Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 5.1e-202 707.6 376 100.0
PSO384G5133 Papaver somniferum HOM05D003726 ORTHO05D003520 1.6e-142 510.0 290 92.1
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 2.4e-42 177.2 434 35.9
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.9e-40 170.2 391 35.3
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 3.6e-38 163.3 408 35.5
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 9.2e-34 148.7 457 33.0
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 1.2e-30 138.3 445 29.4
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 5.2e-29 132.9 439 30.1
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 6.8e-29 132.5 434 31.8
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.2e-28 131.7 416 30.0
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 9.2e-26 122.1 451 29.7
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 2.7e-25 120.6 444 29.7
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.5e-25 120.2 432 30.3
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 4.6e-25 119.8 432 30.6
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 4.6e-25 119.8 436 29.6
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.9e-25 119.4 430 30.7
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 5.9e-25 119.4 410 29.0
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.3e-24 117.5 383 30.5
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 5.0e-24 116.3 324 34.9
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 5.6e-23 112.8 187 43.9
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 7.3e-23 112.5 429 26.8
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 1.0e-21 108.6 409 27.1
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.4e-21 108.2 428 29.2
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.8e-21 107.8 383 28.7
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 4.0e-21 106.7 390 28.5
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 5.2e-21 106.3 417 29.5
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 6.8e-21 105.9 428 27.8
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 6.8e-21 105.9 430 29.1
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 8.9e-21 105.5 407 29.0
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 2.6e-20 104.0 283 33.9
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 2.6e-20 104.0 398 28.1
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 3.4e-20 103.6 411 29.9
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 3.4e-20 103.6 374 27.0
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 4.4e-20 103.2 408 28.2
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 9.8e-20 102.1 226 34.1
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 2.9e-19 100.5 400 29.2
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.9e-19 100.5 378 29.4
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 2.9e-19 100.5 393 29.5
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 3.7e-19 100.1 373 28.7
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.7e-19 100.1 408 30.1
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.7e-19 100.1 408 30.1
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 4.9e-19 99.8 383 29.2
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 6.4e-19 99.4 402 26.9
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 8.3e-19 99.0 398 28.1
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 2.4e-18 97.4 441 29.0
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 7.0e-18 95.9 381 27.6
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 9.2e-18 95.5 400 28.0
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 9.2e-18 95.5 401 27.9
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.6e-17 94.7 400 27.5
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.6e-17 94.7 381 27.6
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.6e-17 94.7 458 28.4
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 2.7e-17 94.0 423 27.7
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.7e-17 94.0 374 28.9
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.5e-17 93.6 399 27.6
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 6.0e-17 92.8 392 26.0
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.0e-16 92.0 403 27.8
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 1.0e-16 92.0 421 28.0
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.0e-16 92.0 367 28.9
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.7e-16 91.3 460 24.8
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.7e-16 91.3 389 25.2
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 5.0e-16 89.7 466 27.5
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 6.6e-16 89.4 338 25.1
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 6.6e-16 89.4 338 25.1
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 6.6e-16 89.4 337 24.3
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.9e-15 87.8 422 28.7
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 1.9e-15 87.8 367 29.7
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 5.6e-15 86.3 362 28.5
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 5.6e-15 86.3 412 27.4
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 7.3e-15 85.9 367 26.7
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 9.5e-15 85.5 380 27.9
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 9.5e-15 85.5 426 25.6
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 2.1e-14 84.3 452 26.3
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.8e-14 84.0 407 25.8
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.6e-14 83.6 415 26.5
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.6e-14 83.6 380 27.9
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 4.7e-14 83.2 381 26.5
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 1.1e-13 82.0 380 27.6
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 1.1e-13 82.0 397 26.2
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.4e-13 81.6 434 25.6
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 2.3e-13 80.9 409 27.9
