Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6021 Papaver somniferum HOM05D003972 ORTHO05D004609 8.0e-124 447.2 241 100.0
PSO384G2850 Papaver somniferum HOM05D003972 ORTHO05D004609 1.2e-122 443.4 241 98.8
TAR633G1993 Trochodendron aralioides HOM05D003972 ORTHO05D004609 7.3e-85 317.8 246 69.1
Thecc.01G411300 Theobroma cacao HOM05D003972 ORTHO05D004609 9.5e-85 317.4 241 70.5
Atru.chr11.2659 Acer truncatum HOM05D003972 ORTHO05D004609 3.6e-84 315.5 239 70.7
TAR633G2347 Trochodendron aralioides HOM05D003972 ORTHO05D004609 1.1e-83 313.9 246 68.3
Lsat_1_v5_gn_1_107421 Lactuca sativa HOM05D003972 ORTHO05D004609 1.8e-83 313.2 245 68.2
CiPaw.13G004600 Carya illinoinensis HOM05D003972 ORTHO05D004609 8.9e-83 310.8 239 68.2
Haze_03211 Corylus avellana HOM05D000015 ORTHO05D004609 8.9e-83 310.8 274 63.1
Nn2g15387 Nelumbo nucifera HOM05D003972 ORTHO05D004609 3.4e-82 308.9 239 69.0
MD07G1010400 Malus domestica HOM05D003972 ORTHO05D004609 4.4e-82 308.5 248 66.9
Prupe.2G012700 Prunus persica HOM05D003972 ORTHO05D004609 1.7e-81 306.6 245 67.3
ClCG09G004190 Citrullus lanatus HOM05D003972 ORTHO05D004609 3.7e-81 305.4 244 68.9
PGSC0003DMG400006869 Solanum tuberosum HOM05D003972 ORTHO05D004609 3.7e-81 305.4 238 66.0
Nn7g36192 Nelumbo nucifera HOM05D003972 ORTHO05D004609 6.4e-81 304.7 239 68.2
Sopen01g034180 Solanum pennellii HOM05D003972 ORTHO05D004609 1.1e-80 303.9 238 66.0
Hund16627 Selenicereus undatus HOM05D003972 ORTHO05D004609 1.4e-80 303.5 241 67.2
PGR044G2681 Punica granatum HOM05D003972 ORTHO05D004609 1.9e-80 303.1 246 65.4
Manes.10G143400 Manihot esculenta HOM05D003972 ORTHO05D004609 2.4e-80 302.8 245 66.1
Solyc01g087120.3 Solanum lycopersicum HOM05D003972 ORTHO05D004609 3.2e-80 302.4 238 66.0
CSS0031611 Camellia sinensis var. sinensis HOM05D003972 ORTHO05D004609 4.1e-80 302.0 245 66.5
RcHm_v2.0_Chr1g0315911 Rosa chinensis HOM05D003972 ORTHO05D004609 4.1e-80 302.0 246 67.5
Duzib138G0053 Durio zibethinus HOM05D003972 ORTHO05D004609 7.1e-80 301.2 243 67.1
FAN03G0639 Fragaria x ananassa HOM05D003972 ORTHO05D004609 7.1e-80 301.2 247 66.8
MD02G1312800 Malus domestica HOM05D003972 ORTHO05D004609 7.1e-80 301.2 248 65.3
HanXRQChr01g0016231 Helianthus annuus HOM05D003972 ORTHO05D004609 9.2e-80 300.8 246 62.6
Gohir.A12G094100 Gossypium hirsutum HOM05D003972 ORTHO05D004609 1.2e-79 300.4 243 67.5
FAN06G4274 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.6e-79 300.1 242 67.8
FAN10G2592 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.6e-79 300.1 242 67.8
TWI09G1021 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 2.1e-79 299.7 246 65.4
Aqoxy2G00123 Aquilegia oxysepala HOM05D003972 ORTHO05D004609 2.7e-79 299.3 249 65.5
Gohir.D12G096966 Gossypium hirsutum HOM05D003972 ORTHO05D004609 3.5e-79 298.9 243 67.9
Gorai.008G105300 Gossypium raimondii HOM05D003972 ORTHO05D004609 3.5e-79 298.9 243 67.9
FvH4_7g01010 Fragaria vesca HOM05D003972 ORTHO05D004609 4.6e-79 298.5 242 67.4
TWI73G1179 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 7.8e-79 297.7 246 64.6
FAN01G2341 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.0e-78 297.4 247 66.0
