Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 3.7e-280 967.6 511 100.0
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 2.4e-279 964.9 511 99.4
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 8.1e-251 870.2 511 87.5
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.8e-248 861.3 511 87.7
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 4.9e-248 860.9 512 87.9
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.9e-247 859.0 511 87.9
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 2.4e-247 858.6 511 88.1
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 4.2e-247 857.8 512 87.9
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 9.3e-247 856.7 512 87.7
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 9.3e-247 856.7 511 87.1
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.6e-246 855.9 511 88.1
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.6e-246 855.9 511 86.7
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 2.7e-246 855.1 511 87.7
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 7.8e-246 853.6 512 86.5
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.0e-245 853.2 512 87.3
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.3e-245 852.8 511 87.1
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 1.7e-245 852.4 511 86.3
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 2.3e-245 852.0 511 86.1
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 3.9e-245 851.3 511 86.3
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 5.1e-245 850.9 512 87.3
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 8.7e-245 850.1 511 86.7
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 1.1e-244 849.7 511 86.5
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 1.9e-244 849.0 511 85.9
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.6e-243 845.9 511 85.9
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 1.6e-243 845.9 511 86.5
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 1.6e-243 845.9 511 85.5
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 3.6e-243 844.7 511 86.1
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 4.8e-243 844.3 513 85.6
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 4.8e-243 844.3 511 86.3
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 8.1e-243 843.6 511 84.9
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.1e-242 843.2 511 85.7
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 1.4e-242 842.8 511 86.9
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 1.8e-242 842.4 511 85.3
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 2.4e-242 842.0 511 85.7
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 2.4e-242 842.0 511 85.7
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 3.1e-242 841.6 511 85.7
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.1e-242 841.6 511 85.7
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 4.0e-242 841.3 511 85.3
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 4.0e-242 841.3 511 85.7
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 5.3e-242 840.9 511 85.5
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 6.9e-242 840.5 511 84.0
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 9.0e-242 840.1 511 85.3
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 1.2e-241 839.7 511 85.1
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 1.5e-241 839.3 511 85.1
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.5e-241 839.3 511 85.1
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 2.0e-241 839.0 511 84.7
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 3.4e-241 838.2 511 84.3
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 5.8e-241 837.4 511 85.5
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 5.8e-241 837.4 511 85.5
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 5.8e-241 837.4 511 85.5
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 5.8e-241 837.4 511 84.5
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 7.6e-241 837.0 511 84.3
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 1.3e-240 836.3 511 84.7
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 1.7e-240 835.9 512 85.7
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.7e-240 835.9 511 84.5
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 1.7e-240 835.9 511 84.5
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 2.2e-240 835.5 511 84.3
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 2.2e-240 835.5 510 84.7
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 2.2e-240 835.5 511 85.1
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 2.9e-240 835.1 511 84.7
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.9e-240 835.1 511 84.1
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 2.9e-240 835.1 511 84.5
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 2.9e-240 835.1 511 84.7
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 3.8e-240 834.7 511 84.1
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 4.9e-240 834.3 511 84.0
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 4.9e-240 834.3 511 84.0
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 8.4e-240 833.6 511 84.3
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 2.4e-239 832.0 511 84.5
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 2.4e-239 832.0 511 84.1
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 4.2e-239 831.2 511 83.8
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 5.4e-239 830.9 511 84.3
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 7.1e-239 830.5 511 84.0
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 9.3e-239 830.1 511 84.7
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.2e-238 829.7 511 84.1
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.2e-238 829.7 511 83.6
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 1.6e-238 829.3 511 84.3
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 2.1e-238 828.9 511 83.6
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 1.0e-237 826.6 511 83.8
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 2.3e-237 825.5 511 84.7
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 3.9e-237 824.7 512 83.8
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 1.5e-236 822.8 528 83.0
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.9e-236 822.4 511 83.8
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 3.3e-236 821.6 511 82.8
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 1.3e-235 819.7 511 84.0
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 1.6e-235 819.3 512 83.6
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 2.1e-235 818.9 550 78.7
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 3.6e-235 818.1 511 84.1
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 3.6e-235 818.1 511 84.1
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 4.8e-235 817.8 511 83.2
