Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6289 Papaver somniferum HOM05D007561 ORTHO05D007661 0.0e+00 1231.5 627 100.0
PSO384G3070 Papaver somniferum HOM05D007561 ORTHO05D007661 8.6e-311 1069.7 604 91.9
TAR561G0001 Trochodendron aralioides HOM05D007561 ORTHO05D007661 4.5e-86 323.2 641 41.5
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 3.1e-58 230.7 667 35.5
PSO675G2416 Papaver somniferum HOM05D007561 ORTHO05D007661 2.6e-57 227.6 672 35.0
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 1.4e-50 205.3 544 37.3
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 1.4e-50 205.3 554 35.2
Aqoxy2G00670 Aquilegia oxysepala HOM05D007561 ORTHO05D007661 7.5e-49 199.5 591 36.9
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 9.8e-49 199.1 541 35.5
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 9.2e-47 192.6 656 31.6
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 1.2e-46 192.2 549 35.9
CAN.G128.129 Capsicum annuum HOM05D007561 ORTHO05D007661 2.3e-45 188.0 511 34.4
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 7.3e-44 183.0 549 35.3
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 9.5e-44 182.6 556 34.9
RhsimUnG0021900 Rhododendron simsii HOM05D007561 ORTHO05D007661 1.1e-42 179.1 483 34.4
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 1.1e-42 179.1 555 34.1
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 9.9e-41 172.6 517 34.8
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 2.9e-40 171.0 558 33.7
Nitab4.5_0000613g0170 Nicotiana tabacum HOM05D007561 ORTHO05D007661 6.4e-40 169.9 619 31.2
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 8.4e-40 169.5 551 33.4
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 1.1e-39 169.1 540 33.7
Migut.J01597 Erythranthe guttata HOM05D007561 ORTHO05D007661 1.9e-39 168.3 553 32.7
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 1.6e-38 165.2 572 32.2
Solyc10g081340.1 Solanum lycopersicum HOM05D007561 ORTHO05D007661 1.3e-37 162.2 515 34.6
DCAR_009109 Daucus carota HOM05D007561 ORTHO05D007661 2.3e-37 161.4 530 32.3
Sopen10g031840 Solanum pennellii HOM05D007561 ORTHO05D007661 3.0e-37 161.0 542 33.8
MSTRG.6258 Avicennia marina HOM05D007561 ORTHO05D007661 1.1e-36 159.1 545 32.8
Nitab4.5_0000811g0050 Nicotiana tabacum HOM05D007561 ORTHO05D007661 3.3e-36 157.5 597 30.8
Sabra07G0062300 Salix brachista HOM05D007561 ORTHO05D007661 5.6e-36 156.8 497 34.6
Thecc.05G190500 Theobroma cacao HOM05D007561 ORTHO05D007661 2.8e-35 154.5 512 33.8
MSTRG.19744 Avicennia marina HOM05D007561 ORTHO05D007661 1.8e-34 151.8 569 30.6
Duzib177G0099 Durio zibethinus HOM05D007561 ORTHO05D007661 1.5e-33 148.7 507 32.9
CiPaw.09G161100 Carya illinoinensis HOM05D007561 ORTHO05D007661 1.7e-32 145.2 529 33.3
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 3.8e-32 144.1 535 33.6