Nitab4.5_0000634g0150 Nicotiana tabacum HOM05D003972 ORTHO05D004609 1.7e-78 296.6 238 66.0
MBI01_g18885_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 3.9e-78 295.4 246 65.0
HanXRQChr16g0524521 Helianthus annuus HOM05D003972 ORTHO05D004609 5.1e-78 295.0 244 64.3
EL10Ac3g05626 Beta vulgaris HOM05D003972 ORTHO05D004609 8.6e-78 294.3 240 64.2
CAN.G1560.6 Capsicum annuum HOM05D003972 ORTHO05D004609 8.6e-78 294.3 236 65.7
MBI04_g36067_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 8.6e-78 294.3 248 62.5
vmacro13664 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 8.6e-78 294.3 247 64.0
Duzib268G1708 Durio zibethinus HOM05D003972 ORTHO05D004609 1.5e-77 293.5 243 65.8
HanXRQChr17g0562951 Helianthus annuus HOM05D003972 ORTHO05D004609 7.3e-77 291.2 246 63.8
Peaxi162Scf00428g00211 Petunia axillaris HOM05D003972 ORTHO05D004609 9.6e-77 290.8 238 66.0
Rhsim07G0055300 Rhododendron simsii HOM05D003972 ORTHO05D004609 9.6e-77 290.8 243 65.0
Actinidia20668 Actinidia chinensis HOM05D003972 ORTHO05D004609 1.2e-76 290.4 247 63.2
ECA248G3800 Erigeron canadensis HOM05D003972 ORTHO05D004609 1.6e-76 290.0 238 65.1
PGR042G2196 Punica granatum HOM05D003972 ORTHO05D004609 2.1e-76 289.7 246 64.2
Lj7A570T56 Lonicera japonica HOM05D003972 ORTHO05D004609 4.7e-76 288.5 262 61.5
GSVIVG01032087001 Vitis vinifera HOM05D003972 ORTHO05D004609 4.7e-76 288.5 246 63.4
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 8.1e-76 287.7 231 66.7
Sed0017110 Sechium edule HOM05D003972 ORTHO05D004609 8.1e-76 287.7 244 65.2
MELO3C023548.2 Cucumis melo HOM05D003972 ORTHO05D004609 1.1e-75 287.3 244 62.7
Sed0003633 Sechium edule HOM05D003972 ORTHO05D004609 1.1e-75 287.3 237 64.6
QL04p006659 Quercus lobata HOM05D003972 ORTHO05D004609 4.0e-75 285.4 199 74.9
CsaV3_7G031080 Cucumis sativus L. HOM05D003972 ORTHO05D004609 1.2e-74 283.9 246 61.8
Ciclev10032620m.g Citrus clementina HOM05D003972 ORTHO05D004609 3.4e-74 282.3 237 63.7
Nitab4.5_0002179g0040 Nicotiana tabacum HOM05D003972 ORTHO05D004609 5.8e-74 281.6 273 57.5
Glyma.15G273900 Glycine max HOM05D003972 ORTHO05D004609 7.6e-74 281.2 243 63.0
MSTRG.5022 Avicennia marina HOM05D003972 ORTHO05D004609 1.7e-73 280.0 247 64.0
MSTRG.28071 Avicennia marina HOM05D003972 ORTHO05D004609 2.2e-73 279.6 242 62.8
CANSAT80G0274 Cannabis sativa HOM05D003972 ORTHO05D004609 2.2e-73 279.6 247 61.5
Migut.N01593 Erythranthe guttata HOM05D003972 ORTHO05D004609 2.2e-73 279.6 247 62.8
Oeu047573.1 Olea europaea HOM05D003972 ORTHO05D004609 2.2e-73 279.6 247 62.3
CDE05G0778 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 6.4e-73 278.1 247 57.9
AUR62027419 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.1e-72 277.3 241 61.8
Glyma.08G155200 Glycine max HOM05D003972 ORTHO05D004609 1.4e-72 276.9 243 62.1
COL.COLO4_23932 Corchorus olitorius HOM05D003972 ORTHO05D004609 1.9e-72 276.6 271 56.8
Sc11g0009210 Simmondsia chinensis HOM05D003972 ORTHO05D004609 1.9e-72 276.6 187 74.3
SalBow6G4991 Salvia bowleyana HOM05D003972 ORTHO05D004609 7.1e-72 274.6 238 63.4
Hund14179 Selenicereus undatus HOM05D003972 ORTHO05D004609 7.1e-72 274.6 242 60.7
