Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6510 Papaver somniferum HOM05D006507 ORTHO05D007296 0.0e+00 2460.3 1467 100.0
PSO384G3963 Papaver somniferum HOM05D006507 ORTHO05D007296 0.0e+00 2186.8 1469 90.4
TAR633G2802 Trochodendron aralioides HOM05D006507 ORTHO05D007296 5.6e-87 327.4 1468 28.1
PSO384G2155 Papaver somniferum HOM05D006507 ORTHO05D007296 1.3e-62 246.5 172 82.6
Nn2g12985 Nelumbo nucifera HOM05D006507 ORTHO05D007296 1.0e-35 157.1 551 32.1
CiPaw.13G105600 Carya illinoinensis HOM05D006507 ORTHO05D007296 1.6e-33 149.8 459 32.5
Actinidia24071 Actinidia chinensis HOM05D006507 ORTHO05D007296 3.7e-30 138.7 548 30.5
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 1.1e-29 137.1 1549 23.1
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 2.9e-27 129.0 528 30.1
QL01p036413 Quercus lobata HOM05D006507 ORTHO05D007296 1.1e-26 127.1 234 39.3
CSS0009997 Camellia sinensis var. sinensis HOM05D006507 ORTHO05D007296 1.9e-26 126.3 109 56.9
Thecc.09G262500 Theobroma cacao HOM05D006507 ORTHO05D007296 3.2e-26 125.6 1527 22.9
Dinv32808 Davidia involucrata HOM05D006507 ORTHO05D007296 9.4e-26 124.0 109 56.9
vmacro03159 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 9.4e-26 124.0 126 50.0
Ciclev10027733m.g Citrus clementina HOM05D006507 ORTHO05D007296 1.2e-25 123.6 205 40.5
GSVIVG01025113001 Vitis vinifera HOM05D038408 ORTHO05D007296 6.1e-25 121.3 154 48.7
ECA238G2561 Erigeron canadensis HOM05D006507 ORTHO05D007296 1.4e-24 120.2 109 55.0
SalBow3G2105 Salvia bowleyana HOM05D006507 ORTHO05D007296 2.3e-24 119.4 88 62.5
HanXRQChr06g0183281 Helianthus annuus HOM05D006507 ORTHO05D007296 8.8e-24 117.5 106 55.7
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 1.2e-23 117.1 106 55.7
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 1.2e-23 117.1 179 42.5
Lalb_Chr19g0137501 Lupinus albus HOM05D006507 ORTHO05D007296 1.5e-23 116.7 111 54.1
THA.LOC104810833 Tarenaya hassleriana HOM05D006507 ORTHO05D007296 2.0e-23 116.3 220 36.8
MSTRG.12615 Avicennia marina HOM05D006507 ORTHO05D007296 2.6e-23 115.9 63 81.0
HPP92_026984 Vanilla planifolia HOM05D006507 ORTHO05D007296 2.6e-23 115.9 116 51.7
Migut.N02633 Erythranthe guttata HOM05D006507 ORTHO05D007296 3.3e-23 115.5 92 62.0
PGSC0003DMG400007499 Solanum tuberosum HOM05D006507 ORTHO05D007296 4.4e-23 115.2 99 57.6
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 4.4e-23 115.2 64 76.6
HPP92_015411 Vanilla planifolia HOM05D006507 ORTHO05D007296 4.4e-23 115.2 116 51.7
Actinidia08403 Actinidia chinensis HOM05D006507 ORTHO05D007296 9.7e-23 114.0 69 73.9
CAN.G1001.2 Capsicum annuum HOM05D006507 ORTHO05D007296 9.7e-23 114.0 317 30.9
MD03G1109500 Malus domestica HOM05D006507 ORTHO05D007296 9.7e-23 114.0 113 57.5
Glyma.12G072900 Glycine max HOM05D006507 ORTHO05D007296 1.3e-22 113.6 104 52.9
Prupe.6G092200 Prunus persica HOM05D006507 ORTHO05D007296 1.7e-22 113.2 125 52.0
DCAR_006032 Daucus carota HOM05D006507 ORTHO05D007296 2.2e-22 112.8 350 32.6
Glyma.11G150661 Glycine max HOM05D006507 ORTHO05D007296 3.7e-22 112.1 283 33.6
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 3.7e-22 112.1 1531 22.7
Sc21g0000130 Simmondsia chinensis HOM05D006507 ORTHO05D007296 6.3e-22 111.3 64 78.1
Sopen06g031820 Solanum pennellii HOM05D006507 ORTHO05D007296 6.3e-22 111.3 156 44.2