Gorai.012G026500 Gossypium raimondii HOM05D007561 ORTHO05D007661 3.8e-32 144.1 497 33.2
HPP92_021156 Vanilla planifolia HOM05D007561 ORTHO05D007661 1.9e-31 141.7 565 31.2
ClCG10G016860 Citrullus lanatus HOM05D007561 ORTHO05D007661 4.2e-31 140.6 606 29.9
Actinidia18379 Actinidia chinensis HOM05D007561 ORTHO05D007661 1.6e-30 138.7 529 33.6
Peaxi162Scf00575g00079 Petunia axillaris HOM05D007561 ORTHO05D007661 2.1e-30 138.3 535 29.7
MELO3C009692.2 Cucumis melo HOM05D007561 ORTHO05D007661 4.6e-30 137.1 548 32.7
FAN07G2764 Fragaria x ananassa HOM05D007561 ORTHO05D007661 4.6e-30 137.1 556 32.7
FvH4_4g10470 Fragaria vesca HOM05D007561 ORTHO05D007661 6.0e-30 136.7 549 31.3
FAN12G2197 Fragaria x ananassa HOM05D007561 ORTHO05D007661 7.8e-30 136.3 550 31.1
FAN12G0994 Fragaria x ananassa HOM05D007561 ORTHO05D007661 1.3e-29 135.6 549 31.3
FAN22G1656 Fragaria x ananassa HOM05D007561 ORTHO05D007661 1.3e-29 135.6 546 31.3
Gohir.A05G393000 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.3e-29 135.6 435 34.5
GSVIVG01029894001 Vitis vinifera HOM05D007561 ORTHO05D007661 5.1e-29 133.7 470 31.3
SGA_v2.0_scaffold66G22349 Striga asiatica HOM05D007561 ORTHO05D007661 6.6e-29 133.3 469 33.7
AUR62020949 Chenopodium quinoa HOM05D007561 ORTHO05D007661 8.7e-29 132.9 521 30.9
CsaV3_3G039500 Cucumis sativus L. HOM05D007561 ORTHO05D007661 1.1e-28 132.5 551 31.6
FAN17G1891 Fragaria x ananassa HOM05D007561 ORTHO05D007661 4.3e-28 130.6 551 32.3
Sed0023829 Sechium edule HOM05D007561 ORTHO05D007661 7.3e-28 129.8 545 30.1
Gohir.D04G022850 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.6e-27 128.6 437 33.9
SGA_v2.0_scaffold69G23211 Striga asiatica HOM05D007561 ORTHO05D007661 1.6e-27 128.6 461 32.3
Atru.chr8.931 Acer truncatum HOM05D007561 ORTHO05D007661 2.8e-27 127.9 522 30.7
ATR0068G026 Amborella trichopoda HOM05D007561 ORTHO05D007661 2.8e-27 127.9 526 30.8
AUR62018475 Chenopodium quinoa HOM05D007561 ORTHO05D007661 2.8e-27 127.9 525 29.9
Gorai.013G132100 Gossypium raimondii HOM05D007561 ORTHO05D007661 6.2e-27 126.7 502 30.5
Sed0024594 Sechium edule HOM05D007561 ORTHO05D007661 6.9e-26 123.2 526 30.4
RcHm_v2.0_Chr3g0495011 Rosa chinensis HOM05D007561 ORTHO05D007661 1.5e-25 122.1 570 29.8
VMungo1383G3023 Vigna mungo HOM05D007561 ORTHO05D007661 1.5e-25 122.1 590 29.2
Eucgr.A02170 Eucalyptus grandis HOM05D007561 ORTHO05D007661 2.6e-25 121.3 558 29.7
Gohir.D13G117500 Gossypium hirsutum HOM05D007561 ORTHO05D007661 3.4e-25 120.9 501 29.5
Phvul.001G109100 Phaseolus vulgaris HOM05D007561 ORTHO05D007661 9.9e-25 119.4 572 28.8
Lj1g0025432 Lotus japonicus HOM05D007561 ORTHO05D007661 1.3e-24 119.0 503 31.6
Ah.04g149900 Amaranthus hybridus HOM05D007561 ORTHO05D007661 8.4e-24 116.3 493 28.6
PGR042G3351 Punica granatum HOM05D007561 ORTHO05D007661 1.1e-23 115.9 520 31.7
