Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO349G0135 Papaver somniferum HOM05D006986 ORTHO05D008714 2.6e-62 241.9 123 100.0
PSO765G0136 Papaver somniferum HOM05D006986 ORTHO05D008714 4.8e-40 167.9 166 64.5
PSO170G2557 Papaver somniferum HOM05D006986 ORTHO05D008714 3.1e-23 112.1 155 48.4
PSO339G5371 Papaver somniferum HOM05D006986 ORTHO05D008714 5.0e-21 104.8 153 48.4
TAR633G1018 Trochodendron aralioides HOM05D006986 ORTHO05D008714 8.8e-18 94.0 118 49.2
Haze_24406 Corylus avellana HOM05D006986 ORTHO05D008714 8.2e-16 87.4 100 50.0
Nn2g10992 Nelumbo nucifera HOM05D006986 ORTHO05D008714 8.2e-16 87.4 106 50.9
GSVIVG01024640001 Vitis vinifera HOM05D006986 ORTHO05D008714 8.2e-16 87.4 125 43.2
Atru.chr3.4128 Acer truncatum HOM05D006986 ORTHO05D008714 1.1e-15 87.0 103 45.6
Sopen03g028830 Solanum pennellii HOM05D006986 ORTHO05D008714 2.4e-15 85.9 129 45.7
Solyc03g098130.3 Solanum lycopersicum HOM05D006986 ORTHO05D008714 3.1e-15 85.5 123 45.5
TAR636G2132 Trochodendron aralioides HOM05D006986 ORTHO05D008714 5.3e-15 84.7 133 45.9
DCAR_007347 Daucus carota HOM05D006986 ORTHO05D008714 9.1e-15 84.0 101 50.5
Manes.18G142700 Manihot esculenta HOM05D006986 ORTHO05D008714 9.1e-15 84.0 119 43.7
Sed0010409 Sechium edule HOM05D006986 ORTHO05D008714 9.1e-15 84.0 119 45.4
Dinv28693 Davidia involucrata HOM05D006986 ORTHO05D008714 1.5e-14 83.2 104 49.0
Thecc.09G357000 Theobroma cacao HOM05D006986 ORTHO05D008714 1.5e-14 83.2 113 45.1
Duzib168G0630 Durio zibethinus HOM05D006986 ORTHO05D008714 2.0e-14 82.8 104 49.0
PGSC0003DMG401031052 Solanum tuberosum HOM05D006986 ORTHO05D008714 2.0e-14 82.8 81 54.3
COL.COLO4_11142 Corchorus olitorius HOM05D006986 ORTHO05D008714 3.4e-14 82.0 80 53.8
Lsat_1_v5_gn_8_111400 Lactuca sativa HOM05D006986 ORTHO05D008714 1.3e-13 80.1 66 59.1
Lalb_Chr15g0083221 Lupinus albus HOM05D006986 ORTHO05D008714 1.3e-13 80.1 114 45.6
CDE06G1764 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 1.7e-13 79.7 152 39.5
RcHm_v2.0_Chr5g0071561 Rosa chinensis HOM05D006986 ORTHO05D008714 1.7e-13 79.7 96 46.9
ClCG03G000370 Citrullus lanatus HOM05D006986 ORTHO05D008714 2.2e-13 79.3 116 44.0
MELO3C020513.2 Cucumis melo HOM05D006986 ORTHO05D008714 2.2e-13 79.3 120 42.5
Cfa011771 Carpinus fangiana HOM05D006986 ORTHO05D008714 2.9e-13 79.0 81 53.1
CDE07G1909 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 2.9e-13 79.0 150 40.0
FAN25G2061 Fragaria x ananassa HOM05D006986 ORTHO05D008714 3.8e-13 78.6 79 51.9
Aqoxy1G01299 Aquilegia oxysepala HOM05D006986 ORTHO05D008714 5.0e-13 78.2 75 57.3
CAN.G637.24 Capsicum annuum HOM05D006986 ORTHO05D008714 5.0e-13 78.2 80 53.8
FvH4_3g39700 Fragaria vesca HOM05D006986 ORTHO05D008714 8.5e-13 77.4 76 52.6
FAN11G3553 Fragaria x ananassa HOM05D006986 ORTHO05D008714 8.5e-13 77.4 76 52.6
FAN16G0899 Fragaria x ananassa HOM05D006986 ORTHO05D008714 8.5e-13 77.4 76 52.6
Peaxi162Scf00060g00081 Petunia axillaris HOM05D006986 ORTHO05D008714 8.5e-13 77.4 92 47.8
