Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 4.2e-66 254.6 132 100.0
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 3.7e-14 82.0 109 44.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 3.1e-13 79.0 109 43.1
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 5.9e-12 74.7 108 39.8
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.0e-11 73.9 108 40.7
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 1.7e-11 73.2 85 44.7
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 2.2e-11 72.8 85 44.7
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 8.5e-11 70.9 108 38.9
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 8.5e-11 70.9 108 39.8
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 8.5e-11 70.9 105 40.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.1e-10 70.5 105 40.0
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 1.1e-10 70.5 85 43.5
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 1.9e-10 69.7 85 43.5
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 3.2e-10 68.9 110 38.2
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 3.2e-10 68.9 105 41.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 4.2e-10 68.6 85 43.5
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 4.2e-10 68.6 85 43.5
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 4.2e-10 68.6 108 38.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 4.2e-10 68.6 85 43.5
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 5.5e-10 68.2 108 37.0
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 9.4e-10 67.4 85 42.4
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 9.4e-10 67.4 108 38.0
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 9.4e-10 67.4 76 43.4
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 9.4e-10 67.4 85 42.4
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 9.4e-10 67.4 85 42.4
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 9.4e-10 67.4 85 42.4
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 1.2e-09 67.0 108 38.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 1.2e-09 67.0 85 43.5
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 1.2e-09 67.0 108 38.0
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 1.2e-09 67.0 108 38.0
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 1.2e-09 67.0 85 42.4
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.2e-09 67.0 76 42.1
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.1e-09 66.2 108 37.0
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 2.7e-09 65.9 76 40.8
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.7e-09 65.9 78 39.7
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 2.7e-09 65.9 75 44.0
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 2.7e-09 65.9 85 41.2
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 2.7e-09 65.9 85 38.8
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 3.6e-09 65.5 85 41.2
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 3.6e-09 65.5 108 36.1
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 3.6e-09 65.5 108 36.1
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 3.6e-09 65.5 108 36.1
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 3.6e-09 65.5 115 34.8
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.6e-09 65.5 85 41.2
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 4.7e-09 65.1 85 42.4
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 4.7e-09 65.1 78 39.7
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 4.7e-09 65.1 108 38.0
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 6.1e-09 64.7 110 36.4
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 6.1e-09 64.7 110 36.4
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 6.1e-09 64.7 110 36.4
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 6.1e-09 64.7 85 41.2
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 8.0e-09 64.3 76 40.8
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 8.0e-09 64.3 76 40.8
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.0e-08 63.9 105 36.2
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 1.0e-08 63.9 61 49.2
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.4e-08 63.5 77 44.2
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 1.4e-08 63.5 108 36.1
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.4e-08 63.5 85 41.2
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.8e-08 63.2 82 41.5
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 1.8e-08 63.2 85 40.0
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 1.8e-08 63.2 85 40.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 2.3e-08 62.8 108 36.1
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 2.3e-08 62.8 108 36.1
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.3e-08 62.8 108 37.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.3e-08 62.8 108 37.0
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 2.3e-08 62.8 85 40.0
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 3.0e-08 62.4 85 40.0
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 3.0e-08 62.4 77 44.2
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 3.0e-08 62.4 85 42.4
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 4.0e-08 62.0 74 44.6
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 4.0e-08 62.0 85 38.8
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 4.0e-08 62.0 82 39.0
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 6.7e-08 61.2 85 40.0
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 6.7e-08 61.2 82 40.2
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 6.7e-08 61.2 100 38.0
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 6.7e-08 61.2 108 34.3
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 6.7e-08 61.2 85 38.8
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 8.8e-08 60.8 82 37.8
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.8e-08 60.8 72 41.7
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.2e-07 60.5 82 41.5
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 1.2e-07 60.5 82 39.0
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.5e-07 60.1 85 38.8
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.5e-07 60.1 85 38.8
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.5e-07 60.1 85 38.8
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 2.0e-07 59.7 85 38.8
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 2.0e-07 59.7 82 39.0
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.0e-07 59.7 82 37.8
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.6e-07 59.3 78 37.2
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 2.6e-07 59.3 85 38.8
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 4.4e-07 58.5 82 37.8
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 5.7e-07 58.2 78 37.2
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 5.7e-07 58.2 87 39.1
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 9.7e-07 57.4 76 38.2
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 9.7e-07 57.4 88 34.1
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.3e-06 57.0 84 36.9
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 1.3e-06 57.0 78 35.9
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.3e-06 57.0 78 35.9
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.3e-06 57.0 78 35.9
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.3e-06 57.0 85 36.5
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.7e-06 56.6 96 36.5
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 2.2e-06 56.2 64 46.9
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.2e-06 56.2 78 35.9
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 2.8e-06 55.8 77 39.0
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.2e-06 54.3 68 41.2


User provided reference genes

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