Sc13g0000670 Simmondsia chinensis HOM05D007561 ORTHO05D007661 1.1e-23 115.9 423 32.4
Glyma.19G123300 Glycine max HOM05D007561 ORTHO05D007661 4.2e-23 114.0 527 30.6
Gohir.A13G114700 Gossypium hirsutum HOM05D007561 ORTHO05D007661 9.3e-23 112.8 503 29.8
QL02p091854 Quercus lobata HOM05D007561 ORTHO05D007661 1.2e-22 112.5 425 31.5
Ca_08339_v3 Cicer arietinum L. HOM05D007561 ORTHO05D007661 6.0e-22 110.2 501 31.1
Medtr7g088200 Medicago truncatula HOM05D007561 ORTHO05D007661 7.9e-22 109.8 540 30.7
Psat3g083040 Pisum sativum HOM05D007561 ORTHO05D007661 6.7e-21 106.7 547 29.3
Glyma.03G118900 Glycine max HOM05D007561 ORTHO05D007661 6.2e-19 100.1 543 28.2
Lalb_Chr22g0358291 Lupinus albus HOM05D007561 ORTHO05D007661 5.3e-18 97.1 592 27.2
Hma1.2p1_1686F.1_g297500 Hydrangea macrophylla HOM05D007561 ORTHO05D007661 2.2e-16 91.7 453 29.6
PGR042G3883 Punica granatum HOM05D007561 ORTHO05D007661 6.4e-16 90.1 390 32.3
SEGI_17426 Sequoiadendron giganteum HOM05D007561 ORTHO05D007661 7.1e-15 86.7 523 27.2
Peaxi162Scf00541g00022 Petunia axillaris HOM05D002654 ORTHO05D002430 5.1e-13 80.5 545 24.6
PGR142G0684 Punica granatum HOM05D007561 ORTHO05D007661 1.1e-12 79.3 432 30.8
SEGI_34192 Sequoiadendron giganteum HOM05D035901 ORTHO05D007661 1.5e-12 79.0 545 26.2
unitig_899.g15656 Utricularia gibba HOM05D007561 ORTHO05D007661 4.3e-12 77.4 154 40.9
COL.COLO4_05647 Corchorus olitorius HOM05D007561 ORTHO05D007661 7.4e-12 76.6 240 34.2
MBI15_g01650_MAGBIO Magnolia biondii HOM05D007561 ORTHO05D007661 1.6e-11 75.5 114 47.4
Cfa019892 Carpinus fangiana HOM05D007561 ORTHO05D007661 2.1e-11 75.1 483 25.3
TAR629G0269 Trochodendron aralioides HOM05D002654 ORTHO05D002430 4.8e-11 73.9 574 26.0
Migut.K00204 Erythranthe guttata HOM05D007561 ORTHO05D007661 1.4e-10 72.4 503 27.4
CARHR209070 Cardamine hirsuta HOM05D011214 ORTHO05D007661 4.0e-10 70.9 520 26.2
BcaC06g32122 Brassica carinata HOM05D011214 ORTHO05D007661 5.3e-10 70.5 500 25.8
Thhalv10015710m.g Eutrema salsugineum HOM05D011214 ORTHO05D007661 5.3e-10 70.5 547 26.3
THA.LOC104816415 Tarenaya hassleriana HOM05D011214 ORTHO05D007661 5.3e-10 70.5 490 26.3
TAR371G1053 Trochodendron aralioides HOM05D002654 ORTHO05D002430 1.5e-09 68.9 609 25.3
A10p31950 Brassica napus HOM05D011214 ORTHO05D007661 3.4e-09 67.8 511 26.8
Glyma.08G300500 Glycine max HOM05D002654 ORTHO05D002430 4.5e-09 67.4 527 23.5
AT5G04190 Arabidopsis thaliana HOM05D011214 ORTHO05D007661 5.8e-09 67.0 499 25.3
BcaB05g21770 Brassica carinata HOM05D011214 ORTHO05D007661 7.6e-09 66.6 514 26.3
BcaC06g32123 Brassica carinata HOM05D011214 ORTHO05D007661 1.0e-08 66.2 482 25.9
SEGI_32896 Sequoiadendron giganteum HOM05D000006 ORTHO05D007661 1.3e-08 65.9 487 24.6
BraA10t45239Z Brassica rapa HOM05D011214 ORTHO05D007661 1.7e-08 65.5 512 27.0
