Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6419 Papaver somniferum HOM05D005131 ORTHO05D006645 4.7e-188 661.0 321 100.0
PSO384G4687 Papaver somniferum HOM05D005131 ORTHO05D006645 2.8e-185 651.7 321 98.1
CiPaw.10G018800 Carya illinoinensis HOM05D005131 ORTHO05D006645 1.4e-163 579.7 318 84.3
CsaV3_3G038080 Cucumis sativus L. HOM05D005131 ORTHO05D006645 4.9e-161 571.2 320 83.4
GSVIVG01022599001 Vitis vinifera HOM05D005131 ORTHO05D006645 3.5e-159 565.1 316 83.2
Aqoxy2G00625 Aquilegia oxysepala HOM05D005131 ORTHO05D006645 6.0e-159 564.3 319 82.1
EL10Ac5g11853 Beta vulgaris HOM05D005131 ORTHO05D006645 6.0e-159 564.3 318 82.4
CSS0022283 Camellia sinensis var. sinensis HOM05D005131 ORTHO05D006645 7.8e-159 563.9 321 82.6
Ciclev10012219m.g Citrus clementina HOM05D005131 ORTHO05D006645 1.0e-158 563.5 318 82.4
Ah.12g059320 Amaranthus hybridus HOM05D005131 ORTHO05D006645 2.3e-158 562.4 318 82.4
Nn2g14347 Nelumbo nucifera HOM05D005131 ORTHO05D006645 2.3e-158 562.4 321 81.9
ClCG10G018240 Citrullus lanatus HOM05D005131 ORTHO05D006645 3.0e-158 562.0 319 82.8
CANSAT64G0057 Cannabis sativa HOM05D005131 ORTHO05D006645 3.9e-158 561.6 318 81.8
vmacro07486 Vaccinium macrocarpon HOM05D005131 ORTHO05D006645 1.5e-157 559.7 321 81.9
Potri.016G068400 Populus trichocarpa HOM05D005131 ORTHO05D006645 1.9e-157 559.3 321 81.0
Actinidia37756 Actinidia chinensis HOM05D005131 ORTHO05D006645 4.3e-157 558.1 313 84.0
Glyma.19G200600 Glycine max HOM05D005131 ORTHO05D006645 4.3e-157 558.1 315 83.2
MSTRG.5889 Avicennia marina HOM05D005131 ORTHO05D006645 9.5e-157 557.0 316 82.6
Sopen06g002230 Solanum pennellii HOM05D005131 ORTHO05D006645 9.5e-157 557.0 320 82.2
VMungo1383G1979 Vigna mungo HOM05D005131 ORTHO05D006645 1.2e-156 556.6 316 82.0
Manes.09G044500 Manihot esculenta HOM05D005131 ORTHO05D006645 1.6e-156 556.2 318 81.8
Migut.J00690 Erythranthe guttata HOM05D005131 ORTHO05D006645 2.8e-156 555.4 311 83.3
Prupe.7G093300 Prunus persica HOM05D005131 ORTHO05D006645 2.8e-156 555.4 316 81.6
BcaC02g09261 Brassica carinata HOM05D005131 ORTHO05D006645 3.6e-156 555.1 318 82.4
Eucgr.A02573 Eucalyptus grandis HOM05D005131 ORTHO05D006645 3.6e-156 555.1 316 81.0
AT3G52390 Arabidopsis thaliana HOM05D005131 ORTHO05D006645 4.7e-156 554.7 318 81.4
HanXRQChr13g0398521 Helianthus annuus HOM05D005131 ORTHO05D006645 4.7e-156 554.7 317 80.4
Manes.08G034500 Manihot esculenta HOM05D005131 ORTHO05D006645 4.7e-156 554.7 318 79.9
Solyc06g007310.4 Solanum lycopersicum HOM05D005131 ORTHO05D006645 8.1e-156 553.9 313 83.1
Sp5g09900 Schrenkiella parvula HOM05D005131 ORTHO05D006645 1.4e-155 553.1 318 82.1
FAN05G1272 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.8e-155 552.7 316 81.0
Gohir.D09G129600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 2.3e-155 552.4 321 80.4
Sc22g0002890 Simmondsia chinensis HOM05D005131 ORTHO05D006645 3.1e-155 552.0 314 82.2
AL5G33050 Arabidopsis lyrata HOM05D005131 ORTHO05D006645 4.0e-155 551.6 318 80.5
TPR.G31287 Trifolium pratense HOM05D005131 ORTHO05D006645 5.2e-155 551.2 316 81.3
