Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 1.6e-197 692.6 348 100.0
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 2.8e-194 681.8 353 98.0
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 2.5e-147 525.8 347 77.2
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 2.2e-143 512.7 349 73.6
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 6.5e-143 511.1 344 74.4
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 7.9e-141 504.2 317 77.6
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 5.1e-140 501.5 321 76.3
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 8.8e-140 500.7 320 75.3
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 1.1e-139 500.4 362 70.4
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 4.4e-139 498.4 344 71.8
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 7.4e-139 497.7 327 76.1
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 3.7e-138 495.4 342 72.8
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 2.4e-137 492.7 357 70.6
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 2.4e-137 492.7 352 70.2
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 2.4e-137 492.7 347 71.2
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 2.0e-136 489.6 348 71.0
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 2.0e-136 489.6 340 71.5
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 2.6e-136 489.2 327 74.6
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 2.6e-136 489.2 334 71.6
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 4.5e-136 488.4 340 71.5
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 7.7e-136 487.6 343 70.6
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 7.7e-136 487.6 343 70.6
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 1.0e-135 487.3 328 73.5
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 2.2e-135 486.1 343 69.7
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 2.2e-135 486.1 343 70.3
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 2.2e-135 486.1 344 70.6
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 2.9e-135 485.7 316 76.6
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 3.8e-135 485.3 357 69.2
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 5.0e-135 485.0 353 69.7
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 5.0e-135 485.0 320 72.2
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 5.0e-135 485.0 329 73.6
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 5.0e-135 485.0 348 69.8
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 6.5e-135 484.6 328 72.0
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 6.5e-135 484.6 344 71.8
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.5e-134 483.4 333 73.0
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 1.9e-134 483.0 319 74.3
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 3.2e-134 482.3 338 71.0
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 3.2e-134 482.3 328 72.0
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 5.5e-134 481.5 327 72.5
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 7.2e-134 481.1 338 70.7
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 7.2e-134 481.1 356 68.8
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.2e-133 480.3 367 67.0
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 3.6e-133 478.8 346 72.0
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 4.7e-133 478.4 336 70.5
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 4.7e-133 478.4 343 69.4
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 8.0e-133 477.6 359 69.1
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 8.0e-133 477.6 348 69.3
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.0e-132 477.2 345 68.4
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 1.0e-132 477.2 331 71.9
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 1.0e-132 477.2 367 67.8
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 2.3e-132 476.1 340 68.5
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 2.3e-132 476.1 311 74.3
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 3.0e-132 475.7 335 70.7
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 4.0e-132 475.3 346 69.7
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 1.1e-131 473.8 351 68.7
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 1.1e-131 473.8 333 70.0
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 1.5e-131 473.4 320 71.6
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.5e-131 473.4 358 68.7
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 2.0e-131 473.0 320 73.4
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 4.4e-131 471.9 316 74.1
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 3.7e-130 468.8 319 73.0
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 3.7e-130 468.8 359 66.3
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 8.2e-130 467.6 340 67.6
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 8.2e-130 467.6 354 67.5
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 8.2e-130 467.6 327 70.6
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 1.1e-129 467.2 342 67.5
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.1e-129 467.2 365 66.0
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.4e-129 466.8 357 68.1
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 1.8e-129 466.5 317 72.6
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 4.1e-129 465.3 351 66.4
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 5.3e-129 464.9 360 66.9
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 2.0e-128 463.0 355 67.0
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 2.7e-128 462.6 353 68.8
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 5.9e-128 461.5 357 67.2
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 3.8e-127 458.8 316 72.5
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 1.5e-126 456.8 325 70.2
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 1.9e-126 456.4 349 66.5
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 1.9e-126 456.4 328 68.3
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 3.2e-126 455.7 326 70.2
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 1.2e-125 453.8 322 69.9
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 2.7e-125 452.6 328 68.3
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 6.1e-125 451.4 350 67.4
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 6.1e-125 451.4 284 76.1
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 4.0e-124 448.7 358 66.2
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 4.0e-124 448.7 331 67.1
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 5.2e-124 448.4 337 66.8
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 6.8e-124 448.0 343 66.8
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 1.2e-123 447.2 346 66.8
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 1.5e-123 446.8 346 67.1
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 7.5e-123 444.5 359 64.9
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 9.8e-123 444.1 314 68.8
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.3e-122 443.7 310 70.6
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 2.2e-122 443.0 336 66.4
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.8e-121 439.9 341 65.7
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 1.6e-120 436.8 344 64.8
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 4.5e-120 435.3 314 69.4
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 5.9e-120 434.9 440 54.8
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 5.9e-120 434.9 354 63.6
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 1.7e-119 433.3 355 63.1
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 6.5e-119 431.4 316 69.0
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 6.5e-119 431.4 317 68.1
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 9.4e-118 427.6 285 69.5
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 1.2e-117 427.2 343 63.8
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 1.6e-117 426.8 339 63.4
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 2.1e-117 426.4 346 63.9
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 2.7e-117 426.0 349 62.5
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 3.6e-117 425.6 297 71.4
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 2.3e-116 422.9 345 62.9
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 2.3e-116 422.9 345 62.9
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 4.0e-116 422.2 336 63.7
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 4.0e-116 422.2 345 63.2
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 5.2e-116 421.8 337 63.5
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 5.2e-116 421.8 345 63.2
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 5.2e-116 421.8 312 67.6
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 6.8e-116 421.4 348 62.6
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 1.2e-115 420.6 336 64.0
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 2.0e-115 419.9 340 62.6
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 1.7e-114 416.8 316 67.4
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 1.1e-113 414.1 333 63.1
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 1.1e-113 414.1 327 61.2
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 1.4e-113 413.7 350 59.1
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 2.4e-113 412.9 334 65.3
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 5.9e-112 408.3 329 63.2
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 7.7e-112 407.9 348 60.3
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 2.9e-111 406.0 338 61.8
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 3.8e-111 405.6 337 62.0
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 3.8e-111 405.6 337 62.0
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 7.3e-110 401.4 337 61.4
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.1e-109 399.8 282 69.9
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 6.1e-109 398.3 355 59.2
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 6.8e-108 394.8 339 61.4
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 9.2e-105 384.4 315 61.3
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 1.2e-99 367.5 347 56.5
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 7.0e-97 358.2 273 64.5
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 1.1e-92 344.4 330 54.2
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 2.3e-92 343.2 307 56.7
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 5.2e-92 342.0 456 46.1
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 2.9e-90 336.3 278 63.7
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 3.7e-90 335.9 315 57.8
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 4.1e-89 332.4 277 58.8
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 1.0e-87 327.8 292 55.8
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 3.9e-87 325.9 264 62.5
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 1.2e-83 314.3 326 51.8
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 3.3e-78 296.2 218 69.3
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 4.3e-78 295.8 184 75.5
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 2.4e-76 290.0 224 67.9
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 2.4e-76 290.0 199 72.4
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 3.1e-76 289.7 190 74.2
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 4.2e-73 279.3 202 67.3
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 1.0e-71 274.6 196 67.9
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 8.1e-69 265.0 283 51.9
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 6.4e-66 255.4 301 45.2
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 3.4e-51 206.5 137 75.2
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 2.8e-45 186.8 151 66.2
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 6.3e-45 185.7 133 69.2
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 1.5e-43 181.0 129 69.0
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.3e-42 177.9 121 69.4
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 2.5e-33 147.1 107 68.2
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 2.1e-32 144.1 88 76.1
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 8.5e-26 122.1 268 28.4
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 2.1e-24 117.5 87 59.8
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 2.0e-19 100.9 286 28.0


User provided reference genes

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