Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 6.2e-138 494.2 262 100.0
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 6.6e-124 447.6 262 91.2
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 3.2e-41 172.9 265 47.5
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.1e-38 164.5 270 44.4
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 3.6e-37 159.5 199 48.2
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 8.9e-36 154.8 268 41.0
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 4.4e-35 152.5 264 40.5
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 4.4e-35 152.5 213 48.8
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 2.2e-34 150.2 267 41.6
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 6.4e-34 148.7 210 48.1
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 6.4e-34 148.7 269 42.0
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 8.3e-34 148.3 268 39.9
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 1.1e-33 147.9 276 40.6
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 3.2e-33 146.4 284 38.4
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 4.1e-33 146.0 269 38.7
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 4.1e-33 146.0 269 41.3
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 4.1e-33 146.0 266 39.1
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 7.1e-33 145.2 274 40.9
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 9.2e-33 144.8 275 41.5
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 9.2e-33 144.8 217 45.2
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 1.2e-32 144.4 280 38.6
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 2.1e-32 143.7 267 39.7
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 3.5e-32 142.9 263 38.0
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 3.5e-32 142.9 265 40.4
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 6.0e-32 142.1 273 41.0
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 6.0e-32 142.1 276 39.5
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 1.0e-31 141.4 273 38.5
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 1.3e-31 141.0 200 46.5
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 1.3e-31 141.0 270 38.5
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 1.3e-31 141.0 267 38.6
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.7e-31 140.6 170 50.0
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 1.7e-31 140.6 267 38.6
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 1.7e-31 140.6 267 38.6
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 1.1e-30 137.9 286 38.5
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 1.5e-30 137.5 224 42.9
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 2.5e-30 136.7 265 40.0
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 7.3e-30 135.2 265 37.7
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 1.6e-29 134.0 264 38.6
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 2.1e-29 133.7 266 39.5
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 3.6e-29 132.9 263 37.6
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 6.2e-29 132.1 267 39.3
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 8.1e-29 131.7 272 38.2
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 1.1e-28 131.3 188 45.2
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 1.1e-28 131.3 162 48.1
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 1.1e-28 131.3 225 40.4
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 1.4e-28 131.0 268 39.2
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 1.8e-28 130.6 263 39.9
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 2.3e-28 130.2 267 38.6
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 3.1e-28 129.8 267 39.0
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 3.1e-28 129.8 272 37.9
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 4.0e-28 129.4 193 43.5
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 4.0e-28 129.4 201 45.3
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 4.0e-28 129.4 304 36.2
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 8.9e-28 128.3 265 36.2
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 1.5e-27 127.5 273 41.4
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 1.5e-27 127.5 285 35.8
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 3.4e-27 126.3 267 38.2
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 4.4e-27 125.9 265 38.5
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 4.4e-27 125.9 284 35.9
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 7.6e-27 125.2 170 47.6
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 7.6e-27 125.2 172 44.2
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 1.7e-26 124.0 286 36.7
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.7e-26 124.0 191 41.9
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 3.2e-25 119.8 262 38.5
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 3.2e-25 119.8 173 48.0
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.1e-25 119.4 221 41.2
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.1e-25 119.4 221 41.2
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.1e-25 119.4 262 38.5
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.1e-25 119.4 262 38.5
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 5.4e-25 119.0 207 43.5
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 7.1e-25 118.6 273 38.5
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 9.2e-25 118.2 197 41.6
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 9.2e-25 118.2 251 38.2
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 3.5e-24 116.3 275 37.8
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 4.6e-24 115.9 159 43.4
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.6e-24 115.9 269 37.9
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 7.8e-24 115.2 272 36.8
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 1.0e-23 114.8 269 37.9
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 1.3e-23 114.4 282 38.7
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 1.3e-23 114.4 218 42.7
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.3e-23 114.4 218 42.7
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.3e-23 114.4 258 37.6
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 1.3e-23 114.4 271 38.4
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 1.7e-23 114.0 180 46.1
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 2.3e-23 113.6 282 38.7
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 2.3e-23 113.6 189 45.5
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 2.3e-23 113.6 269 37.9
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 2.3e-23 113.6 188 43.1
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 2.3e-23 113.6 182 43.4
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 3.0e-23 113.2 189 41.3