AUR62030719 Chenopodium quinoa HOM05D005131 ORTHO05D006645 8.9e-155 550.4 314 83.1
FAN05G3424 Fragaria x ananassa HOM05D005131 ORTHO05D006645 8.9e-155 550.4 316 80.7
MD12G1041900 Malus domestica HOM05D005131 ORTHO05D006645 8.9e-155 550.4 316 80.7
Phvul.001G196500 Phaseolus vulgaris HOM05D005131 ORTHO05D006645 8.9e-155 550.4 315 81.6
FvH4_6g20480 Fragaria vesca HOM05D005131 ORTHO05D006645 1.2e-154 550.1 316 80.1
TWI74G0987 Tripterygium wilfordii HOM05D005131 ORTHO05D006645 1.2e-154 550.1 318 80.2
CARHR162160 Cardamine hirsuta HOM05D005131 ORTHO05D006645 2.6e-154 548.9 321 80.1
QL07p027488 Quercus lobata HOM05D005131 ORTHO05D006645 2.6e-154 548.9 305 83.0
BcaB02g08573 Brassica carinata HOM05D005131 ORTHO05D006645 5.8e-154 547.7 311 83.0
RcHm_v2.0_Chr3g0476361 Rosa chinensis HOM05D005131 ORTHO05D006645 7.5e-154 547.4 316 80.1
Hund10854 Selenicereus undatus HOM05D005131 ORTHO05D006645 7.5e-154 547.4 318 79.9
Lj1g0022682 Lotus japonicus HOM05D005131 ORTHO05D006645 1.3e-153 546.6 314 80.9
Medtr7g106430 Medicago truncatula HOM05D005131 ORTHO05D006645 1.7e-153 546.2 316 80.4
Atru.chr8.1330 Acer truncatum HOM05D005131 ORTHO05D006645 2.9e-153 545.4 305 83.0
Cc06_g06690 Coffea canephora HOM05D005131 ORTHO05D006645 4.9e-153 544.7 309 80.9
Aa31LG10G7440 Aethionema arabicum HOM05D005131 ORTHO05D006645 1.1e-152 543.5 324 79.0
THA.LOC104803758 Tarenaya hassleriana HOM05D005131 ORTHO05D006645 1.4e-152 543.1 315 80.6
Gorai.006G148500 Gossypium raimondii HOM05D005131 ORTHO05D006645 1.9e-152 542.7 314 80.6
Ca_09063_v3 Cicer arietinum L. HOM05D005131 ORTHO05D006645 1.2e-151 540.0 316 80.1
PGR004G1515 Punica granatum HOM05D005131 ORTHO05D006645 4.6e-151 538.1 317 78.9
Os07g0158200 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 1.7e-150 536.2 317 77.9
Sed0026420 Sechium edule HOM05D005131 ORTHO05D006645 1.7e-150 536.2 301 83.1
Thecc.05G106400 Theobroma cacao HOM05D005131 ORTHO05D006645 1.7e-150 536.2 321 79.8
Haze_20155 Corylus avellana HOM05D005131 ORTHO05D006645 1.1e-149 533.5 297 84.2
Lsat_1_v5_gn_6_33480 Lactuca sativa HOM05D005131 ORTHO05D006645 2.5e-149 532.3 324 76.9
Lalb_Chr20g0111311 Lupinus albus HOM05D005131 ORTHO05D006645 5.6e-149 531.2 299 82.6
Cpa.g.sc104.11 Carica papaya HOM05D005131 ORTHO05D006645 7.3e-149 530.8 304 81.6
Carub.0005s1875 Capsella rubella HOM05D005131 ORTHO05D006645 2.8e-148 528.9 305 81.0
BraA04t16401Z Brassica rapa HOM05D005131 ORTHO05D006645 4.7e-148 528.1 313 80.2
C04p40630 Brassica napus HOM05D005131 ORTHO05D006645 1.4e-147 526.6 313 80.2
BolC4t25644H Brassica oleracea HOM05D005131 ORTHO05D006645 1.4e-147 526.6 313 80.2
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 2.4e-147 525.8 313 77.6
Duzib128G0735 Durio zibethinus HOM05D005131 ORTHO05D006645 4.0e-147 525.0 321 77.6
PGSC0003DMG401020557 Solanum tuberosum HOM05D005131 ORTHO05D006645 6.8e-147 524.2 304 81.2
A04p07040 Brassica napus HOM05D005131 ORTHO05D006645 8.9e-147 523.9 312 79.8
Thhalv10010578m.g Eutrema salsugineum HOM05D005131 ORTHO05D006645 1.5e-146 523.1 302 80.8
