Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 1.1e-204 716.5 361 100.0
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 9.7e-158 560.5 361 74.2
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 1.4e-156 556.6 361 74.8
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 2.0e-155 552.7 361 73.1
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 8.8e-151 537.3 361 74.2
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 8.8e-151 537.3 361 74.2
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 2.0e-150 536.2 356 73.6
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 5.7e-150 534.6 361 73.1
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 9.7e-150 533.9 361 72.6
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 2.8e-149 532.3 361 71.5
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 2.8e-149 532.3 360 71.4
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 3.7e-149 531.9 361 72.3
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 1.4e-148 530.0 361 71.5
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 2.4e-148 529.3 360 72.5
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 4.1e-148 528.5 361 71.2
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 7.0e-148 527.7 359 72.1
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 9.1e-148 527.3 361 70.4
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 7.7e-147 524.2 357 72.8
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 1.0e-146 523.9 361 70.4
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 2.9e-146 522.3 361 71.7
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 2.9e-146 522.3 361 70.4
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 2.9e-146 522.3 361 71.5
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 2.5e-145 519.2 359 69.6
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 2.5e-145 519.2 361 70.1
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 3.2e-145 518.8 357 71.1
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 3.2e-145 518.8 361 68.1
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 4.2e-145 518.5 362 70.4
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 5.5e-145 518.1 357 70.9
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 7.2e-145 517.7 356 71.1
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 9.4e-145 517.3 361 67.9
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 1.2e-144 516.9 357 70.3
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 2.1e-144 516.2 362 71.0
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 2.7e-144 515.8 359 69.6
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 4.7e-144 515.0 363 71.1
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 1.8e-143 513.1 359 69.9
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 3.0e-143 512.3 355 71.5
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 2.6e-142 509.2 361 70.1
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 1.7e-141 506.5 357 71.4
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 2.2e-141 506.1 358 70.1
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 2.8e-141 505.8 359 71.0
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 6.3e-141 504.6 359 69.4
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 1.4e-140 503.4 357 68.9
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 2.4e-140 502.7 359 69.4
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 5.3e-140 501.5 360 70.0
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 7.0e-140 501.1 364 68.4
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 1.2e-139 500.4 357 70.3
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 1.6e-139 500.0 361 69.0
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 2.7e-139 499.2 357 68.3
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 2.7e-139 499.2 388 64.2
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 5.9e-139 498.0 357 70.0
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 7.7e-139 497.7 357 69.7
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 2.2e-138 496.1 362 68.2
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 2.9e-138 495.7 357 70.3
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 1.9e-137 493.0 360 66.7
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 3.2e-137 492.3 357 69.2
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 7.2e-137 491.1 357 66.9
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 9.4e-137 490.7 361 67.3
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 9.4e-137 490.7 357 69.5
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 9.4e-137 490.7 357 69.5
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 1.6e-136 490.0 358 68.7
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 6.1e-136 488.0 357 68.3
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 1.2e-134 483.8 318 73.0
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 2.0e-134 483.0 357 68.6
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 4.4e-134 481.9 357 68.6
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 7.5e-134 481.1 357 68.3
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 2.2e-133 479.6 360 67.8
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 2.2e-133 479.6 357 67.2
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 2.2e-133 479.6 360 64.7
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 4.8e-133 478.4 357 68.1
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 3.1e-132 475.7 357 68.1
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 9.1e-132 474.2 361 65.1
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 1.2e-131 473.8 361 65.1
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 1.6e-131 473.4 391 60.4
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 3.5e-131 472.2 357 64.1
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 1.3e-130 470.3 357 65.8
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 7.2e-129 464.5 358 62.6
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 1.4e-127 460.3 357 65.5
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 5.2e-127 458.4 364 64.3
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 4.4e-126 455.3 362 63.8
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 2.8e-125 452.6 361 64.8
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 7.0e-124 448.0 356 65.7
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 2.9e-122 442.6 376 61.2
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 5.6e-121 438.3 380 60.0
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 5.2e-119 431.8 353 63.5
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 4.4e-118 428.7 358 60.9
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 4.9e-117 425.2 474 50.4
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 6.6e-114 414.8 357 58.0
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 1.5e-113 413.7 357 58.5
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 5.6e-113 411.8 357 57.1
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.0e-106 391.0 253 75.5
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 4.7e-104 382.1 258 72.1
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 3.7e-101 372.5 360 54.7
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 7.1e-100 368.2 351 51.6
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 4.6e-99 365.5 252 71.8
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 1.7e-98 363.6 258 69.4
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 1.7e-93 347.1 357 47.9
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 1.2e-91 340.9 375 47.2
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 7.8e-91 338.2 359 47.9
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 7.3e-89 331.6 344 48.5
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 1.2e-86 324.3 365 46.8
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 2.6e-86 323.2 360 49.7
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 5.4e-84 315.5 294 56.8
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 7.3e-81 305.1 344 46.5
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 3.6e-80 302.8 205 69.8
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 8.4e-77 291.6 201 70.1
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 8.7e-74 281.6 347 40.9
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 4.8e-72 275.8 354 41.8
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 9.9e-70 268.1 357 40.1
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 1.1e-49 201.4 149 66.4
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.5e-46 191.0 150 64.7
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 6.7e-42 175.6 188 52.7
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 1.0e-37 161.8 401 31.7
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 1.3e-37 161.4 220 43.6
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 1.6e-35 154.5 104 68.3
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 1.6e-30 137.9 153 53.6
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 1.0e-29 135.2 98 64.3
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 2.9e-29 133.7 357 27.5
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 6.5e-29 132.5 128 53.9
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 3.2e-28 130.2 135 54.1
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 8.0e-27 125.6 84 66.7
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 1.5e-25 121.3 93 63.4
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 1.8e-23 114.4 79 69.6
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 1.7e-21 107.8 96 58.3
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.9e-20 104.4 88 60.2
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 3.2e-20 103.6 88 60.2
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 2.3e-18 97.4 133 46.6
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 3.0e-18 97.1 99 56.6
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 3.0e-18 97.1 99 56.6
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 2.8e-16 90.5 97 51.5
Oeu037561.1 Olea europaea HOM05D006024 ORTHO05D007505 2.9e-13 80.5 51 72.5
BcaC09g49021 Brassica carinata HOM05D006024 ORTHO05D007505 1.2e-09 68.6 78 53.8


User provided reference genes

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