Cc01_g14800 Coffea canephora HOM05D006986 ORTHO05D008714 1.1e-12 77.0 125 40.0
Peaxi162Scf01176g00011 Petunia axillaris HOM05D006986 ORTHO05D008714 1.1e-12 77.0 107 43.9
CsaV3_1G036550 Cucumis sativus L. HOM05D006986 ORTHO05D008714 1.4e-12 76.6 120 41.7
Gohir.D03G142700 Gossypium hirsutum HOM05D006986 ORTHO05D008714 1.4e-12 76.6 96 47.9
Oeu029417.1 Olea europaea HOM05D006986 ORTHO05D008714 1.4e-12 76.6 81 51.9
QL01p026443 Quercus lobata HOM05D006986 ORTHO05D008714 1.4e-12 76.6 129 39.5
Peaxi162Scf00154g00045 Petunia axillaris HOM05D006986 ORTHO05D008714 1.9e-12 76.3 92 46.7
Actinidia23203 Actinidia chinensis HOM05D006986 ORTHO05D008714 2.5e-12 75.9 120 37.5
unitig_60.g25554 Utricularia gibba HOM05D006986 ORTHO05D008714 3.2e-12 75.5 119 39.5
VMungo0540G2396 Vigna mungo HOM05D006986 ORTHO05D008714 3.2e-12 75.5 113 44.2
Potri.009G077700 Populus trichocarpa HOM05D006986 ORTHO05D008714 5.5e-12 74.7 116 42.2
Thhalv10008798m.g Eutrema salsugineum HOM05D006986 ORTHO05D008714 7.2e-12 74.3 106 46.2
Psat5g153400 Pisum sativum HOM05D006986 ORTHO05D008714 7.2e-12 74.3 101 45.5
THA.LOC104800770 Tarenaya hassleriana HOM05D006986 ORTHO05D008714 7.2e-12 74.3 99 46.5
arahy.Tifrunner.gnm1.ann1.58BUY7 Arachis hypogaea HOM05D006986 ORTHO05D008714 1.2e-11 73.6 63 57.1
arahy.Tifrunner.gnm1.ann1.RI1AQ0 Arachis hypogaea HOM05D006986 ORTHO05D008714 1.2e-11 73.6 63 57.1
CDE12G0683 Ceratophyllum demersum HOM05D006986 ORTHO05D008714 1.2e-11 73.6 108 44.4
Nitab4.5_0000758g0110 Nicotiana tabacum HOM05D006986 ORTHO05D008714 1.6e-11 73.2 130 39.2
Nitab4.5_0000003g0230 Nicotiana tabacum HOM05D006986 ORTHO05D008714 2.1e-11 72.8 130 39.2
Peaxi162Scf00108g00061 Petunia axillaris HOM05D006986 ORTHO05D008714 2.1e-11 72.8 92 45.7
CiPaw.13G069900 Carya illinoinensis HOM05D006986 ORTHO05D008714 2.7e-11 72.4 65 53.8
Phvul.006G073400 Phaseolus vulgaris HOM05D006986 ORTHO05D008714 3.6e-11 72.0 113 43.4
AUR62001879 Chenopodium quinoa HOM05D006986 ORTHO05D008714 4.7e-11 71.6 111 40.5
HPP92_003693 Vanilla planifolia HOM05D006986 ORTHO05D008714 4.7e-11 71.6 79 44.3
Cpa.g.sc2.365 Carica papaya HOM05D006986 ORTHO05D008714 7.9e-11 70.9 113 46.0
Migut.N00765 Erythranthe guttata HOM05D006986 ORTHO05D008714 1.0e-10 70.5 122 42.6
PGR102G2392 Punica granatum HOM05D006986 ORTHO05D008714 1.8e-10 69.7 70 51.4
Sabra09G0059300 Salix brachista HOM05D006986 ORTHO05D008714 1.8e-10 69.7 110 39.1
ECA240G2743 Erigeron canadensis HOM05D006986 ORTHO05D008714 2.3e-10 69.3 90 41.1
Rhsim01G0240600 Rhododendron simsii HOM05D006986 ORTHO05D008714 3.0e-10 68.9 74 51.4
Eucgr.B03999 Eucalyptus grandis HOM05D006986 ORTHO05D008714 3.9e-10 68.6 108 38.0
vmacro14620 Vaccinium macrocarpon HOM05D006986 ORTHO05D008714 3.9e-10 68.6 72 51.4
MSTRG.12687 Avicennia marina HOM05D006986 ORTHO05D008714 5.1e-10 68.2 67 50.7
Gohir.A03G025800 Gossypium hirsutum HOM05D006986 ORTHO05D008714 6.7e-10 67.8 98 42.9
Gorai.003G149800 Gossypium raimondii HOM05D006986 ORTHO05D008714 6.7e-10 67.8 98 42.9
Lj6g0005028 Lotus japonicus HOM05D006986 ORTHO05D008714 1.1e-09 67.0 105 38.1
