-06 57.0 109 33.9
Medtr1g008470 Medicago truncatula HOM05D000542 ORTHO05D000202 1.1e-06 57.0 109 36.7
Glyma.06G081100 Glycine max HOM05D000542 ORTHO05D000202 1.4e-06 56.6 131 29.8
Manes.16G066600 Manihot esculenta HOM05D000542 ORTHO05D000202 1.4e-06 56.6 106 34.0
Sabra04G0081900 Salix brachista HOM05D000542 ORTHO05D000202 1.4e-06 56.6 87 39.1
Atru.chr7.2290 Acer truncatum HOM05D000542 ORTHO05D000202 1.8e-06 56.2 126 31.7
Medtr1g008460 Medicago truncatula HOM05D000542 ORTHO05D000202 1.8e-06 56.2 109 34.9
DCAR_004509 Daucus carota HOM05D000542 ORTHO05D000202 2.3e-06 55.8 100 33.0
GSVIVG01015390001 Vitis vinifera HOM05D000542 ORTHO05D000202 2.3e-06 55.8 131 29.8
HanXRQChr13g0420961 Helianthus annuus HOM05D000542 ORTHO05D000202 3.1e-06 55.5 131 27.5
MBI04_g22004_MAGBIO Magnolia biondii HOM05D000542 ORTHO05D000202 3.1e-06 55.5 121 31.4
Glyma.14G141000 Glycine max HOM05D000542 ORTHO05D000202 5.2e-06 54.7 163 27.6
Gorai.009G074500 Gossypium raimondii HOM05D000542 ORTHO05D000202 5.2e-06 54.7 109 33.9
Gohir.D05G050700 Gossypium hirsutum HOM05D000542 ORTHO05D000202 6.8e-06 54.3 122 27.0
Gorai.009G052200 Gossypium raimondii HOM05D000542 ORTHO05D000202 6.8e-06 54.3 122 27.0
Manes.03G125800 Manihot esculenta HOM05D000542 ORTHO05D000202 6.8e-06 54.3 119 34.5
Peaxi162Scf00276g00093 Petunia axillaris HOM05D000542 ORTHO05D000202 6.8e-06 54.3 88 35.2
Cc08_g08890 Coffea canephora HOM05D000542 ORTHO05D000202 8.9e-06 53.9 122 36.1
QL12p026208 Quercus lobata HOM05D000542 ORTHO05D000202 8.9e-06 53.9 159 28.9


User provided reference genes

Program Settings