Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 7.8e-143 510.8 318 100.0
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 5.4e-136 488.0 318 85.8
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 2.0e-45 187.2 263 46.0
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 2.8e-44 183.3 271 43.2
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 2.8e-44 183.3 263 44.9
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 1.0e-41 174.9 268 43.7
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 2.1e-39 167.2 274 40.9
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 1.8e-38 164.1 276 42.4
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 4.4e-37 159.5 272 39.0
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 5.7e-37 159.1 262 41.2
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 9.8e-37 158.3 262 41.2
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 4.8e-36 156.0 269 38.7
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 4.8e-36 156.0 257 38.1
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 4.8e-36 156.0 269 38.7
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 8.3e-36 155.2 279 41.2
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 3.1e-35 153.3 284 38.0
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 2.7e-34 150.2 282 39.4
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 1.1e-32 144.8 265 39.6
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 1.1e-32 144.8 264 42.4
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 1.5e-32 144.4 234 40.6
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 4.2e-32 142.9 324 33.0
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 4.2e-32 142.9 279 39.1
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 5.5e-32 142.5 279 37.6
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.2e-31 141.4 265 40.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.2e-31 141.4 265 40.4
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 1.2e-31 141.4 284 36.6
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 6.1e-31 139.0 234 39.7
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 8.0e-31 138.7 280 37.9
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 1.4e-30 137.9 293 36.9
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 2.3e-30 137.1 269 39.4
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 3.0e-30 136.7 297 44.8
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 6.8e-30 135.6 277 37.2
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 8.9e-30 135.2 282 36.2
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 8.9e-30 135.2 268 36.9
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 2.6e-29 133.7 165 50.9
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 3.4e-29 133.3 206 42.2
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 4.4e-29 132.9 263 36.5
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 5.7e-29 132.5 215 40.5
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 5.7e-29 132.5 235 40.0
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 2.2e-28 130.6 281 38.1
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 4.9e-28 129.4 163 49.1
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 4.9e-28 129.4 192 41.1
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 8.3e-28 128.6 280 42.1
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 1.4e-27 127.9 267 35.6
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.8e-27 127.5 193 43.0
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.8e-27 127.5 243 38.3
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.1e-27 126.3 196 40.8
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 5.4e-27 125.9 321 32.1
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.2e-26 124.8 198 42.4
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.2e-26 124.8 243 37.9
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 1.2e-26 124.8 284 35.6
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 2.7e-26 123.6 161 44.7
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 2.7e-26 123.6 251 38.6
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 4.5e-26 122.9 277 35.0
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 4.5e-26 122.9 155 46.5
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.5e-26 122.9 155 46.5
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 4.5e-26 122.9 155 46.5
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 1.0e-25 121.7 267 35.2
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 1.0e-25 121.7 189 41.8
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 1.3e-25 121.3 279 35.5
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 2.3e-25 120.6 155 50.3
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 3.9e-25 119.8 260 36.2
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 5.0e-25 119.4 219 40.2
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 5.0e-25 119.4 302 39.7
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 6.6e-25 119.0 161 51.6
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 6.6e-25 119.0 273 34.1
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 8.6e-25 118.6 161 43.5
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 1.1e-24 118.2 161 43.5
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 1.1e-24 118.2 281 37.0
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 1.5e-24 117.9 257 32.7
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 1.6e-23 114.4 257 32.7
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 2.1e-23 114.0 261 34.9
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 2.8e-23 113.6 257 35.4
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 2.8e-23 113.6 250 36.8
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 2.8e-23 113.6 213 39.4
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 2.8e-23 113.6 210 39.5
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 3.6e-23 113.2 328 33.5
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 1.0e-22 111.7 255 40.8
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 1.8e-22 110.9 254 31.5
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 1.8e-22 110.9 235 35.7
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 2.3e-22 110.5 219 35.6
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 4.0e-22 109.8 225 34.7
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 6.8e-22 109.0 183 43.2
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 1.2e-21 108.2 218 36.2
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 5.8e-21 105.9 271 32.8
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 5.8e-21 105.9 203 36.9
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 1.3e-20 104.8 253 34.0
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 2.2e-20 104.0 216 39.8
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.2e-20 104.0 316 30.1
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 8.3e-20 102.1 269 33.1
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 1.4e-19 101.3 266 34.2
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 2.4e-19 100.5 211 36.0
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 5.4e-19 99.4 206 34.5
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 7.0e-19 99.0 192 38.0
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 7.0e-19 99.0 255 33.7
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.2e-18 98.2 303 28.7
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 2.7e-18 97.1 204 38.2
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 2.7e-18 97.1 204 35.8
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 4.6e-18 96.3 153 39.2
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 6.0e-18 95.9 176 51.1
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 7.8e-18 95.5 134 41.8
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 1.7e-17 94.4 204 38.7
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 2.3e-17 94.0 184 38.6
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 2.3e-17 94.0 227 34.4
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 3.9e-17 93.2 131 48.1
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 3.9e-17 93.2 242 33.1
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 8.6e-17 92.0 199 35.2
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 1.1e-16 91.7 222 34.7
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 1.5e-16 91.3 221 31.7
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 3.3e-16 90.1 137 40.9
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 4.3e-16 89.7 226 34.5
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 9.5e-16 88.6 132 42.4
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 9.5e-16 88.6 171 35.1
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 1.2e-15 88.2 249 34.5
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 6.2e-15 85.9 343 27.1
Rhsim06G0015600 Rhododendron simsii HOM05D004925 ORTHO05D005643 3.1e-14 83.6 291 25.4
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 4.0e-14 83.2 156 37.8
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 8.9e-14 82.0 242 30.6
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 2.0e-13 80.9 247 32.8
CDE06G1226 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 3.4e-13 80.1 261 30.3
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 3.4e-13 80.1 171 38.0
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 1.4e-11 74.7 94 45.7
Aa31LG1G19930 Aethionema arabicum HOM05D004925 ORTHO05D005643 2.4e-11 73.9 247 28.3
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 1.6e-10 71.2 232 30.2
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 1.0e-09 68.6 58 60.3
AL1G14650 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 3.0e-09 67.0 211 31.8
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 8.6e-09 65.5 150 33.3
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 3.3e-08 63.5 118 33.9
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 7.3e-08 62.4 187 31.0
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 2.1e-07 60.8 101 38.6
SMO137G0159 Selaginella moellendorffii HOM05D004925 ORTHO05D005643 1.8e-06 57.8 234 30.3
CSS0038538 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 2.3e-06 57.4 42 54.8
Oeu013586.1 Olea europaea HOM05D004925 ORTHO05D005643 3.1e-06 57.0 52 48.1
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 5.2e-06 56.2 136 31.6


User provided reference genes

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