Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6042 Papaver somniferum HOM05D006152 ORTHO05D008137 1.3e-243 845.9 416 100.0
PSO384G3563 Papaver somniferum HOM05D006152 ORTHO05D008137 4.3e-149 531.9 278 94.6
PSO384G4708 Papaver somniferum HOM05D006152 ORTHO05D008137 4.3e-149 531.9 278 94.6
Aqoxy1G03917 Aquilegia oxysepala HOM05D006152 ORTHO05D008137 1.6e-103 380.6 278 68.0
Actinidia38346 Actinidia chinensis HOM05D006152 ORTHO05D008137 7.9e-103 378.3 276 67.4
TWI32G1323 Tripterygium wilfordii HOM05D006152 ORTHO05D008137 1.3e-102 377.5 278 68.3
Ciclev10008799m.g Citrus clementina HOM05D006152 ORTHO05D008137 8.7e-102 374.8 277 69.0
Nn2g12295 Nelumbo nucifera HOM05D006152 ORTHO05D008137 1.1e-101 374.4 282 69.1
CSS0018805 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 1.5e-101 374.0 276 67.4
Thecc.09G035000 Theobroma cacao HOM05D006152 ORTHO05D008137 7.4e-101 371.7 278 67.3
CiPaw.16G115700 Carya illinoinensis HOM05D006152 ORTHO05D008137 2.1e-100 370.2 277 69.3
QL02p092448 Quercus lobata HOM05D006152 ORTHO05D008137 3.6e-100 369.4 277 67.1
Prupe.7G259100 Prunus persica HOM05D006152 ORTHO05D008137 1.4e-99 367.5 278 67.3
Rhsim01G0042700 Rhododendron simsii HOM05D006152 ORTHO05D008137 1.4e-99 367.5 295 63.7
Manes.06G038100 Manihot esculenta HOM05D006152 ORTHO05D008137 3.1e-99 366.3 277 66.4
Gohir.D05G052200 Gossypium hirsutum HOM05D006152 ORTHO05D008137 6.9e-99 365.2 278 66.2
Lj7A453G70 Lonicera japonica HOM05D006152 ORTHO05D008137 6.9e-99 365.2 278 63.3
MD02G1011000 Malus domestica HOM05D006152 ORTHO05D008137 9.0e-99 364.8 278 66.9
Gohir.A05G050600 Gossypium hirsutum HOM05D006152 ORTHO05D008137 2.0e-98 363.6 284 64.8
CSS0025720 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 2.2e-97 360.1 301 60.8
Gorai.009G054000 Gossypium raimondii HOM05D006152 ORTHO05D008137 6.4e-97 358.6 289 64.0
FvH4_1g01320 Fragaria vesca HOM05D006152 ORTHO05D008137 2.4e-96 356.7 278 64.7
RcHm_v2.0_Chr2g0086151 Rosa chinensis HOM05D006152 ORTHO05D008137 3.2e-96 356.3 278 65.1
Sc14g0000030 Simmondsia chinensis HOM05D006152 ORTHO05D008137 5.5e-96 355.5 281 62.6
Cc06_g15390 Coffea canephora HOM05D006152 ORTHO05D008137 7.1e-96 355.1 277 62.8
Solyc07g005120.3 Solanum lycopersicum HOM05D006152 ORTHO05D008137 2.1e-95 353.6 278 62.2
MD15G1156000 Malus domestica HOM05D006152 ORTHO05D008137 2.7e-95 353.2 280 65.0
Sabra06G0143900 Salix brachista HOM05D006152 ORTHO05D008137 3.5e-95 352.8 319 58.6
Sabra06G0145100 Salix brachista HOM05D006152 ORTHO05D008137 3.5e-95 352.8 319 58.6
Sopen07g001260 Solanum pennellii HOM05D006152 ORTHO05D008137 4.6e-95 352.4 278 61.9
MSTRG.26302 Avicennia marina HOM05D006152 ORTHO05D008137 7.9e-95 351.7 276 63.8
HanXRQChr10g0314551 Helianthus annuus HOM05D006152 ORTHO05D008137 1.1e-93 347.8 281 63.0
Haze_19246 Corylus avellana HOM05D006152 ORTHO05D008137 2.5e-93 346.7 274 65.3