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 2.3e-13 80.9 369 27.1
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 2.3e-13 80.9 146 39.0
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.3e-13 80.9 394 26.4
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.1e-13 80.5 383 27.2
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 3.1e-13 80.5 417 26.9
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 4.0e-13 80.1 405 27.4
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 4.0e-13 80.1 430 25.3
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 6.8e-13 79.3 399 26.1
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 6.8e-13 79.3 354 26.3
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 6.8e-13 79.3 392 28.1
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.2e-12 78.6 393 26.0
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 1.2e-12 78.6 169 33.7
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 1.5e-12 78.2 429 24.9
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.5e-12 78.2 354 26.3
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 1.5e-12 78.2 424 26.9
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 2.0e-12 77.8 393 24.2
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 2.0e-12 77.8 414 25.6
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.0e-12 77.8 181 32.6
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 2.6e-12 77.4 198 31.3
Lsat_1_v5_gn_8_70880 Lactuca sativa HOM05D003726 ORTHO05D003520 4.4e-12 76.6 365 26.3
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 4.4e-12 76.6 393 24.4
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 5.8e-12 76.3 362 27.6
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 9.8e-12 75.5 230 31.7
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 9.8e-12 75.5 427 23.4
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 1.3e-11 75.1 168 33.9
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 1.3e-11 75.1 401 26.2
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 1.7e-11 74.7 367 27.0
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 2.2e-11 74.3 374 26.5
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 2.2e-11 74.3 419 24.1
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 2.9e-11 73.9 428 25.5
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 3.7e-11 73.6 408 27.2
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 4.9e-11 73.2 155 32.3
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 6.4e-11 72.8 380 27.1
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 8.3e-11 72.4 417 25.4
ECA236G2409 Erigeron canadensis HOM05D000674 ORTHO05D001490 1.1e-10 72.0 310 27.7
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 1.9e-10 71.2 167 33.5
AT5G58630 Arabidopsis thaliana HOM05D011448 ORTHO05D003520 2.4e-10 70.9 375 23.7
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.4e-10 70.9 415 26.0
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 4.1e-10 70.1 198 30.8
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 7.1e-10 69.3 152 32.2
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 9.2e-10 68.9 401 26.4
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 2.1e-09 67.8 130 35.4
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 2.1e-09 67.8 148 30.4
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 2.1e-09 67.8 435 23.4
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 2.1e-09 67.8 416 24.5
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 2.7e-09 67.4 363 26.4
HanXRQChr05g0135801 Helianthus annuus HOM05D003726 ORTHO05D003520 2.7e-09 67.4 231 28.6
C09p50710 Brassica napus HOM05D011448 ORTHO05D003520 3.5e-09 67.0 360 25.8
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 3.5e-09 67.0 364 23.6
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 6.0e-09 66.2 362 25.4
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 6.0e-09 66.2 362 25.4
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 6.0e-09 66.2 312 26.6
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 6.0e-09 66.2 345 27.0
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 7.8e-09 65.9 379 25.1
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.3e-08 65.1 417 22.1
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.3e-08 65.1 418 22.7
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.7e-08 64.7 362 24.3
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 2.3e-08 64.3 268 29.1
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 3.9e-08 63.5 408 24.3
BraA10t43670Z Brassica rapa HOM05D011448 ORTHO05D003520 8.6e-08 62.4 363 25.1
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 8.6e-08 62.4 159 31.4
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 8.6e-08 62.4 463 24.2
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 8.6e-08 62.4 421 25.2
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 1.1e-07 62.0 353 26.6
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.5e-07 61.6 380 25.0
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 2.5e-07 60.8 358 25.1
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 3.3e-07 60.5 358 23.2
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 7.3e-07 59.3 263 26.2
Carub.0008s1925 Capsella rubella HOM05D011448 ORTHO05D003520 9.5e-07 58.9 295 25.1
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 9.5e-07 58.9 428 22.0
CDE08G1412 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 1.2e-06 58.5 436 25.5
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 1.2e-06 58.5 450 24.0
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 2.8e-06 57.4 154 31.2
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 2.8e-06 57.4 154 31.2
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 3.6e-06 57.0 168 28.0
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.7e-06 56.6 423 22.5
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 6.2e-06 56.2 186 29.0
CDE04G1884 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 8.1e-06 55.8 427 21.8


User provided reference genes

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