Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5943 Papaver somniferum HOM05D001158 ORTHO05D000964 9.9e-64 246.5 116 100.0
PSO339G3661 Papaver somniferum HOM05D001158 ORTHO05D000964 1.7e-10 69.7 78 48.7
PSO384G1026 Papaver somniferum HOM05D001158 ORTHO05D000964 2.2e-10 69.3 78 48.7
PSO339G3324 Papaver somniferum HOM05D001158 ORTHO05D000964 1.8e-09 66.2 80 47.5
Haze_17075 Corylus avellana HOM05D001158 ORTHO05D000964 3.5e-08 62.0 63 47.6
Sed0001831 Sechium edule HOM05D001158 ORTHO05D000964 3.5e-08 62.0 63 44.4
Cfa001467 Carpinus fangiana HOM05D001158 ORTHO05D000964 5.9e-08 61.2 63 46.0
CiPaw.02G184700 Carya illinoinensis HOM05D001158 ORTHO05D000964 5.9e-08 61.2 67 44.8
PSO384G0672 Papaver somniferum HOM05D001158 ORTHO05D000964 1.0e-07 60.5 29 96.6
Thecc.10G040600 Theobroma cacao HOM05D001158 ORTHO05D000964 1.3e-07 60.1 63 44.4
Duzib114G0179 Durio zibethinus HOM05D001158 ORTHO05D000964 2.3e-07 59.3 63 47.6
CsaV3_5G026720 Cucumis sativus L. HOM05D001158 ORTHO05D000964 2.9e-07 58.9 63 46.0
Actinidia02942 Actinidia chinensis HOM05D000370 ORTHO05D001366 3.8e-07 58.5 60 46.7
CiPaw.01G288200 Carya illinoinensis HOM05D001158 ORTHO05D000964 3.8e-07 58.5 67 44.8
FvH4_7g22610 Fragaria vesca HOM05D001158 ORTHO05D000964 3.8e-07 58.5 61 49.2
FAN01G1962 Fragaria x ananassa HOM05D001158 ORTHO05D000964 3.8e-07 58.5 61 49.2
FAN01G3010 Fragaria x ananassa HOM05D001158 ORTHO05D000964 3.8e-07 58.5 61 49.2
FAN03G0977 Fragaria x ananassa HOM05D001158 ORTHO05D000964 3.8e-07 58.5 61 49.2
FAN06G3401 Fragaria x ananassa HOM05D001158 ORTHO05D000964 3.8e-07 58.5 61 49.2
Oeu048243.1 Olea europaea HOM05D007042 ORTHO05D008441 3.8e-07 58.5 65 44.6
PGR044G0934 Punica granatum HOM05D001158 ORTHO05D000964 5.0e-07 58.2 60 43.3
GSVIVG01016533001 Vitis vinifera HOM05D001158 ORTHO05D000964 5.0e-07 58.2 65 46.2
THA.LOC104824277 Tarenaya hassleriana HOM05D001158 ORTHO05D000964 6.6e-07 57.8 65 43.1
Prupe.2G236500 Prunus persica HOM05D001158 ORTHO05D000964 8.6e-07 57.4 62 48.4
Dinv26024 Davidia involucrata HOM05D001158 ORTHO05D000964 1.5e-06 56.6 65 44.6
FAN03G2312 Fragaria x ananassa HOM05D001158 ORTHO05D000964 1.5e-06 56.6 61 47.5
Manes.07G116900 Manihot esculenta HOM05D001158 ORTHO05D000964 1.5e-06 56.6 65 46.2
Aa31LG10G10510 Aethionema arabicum HOM05D001158 ORTHO05D000964 1.9e-06 56.2 66 40.9
BcaC02g09760 Brassica carinata HOM05D001158 ORTHO05D000964 1.9e-06 56.2 61 42.6
A04p04460 Brassica napus HOM05D001158 ORTHO05D000964 1.9e-06 56.2 61 42.6
C04p36880 Brassica napus HOM05D001158 ORTHO05D000964 1.9e-06 56.2 61 42.6
BolC4t25254H Brassica oleracea HOM05D001158 ORTHO05D000964 1.9e-06 56.2 61 42.6
BraA04t16157Z Brassica rapa HOM05D001158 ORTHO05D000964 1.9e-06 56.2 61 42.6
Lalb_Chr17g0346211 Lupinus albus HOM05D001158 ORTHO05D000964 1.9e-06 56.2 63 44.4
MELO3C021623.2 Cucumis melo HOM05D001158 ORTHO05D000964 2.5e-06 55.8 63 42.9
RhsimUnG0042000 Rhododendron simsii HOM05D001158 ORTHO05D000964 3.3e-06 55.5 69 46.4
RcHm_v2.0_Chr1g0367731 Rosa chinensis HOM05D001158 ORTHO05D000964 3.3e-06 55.5 61 45.9
FAN10G3581 Fragaria x ananassa HOM05D001158 ORTHO05D000964 4.2e-06 55.1 70 42.9
CARHR165490 Cardamine hirsuta HOM05D001158 ORTHO05D000964 5.5e-06 54.7 61 39.3
DCAR_011712 Daucus carota HOM05D001158 ORTHO05D000964 5.5e-06 54.7 65 47.7
BolC8t50688H Brassica oleracea HOM05D001158 ORTHO05D000964 7.2e-06 54.3 62 43.5
ClCG09G019700 Citrullus lanatus HOM05D001158 ORTHO05D000964 9.5e-06 53.9 60 41.7
Thhalv10010786m.g Eutrema salsugineum HOM05D001158 ORTHO05D000964 9.5e-06 53.9 61 41.0
vmacro07177 Vaccinium macrocarpon HOM05D001158 ORTHO05D000964 9.5e-06 53.9 67 43.3


User provided reference genes

Program Settings