Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-159 565.5 357 100.0
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-159 565.5 357 100.0
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-159 565.5 357 100.0
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-159 565.5 357 100.0
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 8.4e-138 494.2 353 91.5
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 2.8e-85 319.7 359 68.0
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 2.4e-76 290.0 348 65.2
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 3.6e-64 249.6 291 58.4
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 2.7e-51 206.8 308 50.0
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 2.7e-51 206.8 275 54.5
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-49 200.3 266 56.0
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 3.8e-45 186.4 298 51.7
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-41 173.3 297 47.5
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 2.8e-40 170.2 233 54.9
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-38 164.5 304 40.8
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-37 160.6 208 59.1
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 4.2e-36 156.4 171 48.5
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 9.3e-36 155.2 250 50.8
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 3.0e-34 150.2 302 44.0
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-33 147.9 179 47.5
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.9e-33 147.5 297 35.0
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 3.3e-33 146.7 302 39.4
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-32 144.4 296 40.9
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 4.0e-31 139.8 291 42.6
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 5.8e-30 136.0 164 43.3
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 6.4e-29 132.5 290 39.7
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 2.4e-28 130.6 299 31.4
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 1.2e-27 128.3 304 39.5
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 4.6e-27 126.3 288 42.0
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 4.6e-27 126.3 299 38.5
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 6.0e-27 125.9 291 41.2
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 7.9e-27 125.6 287 41.8
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 1.3e-26 124.8 287 40.4
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 1.3e-26 124.8 287 41.8
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 1.3e-26 124.8 287 40.4
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 1.8e-26 124.4 303 39.9
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.8e-26 124.4 288 42.7
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 1.8e-26 124.4 288 42.7
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-26 124.0 306 38.2
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 3.0e-26 123.6 287 42.2
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-26 123.6 189 49.2
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-26 123.2 323 36.2
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 6.7e-26 122.5 287 40.8
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 6.7e-26 122.5 301 39.2
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 8.7e-26 122.1 288 39.9
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 8.7e-26 122.1 288 39.9
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 2.5e-25 120.6 277 33.6
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 2.5e-25 120.6 289 40.1
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-25 120.2 323 35.6
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 4.3e-25 119.8 286 39.5
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 5.6e-25 119.4 287 41.1
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.8e-24 116.3 291 39.5
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 6.2e-24 115.9 288 29.5
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 8.2e-24 115.5 287 39.4
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 1.1e-23 115.2 315 28.3
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 1.8e-23 114.4 288 38.9
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 4.0e-23 113.2 288 37.8
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 9.0e-23 112.1 298 39.3
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 9.0e-23 112.1 293 38.6
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.0e-22 110.9 315 30.8
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 5.8e-22 109.4 302 37.7
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 7.6e-22 109.0 288 28.8
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 7.6e-22 109.0 262 43.1
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 7.6e-22 109.0 290 38.6
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.0e-21 108.6 286 39.5
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 3.8e-21 106.7 239 42.3
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 4.9e-21 106.3 296 36.1
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 6.5e-21 105.9 283 39.9
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 8.4e-21 105.5 287 37.3
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 1.9e-20 104.4 300 34.3
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 4.2e-20 103.2 302 36.4
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 7.1e-20 102.4 302 36.4
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 1.2e-19 101.7 284 37.7
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 2.1e-19 100.9 287 38.3
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 3.5e-19 100.1 287 37.3
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 6.0e-19 99.4 275 30.5
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.0e-18 98.6 308 28.6
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 2.3e-18 97.4 301 36.9
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-18 97.4 148 52.0
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 3.0e-18 97.1 303 37.0
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 3.0e-18 97.1 286 38.1
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-18 96.7 153 41.2
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 5.1e-18 96.3 236 41.5
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 5.1e-18 96.3 172 53.5
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 6.7e-18 95.9 303 35.6
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 1.9e-17 94.4 287 35.2
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 3.3e-17 93.6 287 33.8
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 3.3e-17 93.6 90 57.8
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 4.3e-17 93.2 287 33.8
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 1.3e-16 91.7 302 36.8
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 3.7e-16 90.1 282 37.6
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 6.3e-16 89.4 298 34.9
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 1.1e-15 88.6 287 36.6
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 2.4e-15 87.4 287 36.6
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 5.3e-15 86.3 152 38.8
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 4.5e-14 83.2 286 27.6
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 6.5e-13 79.3 320 26.6
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.4e-12 78.2 273 38.5
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 2.5e-12 77.4 273 38.8
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 4.6e-11 73.2 95 43.2
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 4.6e-11 73.2 94 42.6
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 4.6e-11 73.2 94 43.6
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 4.6e-11 73.2 105 40.0
PSO017G7049 Papaver somniferum HOM05D005998 ORTHO05D007664 6.1e-11 72.8 90 44.4
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 2.3e-10 70.9 94 41.5
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 3.9e-10 70.1 265 36.6
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 5.1e-10 69.7 248 27.0
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 8.8e-10 68.9 166 47.0
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 1.5e-09 68.2 107 37.4
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 2.2e-08 64.3 90 42.2
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 1.1e-07 62.0 222 38.7
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 1.8e-07 61.2 140 28.6
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 2.4e-07 60.8 294 32.0
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 1.5e-06 58.2 105 36.2
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.5e-06 58.2 284 33.8
ECA240G4644 Erigeron canadensis HOM05D002762 ORTHO05D004643 1.5e-06 58.2 298 22.1
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 3.4e-06 57.0 167 38.3
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 4.5e-06 56.6 163 29.4
Ca_06859_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 5.9e-06 56.2 89 38.2


User provided reference genes

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