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 3.0e-23 113.2 322 32.6
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 3.9e-23 112.8 174 43.1
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 3.9e-23 112.8 227 39.6
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 5.1e-23 112.5 271 39.1
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 5.1e-23 112.5 200 39.5
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 6.6e-23 112.1 203 40.4
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 6.6e-23 112.1 203 40.4
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 6.6e-23 112.1 266 36.1
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 6.6e-23 112.1 274 36.1
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 8.6e-23 111.7 196 41.8
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 8.6e-23 111.7 197 42.6
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 8.6e-23 111.7 181 40.9
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 1.1e-22 111.3 232 37.9
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 1.5e-22 110.9 153 44.4
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 1.5e-22 110.9 153 44.4
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 1.5e-22 110.9 153 44.4
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.9e-22 110.5 216 42.6
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 2.5e-22 110.2 265 38.9
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 2.5e-22 110.2 162 45.7
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 3.3e-22 109.8 188 41.5
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 3.3e-22 109.8 270 35.9
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 4.3e-22 109.4 262 34.4
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 4.3e-22 109.4 270 33.7
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 4.3e-22 109.4 265 38.5
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 5.6e-22 109.0 216 40.7
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 9.6e-22 108.2 187 39.6
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 9.6e-22 108.2 266 37.6
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 9.6e-22 108.2 266 34.2
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 1.6e-21 107.5 154 43.5
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 2.8e-21 106.7 185 41.1
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 3.6e-21 106.3 197 40.6
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 6.2e-21 105.5 266 36.1
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 6.2e-21 105.5 136 47.1
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 8.1e-21 105.1 210 39.5
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.4e-20 104.4 268 37.3
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 1.4e-20 104.4 171 42.7
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 1.8e-20 104.0 189 41.8
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 2.4e-20 103.6 265 33.6
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 2.4e-20 103.6 186 39.8
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 4.0e-20 102.8 172 41.9
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 5.2e-20 102.4 273 35.2
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 5.2e-20 102.4 214 37.9
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 6.8e-20 102.1 262 35.9
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 6.8e-20 102.1 200 40.0
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 6.8e-20 102.1 223 38.1
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 2.0e-19 100.5 271 35.4
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 2.0e-19 100.5 173 41.6
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 2.6e-19 100.1 262 34.4
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.6e-19 100.1 186 39.8
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 2.6e-19 100.1 181 39.8
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 4.4e-19 99.4 188 38.3
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 7.6e-19 98.6 232 34.5
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 9.9e-19 98.2 163 41.7
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 1.3e-18 97.8 184 39.7
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 1.7e-18 97.4 217 37.8
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.2e-18 97.1 213 37.6
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 3.8e-18 96.3 199 40.2
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 4.9e-18 95.9 222 35.1
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 1.4e-17 94.4 230 37.0
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 4.2e-17 92.8 197 37.6
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 5.4e-17 92.4 138 44.2
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 5.4e-17 92.4 192 34.9
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 5.4e-17 92.4 278 33.5
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 2.1e-16 90.5 213 39.4
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.7e-16 90.1 172 40.1
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 2.7e-16 90.1 172 40.1
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 7.8e-16 88.6 204 36.3
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 7.8e-16 88.6 173 37.0
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 1.3e-15 87.8 110 47.3
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 3.9e-15 86.3 213 33.8
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 1.9e-14 84.0 243 32.9
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 2.8e-13 80.1 193 36.3
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 1.8e-12 77.4 169 34.9
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 2.0e-11 73.9 216 31.9
MBI01_g36437_MAGBIO Magnolia biondii HOM05D003503 ORTHO05D003885 1.3e-10 71.2 204 31.4
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 5.4e-09 65.9 71 50.7
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 1.6e-08 64.3 81 44.4
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 6.0e-08 62.4 62 50.0
Actinidia09377 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.0e-07 61.6 93 41.9
Zm00001eb245710 Zea mays HOM05D020767 ORTHO05D003885 1.0e-07 61.6 199 29.6
C07p14610 Brassica napus HOM05D003503 ORTHO05D003885 1.3e-07 61.2 161 32.9
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 1.7e-07 60.8 126 36.5
PGR031G3517 Punica granatum HOM05D003503 ORTHO05D003885 3.9e-07 59.7 370 28.1
Zm00001eb079910 Zea mays HOM05D003503 ORTHO05D003885 3.9e-07 59.7 219 30.6
Os04g0472700 Oryza sativa ssp. japonica HOM05D003503 ORTHO05D003885 1.5e-06 57.8 189 32.3
PGR031G2261 Punica granatum HOM05D003503 ORTHO05D003885 1.5e-06 57.8 90 38.9
CDE05G1889 Ceratophyllum demersum HOM05D003503 ORTHO05D003885 1.9e-06 57.4 192 29.7
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 3.3e-06 56.6 44 61.4
unitig_749.g14030 Utricularia gibba HOM05D003503 ORTHO05D003885 7.3e-06 55.5 259 26.3


User provided reference genes

Program Settings