Oeu043492.1 Olea europaea HOM05D006152 ORTHO05D008137 3.3e-93 346.3 276 63.4
Eucgr.C00382 Eucalyptus grandis HOM05D006152 ORTHO05D008137 8.1e-92 341.7 275 63.3
ATR0184G013 Amborella trichopoda HOM05D006152 ORTHO05D008137 3.1e-91 339.7 279 59.9
Migut.K00351 Erythranthe guttata HOM05D006152 ORTHO05D008137 4.0e-91 339.3 276 62.3
Rhsim01G0046600 Rhododendron simsii HOM05D006152 ORTHO05D008137 4.0e-91 339.3 305 58.7
arahy.Tifrunner.gnm1.ann1.L77CZK Arachis hypogaea HOM05D006152 ORTHO05D008137 9.0e-91 338.2 281 61.6
arahy.Tifrunner.gnm1.ann1.QAR9AW Arachis hypogaea HOM05D006152 ORTHO05D008137 9.0e-91 338.2 281 61.6
DCAR_019366 Daucus carota HOM05D006152 ORTHO05D008137 9.0e-91 338.2 277 62.1
Peaxi162Scf00347g00517 Petunia axillaris HOM05D006152 ORTHO05D008137 9.0e-91 338.2 293 58.0
Glyma.13G155700 Glycine max HOM05D006152 ORTHO05D008137 1.2e-90 337.8 280 62.1
FAN23G2003 Fragaria x ananassa HOM05D006152 ORTHO05D008137 1.5e-90 337.4 282 61.0
CsaV3_2G003440 Cucumis sativus L. HOM05D006152 ORTHO05D008137 3.4e-90 336.3 279 59.9
TPR.G37046 Trifolium pratense HOM05D006152 ORTHO05D008137 1.3e-89 334.3 278 60.8
Lj4g0021784 Lotus japonicus HOM05D006152 ORTHO05D008137 2.2e-89 333.6 278 60.4
TPR.G6509 Trifolium pratense HOM05D006152 ORTHO05D008137 4.9e-89 332.4 279 59.5
Lalb_Chr12g0198561 Lupinus albus HOM05D006152 ORTHO05D008137 1.1e-88 331.3 278 60.8
Hund21620 Selenicereus undatus HOM05D006152 ORTHO05D008137 1.4e-88 330.9 277 61.4
vmacro13046 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 1.2e-87 327.8 312 56.1
vmacro23231 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 1.2e-87 327.8 312 56.1
Lsat_1_v5_gn_5_90820 Lactuca sativa HOM05D006152 ORTHO05D008137 2.1e-87 327.0 280 61.8
Thhalv10014084m.g Eutrema salsugineum HOM05D006152 ORTHO05D008137 4.6e-87 325.9 283 59.0
Medtr4g131670 Medicago truncatula HOM05D006152 ORTHO05D008137 7.9e-87 325.1 278 60.4
Sp6g19860 Schrenkiella parvula HOM05D006152 ORTHO05D008137 3.9e-86 322.8 278 57.9
Carub.0008s1874 Capsella rubella HOM05D006152 ORTHO05D008137 5.1e-86 322.4 278 60.8
unitig_899.g15450 Utricularia gibba HOM05D006152 ORTHO05D003911 5.1e-86 322.4 278 57.9
CARHR272000 Cardamine hirsuta HOM05D006152 ORTHO05D008137 6.7e-86 322.0 278 59.7
A02p07870 Brassica napus HOM05D006152 ORTHO05D008137 1.1e-85 321.2 278 58.6
Sed0008154 Sechium edule HOM05D006152 ORTHO05D008137 1.9e-85 320.5 280 57.9
Phvul.003G158400 Phaseolus vulgaris HOM05D006152 ORTHO05D008137 2.5e-85 320.1 279 59.5
Hma1.2p1_0222F.1_g093200 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 3.3e-85 319.7 221 70.6
Os06g0182400 Oryza sativa ssp. japonica HOM05D006152 ORTHO05D008137 3.3e-85 319.7 280 58.2
SalBow1G4451 Salvia bowleyana HOM05D001472 ORTHO05D002655 5.7e-85 318.9 278 58.6
C02p13510 Brassica napus HOM05D006152 ORTHO05D008137 1.6e-84 317.4 278 58.6
THA.LOC104811841 Tarenaya hassleriana HOM05D006152 ORTHO05D008137 8.2e-84 315.1 280 58.9
