Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 1.3e-134 483.0 234 100.0
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 7.2e-130 467.2 234 97.0
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 4.5e-71 271.9 192 70.8
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 1.7e-70 270.0 181 74.0
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 2.9e-70 269.2 176 74.4
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 3.8e-70 268.9 192 69.8
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 6.4e-70 268.1 192 70.3
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 2.4e-69 266.2 216 63.4
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 7.1e-69 264.6 185 70.8
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 7.1e-69 264.6 180 73.3
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 9.3e-69 264.2 202 66.8
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 9.3e-69 264.2 201 67.2
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.6e-68 263.5 182 72.0
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 6.0e-68 261.5 176 70.5
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 7.9e-68 261.2 211 63.0
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 6.7e-67 258.1 224 60.7
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.1e-66 257.3 209 62.2
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.5e-66 256.9 190 66.3
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 1.9e-66 256.5 231 60.6
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.9e-66 256.5 180 71.1
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 2.5e-66 256.1 182 71.4
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 2.5e-66 256.1 180 70.6
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.5e-66 256.1 176 72.2
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 3.3e-66 255.8 184 70.1
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 4.3e-66 255.4 172 72.7
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 5.6e-66 255.0 182 68.1
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 7.4e-66 254.6 182 70.9
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 7.4e-66 254.6 182 70.3
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.3e-65 253.8 176 69.3
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.3e-65 253.8 202 59.4
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 1.6e-65 253.4 175 69.7
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.6e-65 253.4 180 68.3
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 3.7e-65 252.3 177 68.4
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 4.8e-65 251.9 188 67.0
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.8e-65 251.9 182 68.7
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 4.8e-65 251.9 185 67.6
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 4.8e-65 251.9 180 69.4
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 8.1e-65 251.1 182 67.6
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.4e-64 250.4 174 71.3
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 2.4e-64 249.6 180 71.1
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 2.4e-64 249.6 180 69.4
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 3.1e-64 249.2 177 68.9
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 9.0e-64 247.7 177 68.4
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.2e-63 247.3 185 66.5
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 1.2e-63 247.3 179 68.2
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 1.5e-63 246.9 221 57.5
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 1.5e-63 246.9 221 57.5
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 2.0e-63 246.5 185 66.5
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 3.4e-63 245.7 206 60.7
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 5.8e-63 245.0 174 69.5
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 5.8e-63 245.0 239 56.5
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.0e-62 244.2 180 68.3
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.0e-62 244.2 180 68.3
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.0e-62 244.2 180 68.3
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.0e-62 244.2 175 67.4
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 1.3e-62 243.8 189 64.6
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 2.2e-62 243.0 171 70.2
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 2.2e-62 243.0 177 65.5
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 2.9e-62 242.7 182 64.3
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 2.9e-62 242.7 185 64.9
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 4.9e-62 241.9 188 61.7
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 4.9e-62 241.9 180 67.8
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 8.4e-62 241.1 183 65.0
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 1.1e-61 240.7 175 68.0
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 1.1e-61 240.7 176 68.2
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 9.3e-61 237.7 178 68.0
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 9.3e-61 237.7 178 68.0
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 1.2e-60 237.3 173 68.2
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 4.6e-60 235.3 170 68.8
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 7.9e-60 234.6 172 67.4
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 1.0e-59 234.2 172 68.0
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.8e-59 233.4 173 66.5
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 2.3e-59 233.0 169 68.0
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.3e-59 233.0 185 61.6
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 3.0e-59 232.6 172 66.9
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 5.1e-59 231.9 172 67.4
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 6.7e-59 231.5 172 66.9
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 5.7e-58 228.4 179 62.6
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 7.4e-58 228.0 196 60.7
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 9.6e-58 227.6 179 64.2
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 4.8e-57 225.3 178 62.9
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 8.2e-57 224.6 201 58.2
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.1e-56 224.2 168 66.7
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.0e-54 217.6 194 60.8
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.7e-54 216.9 188 59.6
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 4.2e-53 212.2 181 61.3
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 2.7e-52 209.5 143 69.2
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.8e-51 206.8 199 56.3
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 3.0e-51 206.1 176 60.8
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 5.1e-51 205.3 177 59.9
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.6e-49 200.3 149 69.1
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 8.2e-49 198.0 152 65.1
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 2.4e-48 196.4 170 63.5
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 1.3e-46 190.7 183 57.9
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 2.9e-46 189.5 190 53.7
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.8e-46 189.1 171 57.9
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.9e-45 186.8 164 60.4
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.2e-44 184.1 171 52.6
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.2e-44 184.1 133 68.4
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 7.9e-44 181.4 169 53.3
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 2.2e-41 173.3 130 70.0
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 6.3e-41 171.8 182 48.9
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 4.5e-39 165.6 189 49.2
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 6.1e-36 155.2 163 55.2
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.0e-34 150.2 185 45.9
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 2.6e-34 149.8 179 46.4
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 2.2e-33 146.7 168 45.2
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 3.2e-29 132.9 104 61.5
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 7.2e-29 131.7 121 57.9
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.6e-28 130.6 90 72.2
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 4.7e-28 129.0 99 62.6
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 8.8e-27 124.8 99 58.6
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 4.4e-26 122.5 128 50.0
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 4.4e-26 122.5 107 60.7
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 5.7e-26 122.1 140 49.3
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.3e-25 120.9 88 67.0
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.1e-24 117.9 145 44.8
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.5e-21 107.5 71 80.3
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.6e-20 104.0 114 48.2
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 2.7e-20 103.2 115 55.7
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 4.1e-16 89.4 63 63.5
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-14 84.0 118 48.3
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 2.9e-14 83.2 121 42.1
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 1.5e-13 80.9 118 46.6
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 2.1e-12 77.0 238 25.2
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 2.3e-11 73.6 54 72.2
PRCOL_00005216 Prasinoderma coloniale HOM05D006215 ORTHO05D007719 9.8e-10 68.2 168 33.3
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 3.7e-09 66.2 58 65.5
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 2.0e-07 60.5 42 59.5


User provided reference genes

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