TPR.G35622 Trifolium pratense HOM05D006986 ORTHO05D008714 1.5e-09 66.6 101 41.6
Ca_15003_v3 Cicer arietinum L. HOM05D006986 ORTHO05D008714 2.0e-09 66.2 101 40.6
Sc21g0005260 Simmondsia chinensis HOM05D006986 ORTHO05D008714 2.0e-09 66.2 116 39.7
Carub.0001s0631 Capsella rubella HOM05D006986 ORTHO05D008714 2.6e-09 65.9 101 45.5
Ciclev10029398m.g Citrus clementina HOM05D006986 ORTHO05D008714 2.6e-09 65.9 112 37.5
MD03G1055700 Malus domestica HOM05D006986 ORTHO05D008714 3.3e-09 65.5 73 54.8
Medtr3g031370 Medicago truncatula HOM05D006986 ORTHO05D008714 4.4e-09 65.1 113 39.8
Ah.08g215140 Amaranthus hybridus HOM05D006986 ORTHO05D008714 5.7e-09 64.7 95 41.1
SalBow2G1752 Salvia bowleyana HOM05D006986 ORTHO05D008714 7.4e-09 64.3 62 54.8
AUR62009676 Chenopodium quinoa HOM05D006986 ORTHO05D008714 9.7e-09 63.9 112 37.5
Glyma.11G164400 Glycine max HOM05D006986 ORTHO05D008714 9.7e-09 63.9 114 39.5
SGA_v2.0_scaffold120G32953 Striga asiatica HOM05D006986 ORTHO05D008714 9.7e-09 63.9 65 52.3
Hund29010 Selenicereus undatus HOM05D006986 ORTHO05D008714 1.7e-08 63.2 111 36.9
Hund29014 Selenicereus undatus HOM05D006986 ORTHO05D008714 1.7e-08 63.2 111 36.9
TWI79G1150 Tripterygium wilfordii HOM05D006986 ORTHO05D008714 1.7e-08 63.2 105 41.0
AT1G07020 Arabidopsis thaliana HOM05D006986 ORTHO05D008714 2.2e-08 62.8 94 43.6
Sp1g05740 Schrenkiella parvula HOM05D006986 ORTHO05D008714 3.7e-08 62.0 101 44.6
EL10Ac7g15912 Beta vulgaris HOM05D000133 ORTHO05D000259 4.8e-08 61.6 126 34.9
Peaxi162Scf00055g00052 Petunia axillaris HOM05D006986 ORTHO05D008714 4.8e-08 61.6 107 39.3
AL1G17080 Arabidopsis lyrata HOM05D006986 ORTHO05D008714 6.3e-08 61.2 94 44.7
CANSAT54G0324 Cannabis sativa HOM05D006986 ORTHO05D008714 6.3e-08 61.2 102 40.2
BcaB03g13411 Brassica carinata HOM05D006986 ORTHO05D008714 8.2e-08 60.8 99 41.4
Prupe.6G049000 Prunus persica HOM05D006986 ORTHO05D008714 1.1e-07 60.5 64 53.1
Aa31LG1G8070 Aethionema arabicum HOM05D006986 ORTHO05D008714 2.4e-07 59.3 120 40.0
ATR0174G018 Amborella trichopoda HOM05D006986 ORTHO05D008714 2.4e-07 59.3 95 40.0
BolC8t47074H Brassica oleracea HOM05D006986 ORTHO05D008714 2.4e-07 59.3 106 39.6
A08p35810 Brassica napus HOM05D006986 ORTHO05D008714 3.1e-07 58.9 61 52.5
BraA08t35488Z Brassica rapa HOM05D006986 ORTHO05D008714 3.1e-07 58.9 61 52.5
CARHR006710 Cardamine hirsuta HOM05D006986 ORTHO05D008714 4.1e-07 58.5 96 42.7
FvH4_3g21494 Fragaria vesca HOM05D006986 ORTHO05D008714 4.1e-07 58.5 74 48.6
Glyma.18G057600 Glycine max HOM05D006986 ORTHO05D008714 5.3e-07 58.2 101 37.6
HanXRQChr02g0033811 Helianthus annuus HOM05D006986 ORTHO05D008714 5.3e-07 58.2 108 40.7
Actinidia32614 Actinidia chinensis HOM05D006986 ORTHO05D008714 9.1e-07 57.4 116 33.6
C08p02790 Brassica napus HOM05D006986 ORTHO05D008714 2.0e-06 56.2 108 38.0
SEGI_39902 Sequoiadendron giganteum HOM05D006986 ORTHO05D008714 7.7e-06 54.3 94 38.3


User provided reference genes

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