AT5G58200 Arabidopsis thaliana HOM05D006152 ORTHO05D008137 2.4e-83 313.5 281 58.0
BcaB05g22408 Brassica carinata HOM05D006152 ORTHO05D008137 6.9e-83 312.0 281 56.9
AL8G34300 Arabidopsis lyrata HOM05D006152 ORTHO05D008137 1.2e-82 311.2 284 57.0
Nitab4.5_0003856g0050 Nicotiana tabacum HOM05D006152 ORTHO05D008137 1.2e-82 311.2 278 56.1
BraA02t05860Z Brassica rapa HOM05D006152 ORTHO05D008137 2.0e-82 310.5 292 55.8
BolC2t07463H Brassica oleracea HOM05D006152 ORTHO05D008137 5.9e-82 308.9 289 56.4
PGR142G2956 Punica granatum HOM05D006152 ORTHO05D008137 3.8e-81 306.2 284 54.9
ECA234G4022 Erigeron canadensis HOM05D000464 ORTHO05D000408 8.5e-81 305.1 230 65.2
BcaC03g14112 Brassica carinata HOM05D006152 ORTHO05D008137 1.1e-80 304.7 289 55.7
Hma1.2p1_0222F.1_g093210 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 1.1e-80 304.7 242 64.0
SGA_v2.0_scaffold387G50519 Striga asiatica HOM05D006152 ORTHO05D008137 1.1e-80 304.7 329 50.5
SEGI_04227 Sequoiadendron giganteum HOM05D006152 ORTHO05D008137 9.3e-80 301.6 277 57.0
AUR62019760 Chenopodium quinoa HOM05D001472 ORTHO05D002655 7.9e-79 298.5 279 55.9
Cpa.g.sc46.115 Carica papaya HOM05D006152 ORTHO05D008137 3.0e-78 296.6 281 57.3
Duzib168G0440 Durio zibethinus HOM05D006152 ORTHO05D008137 1.9e-77 293.9 275 58.2
SalBow5G3728 Salvia bowleyana HOM05D001472 ORTHO05D002655 3.3e-77 293.1 254 59.8
QL02p092408 Quercus lobata HOM05D006152 ORTHO05D008137 5.7e-77 292.4 229 65.5
AUR62010759 Chenopodium quinoa HOM05D001472 ORTHO05D002655 2.2e-76 290.4 278 55.4
MBI15_g30906_MAGBIO Magnolia biondii HOM05D006152 ORTHO05D008137 1.5e-74 284.3 229 62.4
COL.COLO4_18762 Corchorus olitorius HOM05D006152 ORTHO05D008137 1.3e-73 281.2 230 61.3
MELO3C004453.2 Cucumis melo HOM05D006152 ORTHO05D008137 5.0e-73 279.3 242 57.9
AUR62041375 Chenopodium quinoa HOM05D001472 ORTHO05D002655 3.2e-72 276.6 260 56.5
VMungo1215G1041 Vigna mungo HOM05D006152 ORTHO05D008137 3.6e-71 273.1 241 59.3
CAN.G520.14 Capsicum annuum HOM05D006152 ORTHO05D008137 8.8e-70 268.5 233 58.4
Nitab4.5_0001094g0060 Nicotiana tabacum HOM05D006152 ORTHO05D008137 5.7e-69 265.8 290 50.0
CDE05G0292 Ceratophyllum demersum HOM05D006152 ORTHO05D008137 4.1e-67 259.6 228 57.0
AUR62017200 Chenopodium quinoa HOM05D006152 ORTHO05D008137 4.1e-67 259.6 239 56.5
PGSC0003DMG400003198 Solanum tuberosum HOM05D006152 ORTHO05D008137 9.1e-67 258.5 219 58.9
EL10Ac8g18846 Beta vulgaris HOM05D006152 ORTHO05D008137 2.6e-66 256.9 229 58.1
Psat4g007440 Pisum sativum HOM05D006152 ORTHO05D008137 5.9e-66 255.8 241 56.8
Ah.04g162170 Amaranthus hybridus HOM05D006152 ORTHO05D008137 1.3e-65 254.6 276 50.7
TAR383G0013 Trochodendron aralioides HOM05D006152 ORTHO05D008137 3.8e-65 253.1 154 77.9
Mapoly0124s0018 Marchantia polymorpha HOM05D006152 ORTHO05D008137 3.3e-61 240.0 290 45.5
Dinv42894 Davidia involucrata HOM05D006152 ORTHO05D008137 1.7e-60 237.7 159 67.9