DCAR_009180 Daucus carota HOM05D005131 ORTHO05D006645 4.4e-146 521.5 301 78.7
COL.COLO4_29542 Corchorus olitorius HOM05D005131 ORTHO05D006645 1.1e-144 516.9 371 67.7
Gohir.A09G133400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.4e-144 516.5 305 78.7
TAR636G0548 Trochodendron aralioides HOM05D005131 ORTHO05D006645 3.2e-144 515.4 313 78.6
Nitab4.5_0012238g0010 Nicotiana tabacum HOM05D005131 ORTHO05D006645 4.2e-144 515.0 323 77.1
Rhsim03G0063800 Rhododendron simsii HOM05D005131 ORTHO05D006645 5.4e-144 514.6 321 78.2
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 6.0e-143 511.1 291 81.8
Haze_20150 Corylus avellana HOM05D005131 ORTHO05D006645 1.3e-142 510.0 302 80.1
Zm00001eb117460 Zea mays HOM05D005131 ORTHO05D006645 8.7e-142 507.3 306 75.8
Hund14967 Selenicereus undatus HOM05D005131 ORTHO05D006645 2.5e-141 505.8 299 79.3
arahy.Tifrunner.gnm1.ann1.X3LXDK Arachis hypogaea HOM05D005131 ORTHO05D006645 4.9e-137 491.5 307 76.5
SEGI_21507 Sequoiadendron giganteum HOM05D005131 ORTHO05D006645 4.9e-137 491.5 318 70.4
ATR0697G267 Amborella trichopoda HOM05D005131 ORTHO05D006645 1.4e-136 490.0 294 75.9
FAN14G5766 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.9e-136 489.6 318 73.0
SHI18412 Sapria himalayana HOM05D005131 ORTHO05D006645 1.9e-133 479.6 313 70.9
Peaxi162Scf00012g02523 Petunia axillaris HOM05D005131 ORTHO05D006645 1.6e-132 476.5 318 73.6
CAN.G869.8 Capsicum annuum HOM05D005131 ORTHO05D006645 8.1e-132 474.2 266 83.5
FAN02G0570 Fragaria x ananassa HOM05D005131 ORTHO05D006645 6.9e-131 471.1 270 80.7
Gohir.A13G054600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 4.5e-130 468.4 305 72.5
Gohir.A09G012800 Gossypium hirsutum HOM05D005131 ORTHO05D006645 2.2e-129 466.1 305 72.1
Gohir.A05G372400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 1.4e-128 463.4 305 72.5
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 7.1e-128 461.1 316 66.1
Dinv12349 Davidia involucrata HOM05D005131 ORTHO05D006645 2.1e-127 459.5 253 83.8
arahy.Tifrunner.gnm1.ann1.275XDC Arachis hypogaea HOM05D005131 ORTHO05D006645 2.5e-125 452.6 284 76.8
Hma1.2p1_0079F.1_g041720 Hydrangea macrophylla HOM05D005131 ORTHO05D006645 4.8e-124 448.4 305 71.8
AagrBONN_evm.TU.Sc2ySwM_117.2339 Anthoceros agrestis HOM05D005131 ORTHO05D006645 8.1e-124 447.6 298 68.1
Oeu035639.1 Olea europaea HOM05D005131 ORTHO05D006645 3.1e-123 445.7 254 81.1
Nitab4.5_0000121g0080 Nicotiana tabacum HOM05D005131 ORTHO05D006645 3.1e-115 419.1 298 71.5
CAN.G741.26 Capsicum annuum HOM05D005131 ORTHO05D006645 1.2e-114 417.2 274 73.7
unitig_26.g9145 Utricularia gibba HOM05D005131 ORTHO05D006645 4.5e-114 415.2 258 77.9
SMO334G0001 Selaginella moellendorffii HOM05D005131 ORTHO05D006645 1.1e-112 410.6 287 65.5
AUR62036353 Chenopodium quinoa HOM05D005131 ORTHO05D006645 1.0e-110 404.1 234 82.1
Pp3c11_16390 Physcomitrium patens HOM05D005131 ORTHO05D006645 8.2e-108 394.4 316 58.9
MSTRG.18896 Avicennia marina HOM05D005131 ORTHO05D006645 1.4e-107 393.7 218 84.9
CBR_g41666 Chara braunii HOM05D005131 ORTHO05D006645 5.7e-101 371.7 317 56.2
