Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6436 Papaver somniferum HOM05D035235 ORTHO05D003439 0.0e+00 1195.6 621 100.0
PSO384G3329 Papaver somniferum HOM05D035235 ORTHO05D003439 0.0e+00 1101.3 655 89.9
TAR629G3457 Trochodendron aralioides HOM05D003174 ORTHO05D003439 4.0e-18 97.4 574 24.2
PSO541G4065 Papaver somniferum HOM05D035235 ORTHO05D003439 8.3e-16 89.7 343 32.9
PSO541G3184 Papaver somniferum HOM05D003174 ORTHO05D003439 3.2e-15 87.8 205 34.1
TAR623G0639 Trochodendron aralioides HOM05D003174 ORTHO05D003439 5.4e-15 87.0 541 25.3
Ciclev10011079m.g Citrus clementina HOM05D003174 ORTHO05D003439 1.1e-12 79.3 71 56.3
Dinv35623 Davidia involucrata HOM05D003174 ORTHO05D003439 5.6e-12 77.0 106 43.4
Actinidia11253 Actinidia chinensis HOM05D003174 ORTHO05D003439 4.7e-11 73.9 217 30.4
Duzib106G0893 Durio zibethinus HOM05D003174 ORTHO05D003439 8.1e-11 73.2 274 26.3
CAN.G97.37 Capsicum annuum HOM05D003174 ORTHO05D003439 3.1e-10 71.2 191 30.4
Medtr1g069020 Medicago truncatula HOM05D003174 ORTHO05D003439 4.0e-10 70.9 239 26.8
Nn2g10415 Nelumbo nucifera HOM05D003174 ORTHO05D003439 4.0e-10 70.9 165 32.7
CANSAT21G1894 Cannabis sativa HOM05D003174 ORTHO05D003439 5.2e-10 70.5 59 55.9
COL.COLO4_14835 Corchorus olitorius HOM05D003174 ORTHO05D003439 2.0e-09 68.6 150 34.0
Gohir.D09G152900 Gossypium hirsutum HOM05D003174 ORTHO05D003439 3.4e-09 67.8 59 55.9
Gorai.006G174400 Gossypium raimondii HOM05D003174 ORTHO05D003439 3.4e-09 67.8 59 55.9
Prupe.6G252000 Prunus persica HOM05D003174 ORTHO05D003439 3.4e-09 67.8 242 28.9
CSS0007124 Camellia sinensis var. sinensis HOM05D003174 ORTHO05D003439 5.8e-09 67.0 80 48.8
Lj1g0011268 Lotus japonicus HOM05D003174 ORTHO05D003439 5.8e-09 67.0 52 57.7
RcHm_v2.0_Chr3g0467041 Rosa chinensis HOM05D003174 ORTHO05D003439 5.8e-09 67.0 57 59.6
Sopen09g005270 Solanum pennellii HOM05D003174 ORTHO05D003439 5.8e-09 67.0 190 30.5
Lj3A970G57 Lonicera japonica HOM05D003174 ORTHO05D003439 2.9e-08 64.7 71 49.3
CiPaw.10G144200 Carya illinoinensis HOM05D003174 ORTHO05D003439 3.7e-08 64.3 71 50.7
MD04G1124900 Malus domestica HOM05D003174 ORTHO05D003439 6.4e-08 63.5 43 65.1
MSTRG.924 Avicennia marina HOM05D003174 ORTHO05D003439 8.4e-08 63.2 136 36.8
Solyc09g010550.4 Solanum lycopersicum HOM05D003174 ORTHO05D003439 8.4e-08 63.2 190 29.5
FAN09G4813 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.1e-07 62.8 66 50.0
GSVIVG01034205001 Vitis vinifera HOM05D003174 ORTHO05D003439 1.1e-07 62.8 37 75.7
Gohir.A09G157600 Gossypium hirsutum HOM05D003174 ORTHO05D003439 1.4e-07 62.4 50 56.0
BolC2t06049H Brassica oleracea HOM05D003174 ORTHO05D003439 1.9e-07 62.0 81 43.2
Nitab4.5_0000761g0050 Nicotiana tabacum HOM05D003174 ORTHO05D003439 1.9e-07 62.0 137 34.3
C02p00500 Brassica napus HOM05D003174 ORTHO05D003439 3.2e-07 61.2 62 48.4
QL07p047847 Quercus lobata HOM05D003174 ORTHO05D003439 3.2e-07 61.2 65 55.4
TWI53G0288 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 3.2e-07 61.2 120 34.2
AL6G11780 Arabidopsis lyrata HOM05D003174 ORTHO05D003439 4.1e-07 60.8 122 32.8
FAN05G2164 Fragaria x ananassa HOM05D003174 ORTHO05D003439 7.1e-07 60.1 43 65.1
Glyma.13G131100 Glycine max HOM05D003174 ORTHO05D003439 7.1e-07 60.1 134 36.6
Psat0s2930g0080 Pisum sativum HOM05D003174 ORTHO05D003439 7.1e-07 60.1 40 65.0
AT5G02520 Arabidopsis thaliana HOM05D003174 ORTHO05D003439 9.2e-07 59.7 198 25.8
Eucgr.A00550 Eucalyptus grandis HOM05D003174 ORTHO05D003439 9.2e-07 59.7 43 55.8
HanXRQChr08g0226171 Helianthus annuus HOM05D003174 ORTHO05D003439 9.2e-07 59.7 186 28.0
PGSC0003DMG400008848 Solanum tuberosum HOM05D003174 ORTHO05D003439 9.2e-07 59.7 174 31.0
BraA02t04720Z Brassica rapa HOM05D003174 ORTHO05D003439 1.6e-06 58.9 197 27.9
Sed0000072 Sechium edule HOM05D003174 ORTHO05D003439 2.1e-06 58.5 40 62.5
FAN05G5174 Fragaria x ananassa HOM05D003174 ORTHO05D003439 2.7e-06 58.2 58 56.9
Glyma.10G043400 Glycine max HOM05D003174 ORTHO05D003439 2.7e-06 58.2 134 35.1
arahy.Tifrunner.gnm1.ann1.6UZP51 Arachis hypogaea HOM05D003174 ORTHO05D003439 3.5e-06 57.8 37 64.9
Medtr1g069015 Medicago truncatula HOM05D003174 ORTHO05D003439 3.5e-06 57.8 48 58.3
CARHR210840 Cardamine hirsuta HOM05D003174 ORTHO05D003439 6.0e-06 57.0 140 32.9
vmacro20133 Vaccinium macrocarpon HOM05D003174 ORTHO05D003439 6.0e-06 57.0 49 61.2
CDE07G1712 Ceratophyllum demersum HOM05D003174 ORTHO05D003439 7.8e-06 56.6 62 43.5
Sabra04G0051000 Salix brachista HOM05D003174 ORTHO05D003439 7.8e-06 56.6 235 27.2


User provided reference genes

Program Settings