Lsat_1_v5_gn_1_107400 Lactuca sativa HOM05D003972 ORTHO05D004609 9.3e-72 274.2 247 62.8
Medtr3g028730 Medicago truncatula HOM05D003972 ORTHO05D004609 1.2e-71 273.9 244 61.1
AUR62009382 Chenopodium quinoa HOM05D003972 ORTHO05D004609 4.6e-71 271.9 238 60.9
HPP92_003787 Vanilla planifolia HOM05D003972 ORTHO05D004609 1.3e-70 270.4 246 56.5
Ca_14380_v3 Cicer arietinum L. HOM05D003972 ORTHO05D004609 1.7e-70 270.0 244 59.4
CDE05G2400 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 8.7e-70 267.7 245 56.3
SalBow8G4898 Salvia bowleyana HOM05D003972 ORTHO05D004609 8.7e-70 267.7 234 62.8
TPR.G12160 Trifolium pratense HOM05D003972 ORTHO05D004609 1.1e-69 267.3 244 57.4
VMungo1080G1024 Vigna mungo HOM05D003972 ORTHO05D004609 1.9e-69 266.5 243 59.7
Lalb_Chr11g0073961 Lupinus albus HOM05D003972 ORTHO05D004609 2.5e-69 266.2 244 61.9
Oeu014581.1 Olea europaea HOM05D003972 ORTHO05D004609 4.3e-69 265.4 255 57.3
Sabra09G0045500 Salix brachista HOM05D003972 ORTHO05D004609 4.3e-69 265.4 243 55.1
arahy.Tifrunner.gnm1.ann1.9I3PL7 Arachis hypogaea HOM05D003972 ORTHO05D004609 5.6e-69 265.0 243 60.9
arahy.Tifrunner.gnm1.ann1.XF35YI Arachis hypogaea HOM05D003972 ORTHO05D004609 5.6e-69 265.0 243 60.9
Potri.009G061600 Populus trichocarpa HOM05D003972 ORTHO05D004609 5.6e-69 265.0 243 55.6
Psat5g207400 Pisum sativum HOM05D003972 ORTHO05D004609 7.3e-69 264.6 244 58.6
CARHR199980 Cardamine hirsuta HOM05D003972 ORTHO05D004609 1.6e-68 263.5 238 58.0
ClCG10G012410 Citrullus lanatus HOM05D003972 ORTHO05D004609 2.8e-68 262.7 267 56.2
Ah.06g182390 Amaranthus hybridus HOM05D003972 ORTHO05D004609 4.8e-68 261.9 257 57.2
Lj4g0010030 Lotus japonicus HOM05D003972 ORTHO05D004609 1.1e-67 260.8 238 60.5
A10p24800 Brassica napus HOM05D003972 ORTHO05D004609 1.4e-67 260.4 240 57.5
Phvul.005G021000 Phaseolus vulgaris HOM05D003972 ORTHO05D004609 1.4e-67 260.4 244 57.4
BraA10t44544Z Brassica rapa HOM05D003972 ORTHO05D004609 1.8e-67 260.0 240 57.5
BolC9t59206H Brassica oleracea HOM05D003972 ORTHO05D004609 3.1e-67 259.2 240 57.1
C09p63620 Brassica napus HOM05D003972 ORTHO05D004609 4.0e-67 258.8 240 57.5
Oeu006575.2 Olea europaea HOM05D003972 ORTHO05D004609 4.0e-67 258.8 241 59.3
Lalb_Chr08g0232821 Lupinus albus HOM05D003972 ORTHO05D004609 5.3e-67 258.5 223 63.2
AUR62027358 Chenopodium quinoa HOM05D003972 ORTHO05D004609 9.0e-67 257.7 231 59.7
DCAR_006337 Daucus carota HOM05D003972 ORTHO05D004609 1.2e-66 257.3 236 62.3
BcaC04g19115 Brassica carinata HOM05D003972 ORTHO05D004609 2.0e-66 256.5 240 56.7
Sp6g30570 Schrenkiella parvula HOM05D003972 ORTHO05D004609 2.0e-66 256.5 240 56.7
BraA03t09936Z Brassica rapa HOM05D003972 ORTHO05D004609 2.6e-66 256.1 240 56.7
SalBow5G3531 Salvia bowleyana HOM05D003972 ORTHO05D004609 3.4e-66 255.8 246 58.9
A03p05990 Brassica napus HOM05D003972 ORTHO05D004609 4.4e-66 255.4 240 56.7
BcaNung01885 Brassica carinata HOM05D003972 ORTHO05D004609 1.7e-65 253.4 238 57.6
Carub.0006s1161 Capsella rubella HOM05D003972 ORTHO05D004609 1.7e-65 253.4 240 55.4
unitig_8.g3624 Utricularia gibba HOM05D003972 ORTHO05D004609 1.7e-65 253.4 201 64.7