MBI12_g38626_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 2.9e-97 359.4 213 78.9
Cre02.g085650 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D006645 2.4e-91 339.7 306 54.9
MCO14G398 Micromonas commoda HOM05D005131 ORTHO05D006645 1.4e-88 330.5 326 52.5
HPP92_012180 Vanilla planifolia HOM05D005131 ORTHO05D006645 4.2e-80 302.4 210 65.7
PRCOL_00003277 Prasinoderma coloniale HOM05D005131 ORTHO05D006645 1.3e-76 290.8 288 49.0
MELO3C009548.2 Cucumis melo HOM05D000492 ORTHO05D000499 2.2e-76 290.0 170 81.2
Haze_27322 Corylus avellana HOM05D005131 ORTHO05D006645 2.0e-74 283.5 299 49.8
HPP92_013927 Vanilla planifolia HOM05D005131 ORTHO05D006645 2.0e-74 283.5 180 71.1
MELO3C031004.2 Cucumis melo HOM05D005131 ORTHO05D006645 1.4e-67 260.8 144 83.3
CDE09G0133 Ceratophyllum demersum HOM05D005131 ORTHO05D006645 7.0e-67 258.5 170 72.4
HPP92_026830 Vanilla planifolia HOM05D005131 ORTHO05D006645 7.0e-67 258.5 165 70.9
Zm00001eb419840 Zea mays HOM05D005131 ORTHO05D006645 4.4e-61 239.2 191 60.7
HPP92_013928 Vanilla planifolia HOM05D005131 ORTHO05D006645 1.3e-60 237.7 142 79.6
Lj7A140G6 Lonicera japonica HOM05D005131 ORTHO05D006645 5.4e-59 232.3 182 65.4
Sabra16G0069400 Salix brachista HOM05D005131 ORTHO05D006645 1.7e-52 210.7 119 79.8
Zm00001eb002330 Zea mays HOM05D005131 ORTHO05D006645 4.1e-51 206.1 134 70.1
Psat3g205680 Pisum sativum HOM05D005131 ORTHO05D006645 2.7e-50 203.4 116 79.3
Cc04_g12370 Coffea canephora HOM05D005131 ORTHO05D006645 6.8e-46 188.7 108 79.6
MBI12_g38628_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 3.4e-45 186.4 104 82.7
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 1.3e-44 184.5 130 70.0
Zm00001eb083350 Zea mays HOM05D005131 ORTHO05D006645 1.1e-40 171.4 118 66.9
arahy.Tifrunner.gnm1.ann1.Y0MH84 Arachis hypogaea HOM05D005131 ORTHO05D006645 6.8e-38 162.2 167 53.3
Zm00001eb324820 Zea mays HOM05D005131 ORTHO05D006645 8.9e-38 161.8 105 69.5
Os08g0165800 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 9.2e-35 151.8 324 33.6
HPP92_012178 Vanilla planifolia HOM05D005131 ORTHO05D006645 5.6e-32 142.5 106 65.1
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 1.2e-31 141.4 324 34.0
Psat0s6170g0080 Pisum sativum HOM05D005131 ORTHO05D006645 1.1e-30 138.3 95 74.7
Os07g0157900 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 2.3e-25 120.6 119 53.8
Psat3g205720 Pisum sativum HOM05D005131 ORTHO05D006645 3.9e-25 119.8 71 77.5
Zm00001eb429030 Zea mays HOM05D005131 ORTHO05D006645 1.5e-21 107.8 69 71.0
Zm00001eb324830 Zea mays HOM05D005131 ORTHO05D006645 4.4e-21 106.3 69 71.0
MD14G1041100 Malus domestica HOM05D005131 ORTHO05D006645 7.6e-21 105.5 301 28.6
Pp3c7_11890 Physcomitrium patens HOM05D005131 ORTHO05D006645 2.7e-18 97.1 95 50.5
Zm00001eb392810 Zea mays HOM05D005131 ORTHO05D006645 4.8e-15 86.3 55 70.9
MCO10G056 Micromonas commoda HOM05D005131 ORTHO05D006645 6.9e-14 82.4 163 31.9
A01p30550 Brassica napus HOM05D005131 ORTHO05D033215 1.3e-12 78.2 42 85.7
BraA01t03187Z Brassica rapa HOM05D005131 ORTHO05D033215 1.3e-12 78.2 42 85.7