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.8e-235 817.8 511 83.2
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.8e-235 817.8 511 83.2
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 4.8e-235 817.8 511 83.4
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 8.1e-235 817.0 511 83.2
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 1.1e-234 816.6 511 84.0
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 4.0e-234 814.7 511 83.0
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 5.3e-234 814.3 511 83.0
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 1.5e-233 812.8 511 82.4
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 5.8e-233 810.8 511 82.0
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 7.6e-233 810.4 511 81.2
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 9.9e-233 810.1 511 81.8
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.7e-232 809.3 511 80.8
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 2.2e-232 808.9 511 81.4
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 3.8e-232 808.1 523 80.3
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 4.9e-232 807.7 512 81.6
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 4.9e-232 807.7 495 85.1
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 1.6e-230 802.7 506 83.8
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.6e-230 802.7 500 83.8
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.7e-230 802.0 511 82.2
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 4.6e-230 801.2 511 81.8
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 4.6e-230 801.2 511 81.8
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 6.0e-230 800.8 511 81.6
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 1.3e-229 799.7 511 81.6
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 1.3e-229 799.7 509 83.7
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 2.3e-229 798.9 495 84.4
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 2.1e-227 792.3 511 79.5
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.0e-226 788.1 495 83.2
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 6.9e-226 787.3 487 83.6
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 9.0e-226 786.9 509 80.0
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 3.4e-225 785.0 557 77.2
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 7.6e-225 783.9 473 86.9
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 3.2e-223 778.5 495 83.6
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 7.1e-223 777.3 548 76.8
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 3.7e-219 765.0 512 79.3
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.9e-215 752.7 512 77.1
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 7.2e-215 750.7 511 77.5
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 2.5e-212 742.3 511 77.9
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 4.3e-212 741.5 525 76.8
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 4.3e-212 741.5 525 76.8
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 8.8e-205 717.2 441 84.4
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 3.1e-194 682.2 473 78.6
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 9.1e-194 680.6 512 73.0
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 5.9e-193 677.9 514 66.0
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 4.2e-191 671.8 504 72.4
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.4e-191 670.6 511 71.4
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 6.7e-189 664.5 414 84.5
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.6e-185 653.3 503 68.0
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.7e-176 623.2 514 62.1
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 2.8e-171 605.9 469 69.1
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 5.4e-170 601.7 376 84.0
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 3.8e-168 595.5 519 60.9
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 3.8e-168 595.5 379 80.7
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.2e-166 590.5 494 60.9
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 2.8e-166 589.3 511 59.9
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 2.2e-163 579.7 365 83.3
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.1e-162 577.4 366 81.7
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 1.4e-157 560.5 504 63.1
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 5.2e-157 558.5 325 89.2
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 3.2e-154 549.3 499 55.5
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 8.6e-152 541.2 345 82.3
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 1.3e-144 517.3 307 88.6
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.1e-143 514.2 458 64.8
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.1e-137 493.4 284 89.4
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 1.4e-133 480.7 383 63.7
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 9.9e-116 421.4 516 46.7
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 8.7e-112 408.3 255 83.1
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.5e-111 407.5 245 85.7
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 4.6e-105 386.0 487 44.6
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.8e-104 384.0 386 54.7
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.7e-99 367.5 279 70.3
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 3.0e-96 356.7 519 38.5
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.3e-78 298.1 199 81.4
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-70 270.8 343 46.9
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 9.8e-63 245.4 504 36.7
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 3.8e-59 233.4 144 83.3
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 6.1e-57 226.1 313 44.7
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 3.7e-54 216.9 365 41.1
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 4.9e-46 189.9 117 81.2
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.8e-45 188.0 206 51.0
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.0e-43 182.2 150 70.7
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.1e-42 178.7 197 51.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 8.9e-32 142.5 106 71.7
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.4e-31 140.6 119 58.0
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 6.4e-30 136.3 82 87.8
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 2.7e-20 104.4 121 58.7
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 3.3e-10 70.9 63 57.1
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 5.6e-10 70.1 39 84.6
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 1.1e-08 65.9 37 83.8
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 2.0e-07 61.6 38 84.2


User provided reference genes

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