Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5948 Papaver somniferum HOM05D007489 ORTHO05D008037 0.0e+00 2063.9 1059 100.0
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 3.4e-142 510.4 308 87.7
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 7.5e-142 509.2 308 87.3
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 1.4e-87 328.9 299 64.2
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 1.7e-85 322.0 299 64.2
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 3.2e-23 115.2 297 35.4
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 3.9e-21 108.2 295 34.6
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 4.6e-14 84.7 386 24.4
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 1.5e-12 79.7 353 28.3
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 3.3e-12 78.6 329 27.4
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 4.3e-12 78.2 245 31.0
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 4.3e-12 78.2 325 25.2
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.2e-11 76.6 273 33.3
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 2.3e-10 72.4 255 31.0
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 5.2e-10 71.2 306 28.8
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 6.8e-10 70.9 261 31.4
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 1.2e-09 70.1 299 26.4
Haze_13709 Corylus avellana HOM05D005579 ORTHO05D006775 1.5e-09 69.7 162 34.0
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 7.6e-09 67.4 254 31.1
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 9.9e-09 67.0 286 28.0
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 9.9e-09 67.0 189 30.2
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.7e-08 66.2 242 27.3
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 2.9e-08 65.5 267 26.6
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.9e-08 65.5 269 26.0
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 3.7e-08 65.1 244 27.5
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.9e-08 64.7 300 25.7
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 4.9e-08 64.7 279 26.2
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 8.3e-08 63.9 173 31.8
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 4.1e-07 61.6 140 32.9
FAN10G3029 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.2e-06 60.1 82 39.0
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 1.2e-06 60.1 228 26.8
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 2.1e-06 59.3 182 33.0
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 2.7e-06 58.9 220 25.9
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 3.5e-06 58.5 254 25.2
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 3.5e-06 58.5 371 22.6
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 6.0e-06 57.8 83 41.0
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 6.0e-06 57.8 197 29.9


User provided reference genes

Program Settings