Cfa011382 Carpinus fangiana HOM05D006507 ORTHO05D007296 1.4e-21 110.2 1512 21.8
Ca_19235_v3 Cicer arietinum L. HOM05D006507 ORTHO05D007296 1.4e-21 110.2 108 55.6
Psat7g223080 Pisum sativum HOM05D006507 ORTHO05D007296 1.4e-21 110.2 251 32.7
Solyc06g075420.1 Solanum lycopersicum HOM05D006507 ORTHO05D007296 1.8e-21 109.8 234 36.8
Cpa.g.sc139.57 Carica papaya HOM05D006507 ORTHO05D007296 2.4e-21 109.4 73 69.9
Thhalv10012478m.g Eutrema salsugineum HOM05D006507 ORTHO05D007296 3.1e-21 109.0 102 56.9
A10p17300 Brassica napus HOM05D006507 ORTHO05D007296 4.1e-21 108.6 69 72.5
C09p52640 Brassica napus HOM05D006507 ORTHO05D007296 4.1e-21 108.6 69 72.5
BolC9t58131H Brassica oleracea HOM05D006507 ORTHO05D007296 4.1e-21 108.6 69 72.5
BraA10t43814Z Brassica rapa HOM05D006507 ORTHO05D007296 4.1e-21 108.6 69 72.5
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 4.1e-21 108.6 1529 22.1
COL.COLO4_25271 Corchorus olitorius HOM05D006507 ORTHO05D007296 4.1e-21 108.6 78 66.7
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 4.1e-21 108.6 534 27.7
Lsat_1_v5_gn_2_25380 Lactuca sativa HOM05D006507 ORTHO05D007296 4.1e-21 108.6 113 47.8
Rhsim13G0091300 Rhododendron simsii HOM05D006507 ORTHO05D007296 5.3e-21 108.2 314 32.5
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 5.3e-21 108.2 68 70.6
AT5G60150 Arabidopsis thaliana HOM05D006507 ORTHO05D007296 7.0e-21 107.8 107 52.3
Sp6g21800 Schrenkiella parvula HOM05D006507 ORTHO05D007296 7.0e-21 107.8 69 72.5
Lj2A1039T65 Lonicera japonica HOM05D006507 ORTHO05D007296 9.1e-21 107.5 405 30.1
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 1.6e-20 106.7 1446 22.3
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 2.0e-20 106.3 1511 22.2
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 3.5e-20 105.5 1500 23.7
Carub.0008s2088 Capsella rubella HOM05D006507 ORTHO05D007296 5.9e-20 104.8 108 52.8
VMungo1127G1622 Vigna mungo HOM05D006507 ORTHO05D007296 1.0e-19 104.0 181 36.5
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 1.3e-19 103.6 69 68.1
CARHR273800 Cardamine hirsuta HOM05D006507 ORTHO05D007296 1.7e-19 103.2 105 49.5
Potri.005G131500 Populus trichocarpa HOM05D006507 ORTHO05D007296 1.7e-19 103.2 1534 22.5
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 2.9e-19 102.4 228 33.8
Atru.chr3.3727 Acer truncatum HOM05D006507 ORTHO05D007296 3.8e-19 102.1 1519 21.9
Atru.chr3.3722 Acer truncatum HOM05D006507 ORTHO05D007296 6.5e-19 101.3 1488 21.7
Sed0026220 Sechium edule HOM05D006507 ORTHO05D007296 2.5e-18 99.4 77 64.9
AUR62006495 Chenopodium quinoa HOM05D006507 ORTHO05D007296 4.2e-18 98.6 71 66.2
AUR62025040 Chenopodium quinoa HOM05D006507 ORTHO05D007296 5.5e-18 98.2 71 66.2
RcHm_v2.0_Chr5g0061361 Rosa chinensis HOM05D006507 ORTHO05D007296 7.2e-18 97.8 442 28.1
FAN16G3496 Fragaria x ananassa HOM05D006507 ORTHO05D007296 9.4e-18 97.4 73 67.1
FAN11G1966 Fragaria x ananassa HOM05D006507 ORTHO05D007296 1.6e-17 96.7 73 65.8
Nitab4.5_0001698g0050 Nicotiana tabacum HOM05D006507 ORTHO05D007296 6.1e-17 94.7 464 28.7
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 1.4e-16 93.6 1535 22.7
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 3.0e-16 92.4 1514 22.1
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 5.2e-16 91.7 1549 22.5
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 2.0e-15 89.7 112 45.5
