Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 3.0e-159 565.1 279 100.0
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 1.4e-143 513.1 278 91.7
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 7.2e-76 288.1 282 55.7
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 2.3e-74 283.1 280 54.6
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 8.8e-74 281.2 280 55.4
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 7.4e-73 278.1 279 56.6
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.8e-72 275.4 279 54.5
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 6.9e-71 271.6 277 53.1
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 2.2e-69 266.5 282 51.4
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 8.5e-69 264.6 276 52.9
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 8.5e-69 264.6 248 57.3
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.2e-67 260.8 276 51.1
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 2.1e-67 260.0 234 57.3
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 2.1e-67 260.0 276 52.9
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 2.7e-67 259.6 274 51.1
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 2.7e-67 259.6 277 55.6
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.7e-67 259.6 249 57.0
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 4.7e-67 258.8 276 51.1
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.0e-66 257.7 276 50.7
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.4e-66 257.3 276 53.3
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 1.8e-66 256.9 260 54.2
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 2.3e-66 256.5 281 50.2
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 3.9e-66 255.8 276 51.1
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 3.9e-66 255.8 279 50.5
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 1.5e-65 253.8 252 54.8
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 4.4e-65 252.3 279 50.5
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 9.7e-65 251.1 273 50.2
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 2.8e-64 249.6 241 54.4
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.8e-63 246.9 202 63.4
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 2.4e-63 246.5 277 49.8
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 3.1e-63 246.1 213 59.6
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 7.0e-63 245.0 281 50.5
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 9.1e-63 244.6 248 52.8
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.2e-62 244.2 276 48.9
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.6e-62 243.8 281 50.5
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 2.0e-62 243.4 281 49.8
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 2.6e-62 243.0 248 52.8
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 3.5e-62 242.7 254 53.9
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 5.9e-62 241.9 282 51.1
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 7.7e-62 241.5 278 49.6
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 6.5e-61 238.4 250 50.4
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.1e-60 237.7 252 50.0
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 2.5e-60 236.5 251 52.2
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 2.5e-60 236.5 275 47.6
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 3.2e-60 236.1 284 50.4
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 4.2e-60 235.7 254 51.2
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 5.5e-60 235.3 282 47.9
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 2.1e-59 233.4 277 47.3
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.1e-59 233.4 255 50.6
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 3.6e-59 232.6 278 46.8
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 6.1e-59 231.9 258 50.4
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 6.1e-59 231.9 278 47.5
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.0e-58 231.1 257 50.2
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.0e-58 231.1 278 47.1
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.4e-58 230.7 289 49.1
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 4.0e-58 229.2 278 46.0
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 4.0e-58 229.2 280 45.4
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 6.7e-58 228.4 279 48.0
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 6.7e-58 228.4 287 46.0
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.2e-57 227.6 281 46.6
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 2.6e-57 226.5 278 46.0
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 4.4e-57 225.7 281 46.6
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 4.4e-57 225.7 275 46.5
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 1.3e-56 224.2 280 46.8
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.3e-56 224.2 278 46.0
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.3e-56 224.2 277 49.1
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 2.2e-56 223.4 279 47.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 2.2e-56 223.4 279 47.0
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 6.3e-56 221.9 255 49.4
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 1.4e-55 220.7 278 46.8
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 1.4e-55 220.7 283 45.9
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.8e-55 220.3 277 45.1
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.8e-55 220.3 277 45.1
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 3.1e-55 219.5 249 49.8
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 9.1e-55 218.0 286 47.2
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.2e-54 217.6 218 54.6
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 1.7e-53 213.8 288 45.5
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.7e-53 213.8 209 56.0
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 5.0e-53 212.2 278 46.4
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.2e-51 207.6 241 51.0
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 3.0e-50 203.0 253 47.0
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 2.0e-49 200.3 241 47.7
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-48 197.6 204 52.5
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 4.1e-47 192.6 276 43.1
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.4e-47 192.2 200 54.0
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 7.0e-47 191.8 209 52.6
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 2.9e-45 186.4 193 49.2
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 5.0e-45 185.7 175 56.0
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 6.5e-45 185.3 186 52.2
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.5e-44 184.1 282 39.0
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 3.6e-43 179.5 164 54.3
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 8.0e-43 178.3 259 41.7
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.4e-42 177.6 276 42.0
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 7.0e-39 165.2 187 51.3
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 5.0e-37 159.1 215 43.3
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 6.6e-37 158.7 232 41.8
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 3.3e-36 156.4 213 40.4
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.6e-35 154.1 213 39.4
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 3.0e-34 149.8 241 40.2
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.8e-31 140.6 197 39.6
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.5e-30 136.3 180 46.7
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 6.6e-29 132.1 172 45.9
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 8.6e-29 131.7 178 46.1
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 1.1e-23 114.8 112 53.6
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 3.5e-22 109.8 139 45.3
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.0e-21 108.2 79 67.1
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 8.9e-18 95.1 65 64.6
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 4.9e-16 89.4 144 38.9
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.9e-15 87.4 187 34.2
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.3e-13 81.3 70 60.0
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.0e-13 80.1 64 59.4
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 1.8e-10 70.9 186 26.9
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.4e-09 66.2 58 56.9
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 8.4e-08 62.0 59 52.5
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 8.4e-08 62.0 95 41.1
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.4e-07 61.2 53 56.6


User provided reference genes

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