CANSAT78G1013 Cannabis sativa HOM05D007561 ORTHO05D007661 1.7e-08 65.5 530 25.8
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 2.2e-08 65.1 492 26.2
Prupe.7G023100 Prunus persica HOM05D007561 ORTHO05D007661 2.9e-08 64.7 149 36.2
TPR.G23681 Trifolium pratense HOM05D007561 ORTHO05D007661 2.9e-08 64.7 220 33.6
Carub.0006s0314 Capsella rubella HOM05D011214 ORTHO05D007661 3.8e-08 64.3 511 25.8
BolC9t60006H Brassica oleracea HOM05D011214 ORTHO05D007661 4.9e-08 63.9 511 25.8
MBI02_g39064_MAGBIO Magnolia biondii HOM05D002654 ORTHO05D002430 4.9e-08 63.9 422 27.0
MD12G1110900 Malus domestica HOM05D007561 ORTHO05D007661 6.5e-08 63.5 583 26.2
AL6G13810 Arabidopsis lyrata HOM05D011214 ORTHO05D007661 8.4e-08 63.2 497 25.6
DCAR_016891 Daucus carota HOM05D007561 ORTHO05D007661 1.1e-07 62.8 107 40.2
MBI14_g08053_MAGBIO Magnolia biondii HOM05D007561 ORTHO05D007661 1.1e-07 62.8 117 44.4
C09p72660 Brassica napus HOM05D011214 ORTHO05D007661 1.4e-07 62.4 511 25.2
MD16G1073600 Malus domestica HOM05D002654 ORTHO05D002430 1.9e-07 62.0 496 26.2
MELO3C012089.2 Cucumis melo HOM05D002654 ORTHO05D002430 3.2e-07 61.2 248 29.0
Duzib251G0139 Durio zibethinus HOM05D002654 ORTHO05D002430 3.2e-07 61.2 489 25.2
Potri.015G062600 Populus trichocarpa HOM05D002654 ORTHO05D002430 3.2e-07 61.2 499 25.9
Zm00001eb333260 Zea mays HOM05D007561 ORTHO05D007661 4.2e-07 60.8 443 26.4
Gohir.D02G125400 Gossypium hirsutum HOM05D002654 ORTHO05D002430 5.5e-07 60.5 251 29.1
Rhsim12G0063400 Rhododendron simsii HOM05D002654 ORTHO05D002430 5.5e-07 60.5 533 25.0
CDE04G0982 Ceratophyllum demersum HOM05D007561 ORTHO05D007661 7.1e-07 60.1 323 28.2
Dinv38698 Davidia involucrata HOM05D002654 ORTHO05D002430 7.1e-07 60.1 158 32.9
CSS0046015 Camellia sinensis var. sinensis HOM05D002654 ORTHO05D002430 9.3e-07 59.7 252 28.6
Sabra15G0087900 Salix brachista HOM05D002654 ORTHO05D002430 9.3e-07 59.7 484 25.2
Manes.06G093600 Manihot esculenta HOM05D002654 ORTHO05D002430 1.6e-06 58.9 491 25.1
QL03p064352 Quercus lobata HOM05D002654 ORTHO05D002430 1.6e-06 58.9 596 24.5
Sp6g38560 Schrenkiella parvula HOM05D011214 ORTHO05D007661 1.6e-06 58.9 520 24.8
CsaV3_5G032620 Cucumis sativus L. HOM05D002654 ORTHO05D002430 2.1e-06 58.5 145 34.5
Sc04g0008200 Simmondsia chinensis HOM05D002654 ORTHO05D002430 2.1e-06 58.5 544 25.4
ClCG05G024340 Citrullus lanatus HOM05D002654 ORTHO05D002430 2.7e-06 58.2 192 29.2
Gohir.D13G074166 Gossypium hirsutum HOM05D002654 ORTHO05D002430 3.5e-06 57.8 219 27.9
Gorai.005G141100 Gossypium raimondii HOM05D002654 ORTHO05D002430 3.5e-06 57.8 252 29.0
QL03p062934 Quercus lobata HOM05D002654 ORTHO05D002430 3.5e-06 57.8 599 24.9
Thecc.02G347200 Theobroma cacao HOM05D002654 ORTHO05D002430 3.5e-06 57.8 300 27.7


User provided reference genes

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