Pp3c26_6540 Physcomitrium patens HOM05D006152 ORTHO05D008137 2.2e-60 237.3 286 46.2
SMO347G0290 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 1.2e-58 231.5 279 46.2
Potri.006G188200 Populus trichocarpa HOM05D006152 ORTHO05D008137 1.6e-58 231.1 181 65.7
AagrBONN_evm.TU.Sc2ySwM_228.5740 Anthoceros agrestis HOM05D006152 ORTHO05D008137 4.5e-58 229.6 290 45.9
MD00G1188400 Malus domestica HOM05D006152 ORTHO05D008137 1.0e-57 228.4 150 72.0
AUR62002687 Chenopodium quinoa HOM05D006152 ORTHO05D008137 2.8e-52 210.3 263 47.1
GSVIVG01001075001 Vitis vinifera HOM05D006152 ORTHO05D008137 3.7e-52 209.9 277 48.4
SMO356G0422 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 6.3e-52 209.1 281 41.6
CARHR032820 Cardamine hirsuta HOM05D006152 ORTHO05D008137 4.1e-51 206.5 275 47.3
Migut.K01256 Erythranthe guttata HOM05D006152 ORTHO05D008137 1.0e-49 201.8 159 62.9
SMO169G0164 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 2.9e-49 200.3 295 38.3
ClCG11G003570 Citrullus lanatus HOM05D006152 ORTHO05D008137 9.4e-48 195.3 189 55.0
Ca_21103_v3 Cicer arietinum L. HOM05D006152 ORTHO05D008137 1.7e-44 184.5 226 48.7
HPP92_017513 Vanilla planifolia HOM05D006152 ORTHO05D008137 7.0e-43 179.1 138 63.8
Cre17.g729650 Chlamydomonas reinhardtii HOM05D006152 ORTHO05D008137 7.2e-40 169.1 244 43.0
FAN28G1911 Fragaria x ananassa HOM05D006152 ORTHO05D008137 4.0e-38 163.3 143 60.1
FvH4_1g01380 Fragaria vesca HOM05D006152 ORTHO05D008137 2.3e-33 147.5 101 70.3
Dinv43207 Davidia involucrata HOM05D006152 ORTHO05D008137 1.6e-31 141.4 91 72.5
AUR62038836 Chenopodium quinoa HOM05D001472 ORTHO05D008137 1.4e-30 138.3 130 56.9
Zm00001eb374780 Zea mays HOM05D006152 ORTHO05D008137 3.7e-28 130.2 89 69.7
TAR383G0486 Trochodendron aralioides HOM05D006152 ORTHO05D008137 5.0e-25 119.8 104 63.5
Oeu028814.1 Olea europaea HOM05D006152 ORTHO05D008137 6.6e-25 119.4 170 41.8
PSO384G1445 Papaver somniferum HOM05D001907 ORTHO05D002387 1.3e-17 95.1 119 47.9
Sc04g0006660 Simmondsia chinensis HOM05D006152 ORTHO05D008137 3.6e-15 87.0 80 53.8
Potri.018G111500 Populus trichocarpa HOM05D006152 ORTHO05D008137 2.3e-14 84.3 89 49.4
GSVIVG01003719001 Vitis vinifera HOM05D006152 ORTHO05D008137 2.0e-13 81.3 48 81.2
PSO384G2885 Papaver somniferum HOM05D001907 ORTHO05D303087 4.9e-12 76.6 56 69.6
SMO356G0211 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 1.9e-11 74.7 68 48.5
PGR142G1207 Punica granatum HOM05D006152 ORTHO05D008137 3.2e-11 73.9 48 70.8
PSO170G4236 Papaver somniferum HOM05D001907 ORTHO05D002387 4.1e-11 73.6 85 54.1
Sc08g0005240 Simmondsia chinensis HOM05D006152 ORTHO05D008137 3.5e-10 70.5 103 43.7
PSO017G6745 Papaver somniferum HOM05D001907 ORTHO05D002387 5.6e-08 63.2 72 54.2
FvH4_1g01360 Fragaria vesca HOM05D006152 ORTHO05D045810 4.0e-06 57.0 36 69.4


User provided reference genes

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