Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 4.5e-136 488.0 267 100.0
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 2.6e-123 445.7 258 95.3
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 3.9e-79 298.9 251 66.5
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 7.3e-78 294.7 252 67.9
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.3e-77 293.9 251 66.1
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 3.6e-77 292.4 254 66.1
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.3e-76 288.5 253 66.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.3e-76 288.5 254 65.4
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.5e-75 287.0 257 65.4
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-75 286.6 254 65.0
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.9e-75 284.3 253 64.0
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 1.3e-74 283.9 256 66.4
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.7e-74 283.5 251 63.7
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.7e-74 283.5 251 66.5
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 2.9e-74 282.7 251 65.7
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 8.4e-74 281.2 256 65.6
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.9e-73 280.0 251 64.5
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.2e-73 279.3 251 60.6
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 3.2e-73 279.3 253 65.6
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 4.2e-73 278.9 251 63.7
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 7.1e-73 278.1 279 57.3
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 2.1e-72 276.6 251 64.5
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 2.7e-72 276.2 250 61.2
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.5e-72 275.8 248 64.9
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.3e-71 273.9 251 62.5
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.3e-71 273.9 256 59.0
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 1.3e-71 273.9 261 64.8
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.7e-71 273.5 253 63.6
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 3.9e-71 272.3 253 63.6
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 3.9e-71 272.3 260 59.6
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 3.9e-71 272.3 251 64.1
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 5.1e-71 271.9 250 60.8
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 5.1e-71 271.9 251 63.7
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 5.1e-71 271.9 249 65.5
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 6.6e-71 271.6 250 62.8
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 8.7e-71 271.2 250 62.8
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 8.7e-71 271.2 264 55.3
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.1e-70 270.8 250 64.0
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.5e-70 270.4 250 64.0
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 4.3e-70 268.9 255 62.7
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 4.3e-70 268.9 251 61.8
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 5.6e-70 268.5 252 63.1
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 7.3e-70 268.1 250 61.6
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 9.6e-70 267.7 251 61.8
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.6e-69 266.9 253 62.8
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 8.1e-69 264.6 253 63.6
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 1.1e-68 264.2 246 60.6
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.1e-68 264.2 256 61.7
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 1.8e-68 263.5 251 61.4
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 5.3e-68 261.9 248 62.1
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 6.9e-68 261.5 250 61.6
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 9.9e-67 257.7 251 61.0
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 1.3e-66 257.3 253 60.1
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 1.1e-65 254.2 267 57.7
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.1e-65 254.2 257 62.6
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 4.2e-65 252.3 254 59.1
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.2e-64 250.8 254 59.1
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 1.2e-64 250.8 261 60.2
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.2e-64 250.8 248 57.7
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.2e-64 250.8 253 59.3
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 2.1e-64 250.0 254 59.1
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 3.5e-64 249.2 255 56.5
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 3.5e-64 249.2 277 54.9
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 1.0e-63 247.7 250 60.4
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.3e-63 247.3 253 58.5
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 1.3e-63 247.3 251 58.2
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.8e-63 246.9 253 58.5
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 5.1e-63 245.4 254 57.9
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 8.7e-63 244.6 254 57.5
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 8.7e-63 244.6 254 57.5
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 1.5e-62 243.8 254 58.3
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-62 243.0 251 59.4
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 2.5e-62 243.0 266 57.5
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 5.6e-62 241.9 257 56.8
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 7.4e-62 241.5 251 58.6
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.7e-61 239.2 251 56.2
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 3.1e-60 236.1 251 60.6
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 4.0e-60 235.7 211 63.5
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 5.3e-60 235.3 255 55.7
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.4e-59 232.6 250 55.6
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 4.9e-58 228.8 238 58.8
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 6.5e-58 228.4 241 55.6
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 6.5e-58 228.4 251 55.0
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 7.1e-57 224.9 225 61.3
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 6.0e-56 221.9 188 63.3
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 1.3e-55 220.7 250 55.2
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.5e-54 217.2 191 62.8
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 1.9e-54 216.9 221 60.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 2.5e-54 216.5 185 62.7
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 9.6e-54 214.5 252 54.8
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 1.4e-52 210.7 189 60.8
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-51 207.2 248 54.8
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.6e-51 206.5 205 58.0
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 4.5e-51 205.7 251 53.8
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 7.6e-51 204.9 232 52.2
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 1.7e-50 203.8 256 46.9
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 5.0e-50 202.2 252 47.6
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 5.0e-50 202.2 251 52.2
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.7e-43 178.3 156 64.1
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 7.7e-43 178.3 251 46.6
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.4e-41 174.1 163 61.3
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 2.1e-40 170.2 259 41.3
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 5.7e-38 162.2 263 40.3
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-37 160.2 152 54.6
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.1e-33 147.9 275 40.7
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.3e-31 140.2 162 53.7
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.0e-30 137.1 116 64.7
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 3.3e-30 136.3 253 39.9
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-26 123.6 120 65.8
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-26 123.6 120 65.8
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.9e-25 120.6 165 46.1
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 8.0e-24 115.2 246 38.2
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.3e-22 109.8 211 42.2
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 4.1e-20 102.8 125 48.0
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 1.2e-14 84.7 150 41.3
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 3.1e-12 76.6 198 31.3
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 9.1e-12 75.1 45 71.1
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 2.0e-11 73.9 109 43.1
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 2.2e-10 70.5 126 39.7
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 1.0e-07 61.6 57 54.4


User provided reference genes

Program Settings