Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 5.2e-119 431.0 211 100.0
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 4.7e-112 407.9 211 95.7
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 8.0e-96 354.0 212 82.1
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 3.1e-95 352.1 212 82.5
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 5.2e-95 351.3 212 79.2
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 4.4e-94 348.2 191 85.9
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 1.3e-93 346.7 212 81.1
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 2.4e-92 342.4 212 76.4
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 2.1e-91 339.3 209 78.0
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 3.5e-91 338.6 212 77.4
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 1.3e-90 336.7 212 76.4
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 1.7e-90 336.3 212 75.5
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 1.9e-89 332.8 212 75.9
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 2.8e-88 328.9 205 75.6
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 3.6e-88 328.6 205 75.1
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 3.1e-87 325.5 209 75.6
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 4.0e-87 325.1 199 78.9
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 5.8e-86 321.2 227 68.7
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 7.6e-86 320.9 212 75.0
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 3.7e-85 318.5 209 74.2
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 3.2e-84 315.5 211 70.1
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 1.2e-83 313.5 209 70.8
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 2.1e-83 312.8 209 70.8
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 2.1e-83 312.8 209 71.8
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 6.0e-83 311.2 195 74.9
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 1.0e-82 310.5 208 72.1
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 2.3e-82 309.3 205 73.2
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 6.6e-82 307.8 206 70.9
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 8.6e-82 307.4 212 68.4
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 1.5e-81 306.6 209 72.7
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.9e-81 306.2 209 72.2
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.9e-81 306.2 209 72.2
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 1.9e-81 306.2 209 72.2
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 1.9e-81 306.2 209 72.7
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 3.3e-81 305.4 212 68.9
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 3.3e-81 305.4 211 71.1
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.3e-81 304.3 213 70.9
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.3e-81 304.3 213 70.9
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 9.6e-81 303.9 208 72.1
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.1e-80 302.8 213 70.4
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 3.6e-80 302.0 213 70.4
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 8.1e-80 300.8 213 69.0
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 3.1e-79 298.9 213 69.5
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.0e-79 298.5 208 70.2
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 4.0e-79 298.5 191 73.8
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 5.2e-79 298.1 217 66.4
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 6.8e-79 297.7 211 69.7
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 8.9e-79 297.4 208 69.7
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 8.9e-79 297.4 205 68.3
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 1.3e-77 293.5 209 67.9
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 1.7e-77 293.1 195 70.8
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 2.2e-77 292.7 213 66.2
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 2.9e-77 292.4 209 67.9
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 2.9e-77 292.4 209 68.4
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 1.1e-76 290.4 195 69.7
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 1.1e-76 290.4 212 67.0
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 1.4e-76 290.0 209 67.9
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 1.4e-76 290.0 205 67.3
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 3.2e-76 288.9 213 66.7
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 3.2e-76 288.9 205 69.3
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 3.2e-76 288.9 213 67.1
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 3.2e-76 288.9 209 67.0
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 4.2e-76 288.5 213 66.7
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 4.2e-76 288.5 209 67.9
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 5.4e-76 288.1 209 65.6
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 9.3e-76 287.3 205 67.8
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 9.3e-76 287.3 212 67.0
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 9.3e-76 287.3 213 67.6
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 1.2e-75 287.0 205 67.8
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 1.6e-75 286.6 213 64.8
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 4.6e-75 285.0 205 67.3
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 6.0e-75 284.6 205 67.8
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 6.0e-75 284.6 208 63.9
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 1.0e-74 283.9 210 65.7
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 1.3e-74 283.5 212 66.5
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 1.7e-74 283.1 212 65.6
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 2.3e-74 282.7 212 65.6
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 3.9e-74 282.0 213 66.7
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 6.6e-74 281.2 195 68.2
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 6.6e-74 281.2 212 65.1
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 1.9e-73 279.6 212 65.1
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 2.5e-73 279.3 212 66.0
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 4.3e-73 278.5 212 64.6
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 7.3e-73 277.7 212 64.6
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 7.3e-73 277.7 212 64.2
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 1.6e-72 276.6 212 64.2
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 4.8e-72 275.0 216 62.5
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 6.2e-72 274.6 215 63.3
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 8.1e-72 274.2 195 66.2
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 1.1e-71 273.9 212 64.2
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 4.0e-71 271.9 195 66.2
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 2.0e-70 269.6 214 62.1
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 4.4e-70 268.5 193 65.3
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 5.8e-70 268.1 200 64.0
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 1.9e-68 263.1 190 68.9
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 1.9e-68 263.1 196 66.3
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 1.9e-68 263.1 196 66.3
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 1.9e-68 263.1 196 66.3
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 2.4e-68 262.7 193 67.4
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 3.2e-68 262.3 181 69.1
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 4.2e-68 261.9 196 65.8
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 3.3e-65 252.3 237 56.5
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.1e-63 247.3 185 62.7
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 6.9e-63 244.6 172 65.1
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 3.4e-62 242.3 155 72.3
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 4.5e-62 241.9 193 63.2
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 2.2e-61 239.6 196 61.7
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 4.9e-61 238.4 213 60.1
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 9.6e-57 224.2 167 58.1
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 3.4e-54 215.7 144 68.8
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 6.0e-51 204.9 206 51.0
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 3.3e-49 199.1 212 53.8
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 6.7e-42 174.9 113 71.7
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 2.2e-40 169.9 135 64.4
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 1.1e-36 157.5 186 41.4
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 8.2e-32 141.4 79 78.5
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 6.9e-31 138.3 171 43.9
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 1.0e-29 134.4 171 42.7
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 8.5e-29 131.3 110 52.7
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 3.8e-21 105.9 63 69.8
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 2.7e-19 99.8 105 46.7
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 1.0e-18 97.8 178 35.4
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 5.2e-18 95.5 88 60.2
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 7.0e-15 85.1 79 51.9
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 1.3e-13 80.9 46 69.6
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 2.9e-13 79.7 60 60.0
BolC1t05204H Brassica oleracea HOM05D005838 ORTHO05D007177 2.1e-11 73.6 56 58.9
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 6.8e-10 68.6 68 52.9
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 6.8e-10 68.6 83 48.2
Dinv18752 Davidia involucrata HOM05D036176 ORTHO05D007177 7.5e-09 65.1 51 62.7
Actinidia29229 Actinidia chinensis HOM05D005838 ORTHO05D007177 1.1e-07 61.2 40 70.0
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus HOM05D005838 ORTHO05D041122 1.4e-07 60.8 151 32.5
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 2.4e-07 60.1 61 52.5


User provided reference genes

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