SGA_v2.0_scaffold114G31969 Striga asiatica HOM05D004773 ORTHO05D005943 1.1e-11 75.1 284 26.4
AUR62016916 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.4e-11 74.7 303 25.7
BolC1t02473H Brassica oleracea HOM05D005131 ORTHO05D033215 1.9e-11 74.3 40 85.0
TAR633G0521 Trochodendron aralioides HOM05D005131 ORTHO05D006645 9.3e-11 72.0 49 63.3
Zm00001eb073330 Zea mays HOM05D004773 ORTHO05D005943 9.3e-11 72.0 294 24.8
Duzib177G1208 Durio zibethinus HOM05D004773 ORTHO05D005943 1.6e-10 71.2 313 25.9
SalBow8G5056 Salvia bowleyana HOM05D004773 ORTHO05D005943 2.1e-10 70.9 287 24.7
Cpa.g.sc73.89 Carica papaya HOM05D004773 ORTHO05D005943 2.7e-10 70.5 306 25.8
MSTRG.7300 Avicennia marina HOM05D004773 ORTHO05D005943 6.0e-10 69.3 269 26.4
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 6.0e-10 69.3 289 24.9
Thecc.05G229300 Theobroma cacao HOM05D004773 ORTHO05D005943 6.0e-10 69.3 307 24.8
AUR62014736 Chenopodium quinoa HOM05D004773 ORTHO05D005943 1.0e-09 68.6 303 25.1
Thecc.05G229900 Theobroma cacao HOM05D004773 ORTHO05D005943 1.0e-09 68.6 314 24.8
FAN14G1019 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.8e-09 67.8 291 25.8
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.3e-09 67.4 291 25.4
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.3e-09 67.4 289 25.3
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.3e-09 67.4 291 25.4
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 3.0e-09 67.0 291 25.8
Oeu053928.1 Olea europaea HOM05D004773 ORTHO05D005943 5.1e-09 66.2 307 23.1
Migut.M01200 Erythranthe guttata HOM05D004773 ORTHO05D005943 6.7e-09 65.9 292 25.0
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 6.7e-09 65.9 289 25.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 6.7e-09 65.9 289 25.3
DCAR_024890 Daucus carota HOM05D004773 ORTHO05D005943 8.7e-09 65.5 310 23.5
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 5.6e-08 62.8 207 27.5
TAR317G0002 Trochodendron aralioides HOM05D004773 ORTHO05D005943 5.6e-08 62.8 206 25.7
THA.LOC104802900 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 9.6e-08 62.0 289 26.3
Eucgr.F01970 Eucalyptus grandis HOM05D004773 ORTHO05D005943 1.3e-07 61.6 286 24.5
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.3e-07 61.6 207 27.5
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 1.3e-07 61.6 121 32.2
FAN09G2979 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.1e-07 60.8 207 27.5
Sabra13G0063900 Salix brachista HOM05D004773 ORTHO05D008759 3.7e-07 60.1 301 24.9
CAN.G1767.1 Capsicum annuum HOM05D000162 ORTHO05D000090 4.8e-07 59.7 79 44.3
FvH4_2g19461 Fragaria vesca HOM05D005131 ORTHO05D006645 8.1e-07 58.9 51 49.0
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 1.8e-06 57.8 213 26.3
THA.LOC104802901 Tarenaya hassleriana HOM05D004773 ORTHO05D005943 1.8e-06 57.8 204 26.0
ECA234G0571 Erigeron canadensis HOM05D000140 ORTHO05D000087 2.4e-06 57.4 285 23.5
FAN02G4326 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.1e-06 57.0 132 31.8


User provided reference genes

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