PSO339G2118 Papaver somniferum HOM05D006507 ORTHO05D007296 2.8e-14 85.9 295 32.2
FvH4_3g33790 Fragaria vesca HOM05D006507 ORTHO05D007296 3.7e-14 85.5 510 26.5
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 3.7e-14 85.5 1553 20.1
EL10Ac9g22402 Beta vulgaris HOM05D006507 ORTHO05D007296 8.3e-14 84.3 157 37.6
CANSAT54G2524 Cannabis sativa HOM05D006507 ORTHO05D007296 3.1e-13 82.4 1521 22.5
vmacro03160 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 4.1e-13 82.0 89 52.8
Pp3c16_7200 Physcomitrium patens HOM05D034648 ORTHO05D007296 5.4e-13 81.6 57 63.2
Hma1.2p1_0840F.1_g226520 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 7.0e-13 81.3 57 66.7
Lalb_Chr19g0137491 Lupinus albus HOM05D006507 ORTHO05D007296 7.0e-13 81.3 198 34.3
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 9.1e-13 80.9 1555 21.9
ATR1159G075 Amborella trichopoda HOM05D006507 ORTHO05D007296 1.6e-12 80.1 497 26.8
Oeu022272.1 Olea europaea HOM05D006507 ORTHO05D007296 1.6e-12 80.1 46 76.1
AagrBONN_evm.TU.Sc2ySwM_368.2680 Anthoceros agrestis HOM05D006507 ORTHO05D007296 2.7e-12 79.3 57 63.2
CDE12G0493 Ceratophyllum demersum HOM05D034970 ORTHO05D007296 2.7e-12 79.3 458 27.5
RcHm_v2.0_Chr5g0061351 Rosa chinensis HOM05D006507 ORTHO05D007296 3.5e-12 79.0 175 38.3
Mapoly0001s0188 Marchantia polymorpha HOM05D006507 ORTHO05D007296 4.5e-12 78.6 64 60.9
CAN.G1001.3 Capsicum annuum HOM05D006507 ORTHO05D007296 5.9e-12 78.2 177 33.9
Hma1.2p1_2156F.1_g315450 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 2.9e-11 75.9 69 59.4
Actinidia07103 Actinidia chinensis HOM05D006507 ORTHO05D007296 3.8e-11 75.5 66 59.1
HanXRQChr06g0183291 Helianthus annuus HOM05D006507 ORTHO05D007296 5.0e-11 75.1 96 44.8
arahy.Tifrunner.gnm1.ann1.NP2AMW Arachis hypogaea HOM05D006507 ORTHO05D007296 8.6e-11 74.3 1494 21.1
CANSAT54G0008 Cannabis sativa HOM05D006507 ORTHO05D007296 1.1e-10 73.9 504 27.6
Nitab4.5_0000270g0010 Nicotiana tabacum HOM05D006507 ORTHO05D007296 1.2e-09 70.5 1494 21.2
Cpa.g.sc139.58 Carica papaya HOM05D006507 ORTHO05D007296 1.6e-09 70.1 166 35.5
Sabra05G0106900 Salix brachista HOM05D006507 ORTHO05D007296 3.6e-09 68.9 1481 22.8
Sopen02g037960 Solanum pennellii HOM05D006507 ORTHO05D007296 1.8e-08 66.6 128 39.8
arahy.Tifrunner.gnm1.ann1.M2HQ4Q Arachis hypogaea HOM05D006507 ORTHO05D007296 2.3e-08 66.2 1471 20.9
CDE04G2211 Ceratophyllum demersum HOM05D034970 ORTHO05D007296 3.0e-08 65.9 451 28.4
CDE04G0439 Ceratophyllum demersum HOM05D000106 ORTHO05D003819 5.2e-08 65.1 463 26.1
Migut.N02632 Erythranthe guttata HOM05D006507 ORTHO05D007296 5.2e-08 65.1 86 50.0
Solyc06g075410.4 Solanum lycopersicum HOM05D006507 ORTHO05D007296 2.0e-07 63.2 69 50.7
Sopen02g037950 Solanum pennellii HOM05D000002 ORTHO05D000001 9.8e-07 60.8 170 30.6
Zm00001eb246740 Zea mays HOM05D006507 ORTHO05D007296 2.2e-06 59.7 195 31.3
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.8e-06 59.3 137 33.6
Hma1.2p1_0660F.1_g197490 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 3.7e-06 58.9 85 42.4
FAN21G2403 Fragaria x ananassa HOM05D006507 ORTHO05D007296 6.3e-06 58.2 570 24.7
Peaxi162Scf00072g00227 Petunia axillaris HOM05D006507 ORTHO05D007296 6.3e-06 58.2 37 78.4


User provided reference genes

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