ATR0605G205 Amborella trichopoda HOM05D003972 ORTHO05D004609 2.9e-65 252.7 246 56.1
Thhalv10014516m.g Eutrema salsugineum HOM05D003972 ORTHO05D004609 2.9e-65 252.7 240 56.2
BcaNung01153 Brassica carinata HOM05D003972 ORTHO05D004609 3.8e-65 252.3 238 56.7
BolC2t06557H Brassica oleracea HOM05D003972 ORTHO05D004609 3.8e-65 252.3 238 56.7
A02p01940 Brassica napus HOM05D003972 ORTHO05D004609 6.4e-65 251.5 238 56.3
BraA02t05167Z Brassica rapa HOM05D003972 ORTHO05D004609 6.4e-65 251.5 238 56.3
RcHm_v2.0_Chr7g0187561 Rosa chinensis HOM05D003972 ORTHO05D004609 6.4e-65 251.5 250 56.8
C03p07030 Brassica napus HOM05D003972 ORTHO05D004609 8.4e-65 251.1 238 57.6
BolC3t13201H Brassica oleracea HOM05D003972 ORTHO05D004609 8.4e-65 251.1 238 57.6
Aa31LG3G15250 Aethionema arabicum HOM05D003972 ORTHO05D004609 1.4e-64 250.4 256 52.7
Ah.06g182400 Amaranthus hybridus HOM05D003972 ORTHO05D004609 4.2e-64 248.8 270 54.4
Os06g0646500 Oryza sativa ssp. japonica HOM05D003972 ORTHO05D004609 4.2e-64 248.8 207 60.4
AL6G24070 Arabidopsis lyrata HOM05D003972 ORTHO05D004609 5.4e-64 248.4 240 55.0
THA.LOC104819071 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 7.1e-64 248.1 239 56.1
AT5G13450 Arabidopsis thaliana HOM05D003972 ORTHO05D004609 2.1e-63 246.5 236 55.5
Aa31LG5G18610 Aethionema arabicum HOM05D003972 ORTHO05D004609 3.5e-63 245.7 260 51.9
Lj9A631T54 Lonicera japonica HOM05D003972 ORTHO05D004609 1.0e-62 244.2 249 57.0
FvH4_5g10590 Fragaria vesca HOM05D003972 ORTHO05D004609 2.5e-61 239.6 251 54.6
FAN13G3241 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.6e-60 235.7 251 53.8
FAN18G0724 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.6e-60 235.7 245 54.3
THA.LOC104809854 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 4.8e-60 235.3 241 50.6
FAN04G1554 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.8e-59 233.4 251 53.4
BcaB01g05358 Brassica carinata HOM05D003972 ORTHO05D004609 2.4e-59 233.0 244 54.1
Zm00001eb188600 Zea mays HOM05D003972 ORTHO05D004609 4.5e-58 228.8 238 53.4
SGA_v2.0_scaffold24G10676 Striga asiatica HOM05D003972 ORTHO05D004609 1.7e-57 226.9 231 58.0
vmacro21185 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 3.8e-57 225.7 345 42.0
Sed0014658 Sechium edule HOM05D003972 ORTHO05D004609 3.2e-56 222.6 249 55.0
SHI04087 Sapria himalayana HOM05D003972 ORTHO05D004609 1.8e-54 216.9 209 52.2
Cc02_g27920 Coffea canephora HOM05D003972 ORTHO05D004609 1.3e-52 210.7 195 57.9
Dinv43448 Davidia involucrata HOM05D003972 ORTHO05D004609 6.2e-52 208.4 204 58.3
SGA_v2.0_scaffold5G02971 Striga asiatica HOM05D003972 ORTHO05D004609 6.2e-52 208.4 358 40.5
SEGI_23171 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 1.1e-51 207.6 247 47.0
Cpa.g.sc245.17 Carica papaya HOM05D003972 ORTHO05D004609 3.1e-51 206.1 237 51.1
Rhsim01G0129500 Rhododendron simsii HOM05D003972 ORTHO05D004609 2.0e-50 203.4 291 44.3
SalBow5G0402 Salvia bowleyana HOM05D003972 ORTHO05D004609 1.4e-48 197.2 236 50.8
SEGI_22482 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 1.6e-44 183.7 195 51.3
Haze_18530 Corylus avellana HOM05D003972 ORTHO05D004609 2.2e-41 173.3 171 56.1
MELO3C030924.2 Cucumis melo HOM05D003972 ORTHO05D004609 3.2e-40 169.5 139 66.2
Haze_20480 Corylus avellana HOM05D003972 ORTHO05D004609 4.2e-40 169.1 117 71.8
QL04p007936 Quercus lobata HOM05D003972 ORTHO05D004609 1.2e-39 167.5 160 60.0
BcaB06g27143 Brassica carinata HOM05D003972 ORTHO05D004609 1.1e-37 161.0 141 57.4
Pp3c21_13430 Physcomitrium patens HOM05D003972 ORTHO05D004609 1.5e-37 160.6 213 40.4
Pp3c21_15430 Physcomitrium patens HOM05D003972 ORTHO05D004609 1.5e-37 160.6 223 39.5
CsaV3_3G032180 Cucumis sativus L. HOM05D003972 ORTHO05D004609 1.4e-35 154.1 96 78.1
Mapoly0003s0068 Marchantia polymorpha HOM05D003972 ORTHO05D004609 4.1e-35 152.5 231 39.8
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 2.6e-34 149.8 105 66.7
CBR_g17944 Chara braunii HOM05D003972 ORTHO05D004609 4.5e-34 149.1 186 43.0
Actinidia21554 Actinidia chinensis HOM05D003972 ORTHO05D004609 6.5e-33 145.2 219 43.8
Eucgr.I01987 Eucalyptus grandis HOM05D003972 ORTHO05D004609 3.3e-29 132.9 143 54.5
Pp3c11_16260 Physcomitrium patens HOM05D003972 ORTHO05D004609 7.4e-29 131.7 192 35.9
SMO228G0064 Selaginella moellendorffii HOM05D003972 ORTHO05D004609 2.2e-25 120.2 188 33.0
MCO05G116 Micromonas commoda HOM05D003972 ORTHO05D004609 2.5e-24 116.7 184 36.4
AagrBONN_evm.TU.Sc2ySwM_344.1217 Anthoceros agrestis HOM05D003972 ORTHO05D004609 7.2e-24 115.2 156 41.7
GSVIVG01024256001 Vitis vinifera HOM05D003972 ORTHO05D004609 2.1e-23 113.6 82 70.7
Cpa.g.c41216 Carica papaya HOM05D003972 ORTHO05D004609 2.0e-21 107.1 65 78.5
Sc10g0000050 Simmondsia chinensis HOM05D003972 ORTHO05D004609 9.7e-21 104.8 66 75.8
CsaV3_3G032190 Cucumis sativus L. HOM05D003972 ORTHO05D004609 5.3e-19 99.0 116 49.1
Manes.07G005701 Manihot esculenta HOM05D003972 ORTHO05D004609 7.0e-19 98.6 102 54.9
PRCOL_00004246 Prasinoderma coloniale HOM05D003972 ORTHO05D004609 2.6e-18 96.7 192 34.4
Cre16.g680000 Chlamydomonas reinhardtii HOM05D003972 ORTHO05D004609 1.7e-17 94.0 203 33.0
Rhsim02G0189700 Rhododendron simsii HOM05D003972 ORTHO05D004609 3.2e-16 89.7 74 60.8
Rhsim01G0081100 Rhododendron simsii HOM05D003972 ORTHO05D004609 9.4e-16 88.2 70 65.7
Rhsim01G0052900 Rhododendron simsii HOM05D003972 ORTHO05D004609 2.7e-15 86.7 70 62.9
Rhsim02G0048300 Rhododendron simsii HOM05D003972 ORTHO05D004609 2.7e-15 86.7 70 62.9
BcaB01g02352 Brassica carinata HOM05D003895 ORTHO05D004723 6.1e-15 85.5 67 59.7
BcaB01g00975 Brassica carinata HOM05D003895 ORTHO05D004723 5.2e-14 82.4 67 58.2
MELO3C030665.2 Cucumis melo HOM05D003972 ORTHO05D004609 2.0e-13 80.5 64 62.5
MCO11G452 Micromonas commoda HOM05D003160 ORTHO05D005967 1.1e-11 74.7 190 26.8
BcaB05g22068 Brassica carinata HOM05D003895 ORTHO05D004723 3.1e-11 73.2 72 55.6
Lsat_1_v5_gn_5_111580 Lactuca sativa HOM05D000217 ORTHO05D000121 2.3e-06 57.0 71 47.9
PRCOL_00001524 Prasinoderma coloniale HOM05D003160 ORTHO05D005967 3.0e-06 56.6 165 24.8
Pp3c23_11680 Physcomitrium patens HOM05D003160 ORTHO05D005967 8.8e-06 55.1 193 19.7


User provided reference genes

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