Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 4.4e-84 314.7 173 100.0
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 6.0e-65 251.1 170 87.1
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 9.1e-29 131.0 170 50.6
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 8.5e-27 124.4 168 50.0
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.1e-25 119.8 175 48.0
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.6e-25 119.0 169 47.9
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 4.7e-25 118.6 169 47.9
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 8.0e-25 117.9 123 59.3
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.3e-24 116.3 109 64.2
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 3.0e-24 115.9 174 49.4
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 5.2e-24 115.2 168 47.6
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 1.5e-23 113.6 177 50.3
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 4.4e-23 112.1 159 49.7
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 4.4e-23 112.1 171 48.5
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 2.2e-22 109.8 124 56.5
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 3.7e-22 109.0 115 59.1
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 3.7e-22 109.0 180 44.4
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 4.8e-22 108.6 177 45.8
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 4.8e-22 108.6 143 52.4
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 6.3e-22 108.2 178 45.5
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 8.2e-22 107.8 158 48.7
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 8.2e-22 107.8 182 46.2
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.1e-21 107.5 173 44.5
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.1e-21 107.5 173 44.5
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.8e-21 106.7 176 46.6
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.8e-21 106.7 176 46.6
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.8e-21 106.7 176 46.6
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 2.4e-21 106.3 115 52.2
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.4e-21 106.3 176 47.7
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 2.4e-21 106.3 178 45.5
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 4.1e-21 105.5 112 52.7
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 4.1e-21 105.5 112 52.7
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 7.0e-21 104.8 169 48.5
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 9.1e-21 104.4 98 62.2
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.6e-20 103.6 96 61.5
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 2.0e-20 103.2 176 47.7
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 5.9e-20 101.7 165 46.1
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 5.9e-20 101.7 96 60.4
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 5.9e-20 101.7 177 46.9
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 5.9e-20 101.7 168 47.6
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 5.9e-20 101.7 164 46.3
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 7.7e-20 101.3 115 52.2
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 7.7e-20 101.3 173 44.5
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 1.0e-19 100.9 167 43.1
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.0e-19 100.9 173 44.5
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 2.9e-19 99.4 166 45.8
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 3.8e-19 99.0 142 49.3
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 5.0e-19 98.6 178 42.7
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 5.0e-19 98.6 177 45.2
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 8.5e-19 97.8 165 45.5
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.1e-18 97.4 128 52.3
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 1.5e-18 97.1 158 45.6
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.9e-18 96.7 178 41.6
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 1.9e-18 96.7 164 45.7
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 2.5e-18 96.3 156 46.2
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 5.5e-18 95.1 177 41.8
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 5.5e-18 95.1 168 42.3
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 9.4e-18 94.4 158 41.8
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 1.2e-17 94.0 191 40.3
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.6e-17 93.6 147 43.5
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.6e-17 93.6 177 42.9
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 2.1e-17 93.2 147 43.5
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 2.1e-17 93.2 147 43.5
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 2.7e-17 92.8 176 43.2
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 3.6e-17 92.4 105 53.3
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 4.7e-17 92.0 175 42.3
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.0e-16 90.9 121 46.3
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.0e-16 90.9 177 36.7
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.4e-16 90.5 119 49.6
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 2.3e-16 89.7 153 41.8
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.0e-16 89.4 165 42.4
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 5.2e-16 88.6 158 43.7
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 1.2e-15 87.4 172 43.6
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 2.0e-15 86.7 123 47.2
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 7.5e-15 84.7 160 39.4
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 9.8e-15 84.3 145 42.1
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.3e-14 84.0 144 42.4
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.7e-14 83.6 161 39.8
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 1.7e-14 83.6 149 44.3
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 2.2e-14 83.2 116 44.8
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.8e-14 82.8 115 47.8
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 4.8e-14 82.0 73 64.4
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 8.3e-14 81.3 152 41.4
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 1.1e-13 80.9 163 38.7
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.8e-13 80.1 142 42.3
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 3.1e-13 79.3 144 45.1
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 7.0e-13 78.2 149 43.6
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.0e-12 76.6 157 42.0
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 4.5e-12 75.5 80 55.0
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 5.9e-12 75.1 200 37.0
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 1.7e-11 73.6 175 38.3
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 2.9e-11 72.8 118 44.9
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 3.8e-11 72.4 163 37.4
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 8.5e-11 71.2 120 41.7
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 8.5e-11 71.2 114 45.6
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 3.2e-10 69.3 173 37.0
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.6e-09 67.0 173 35.8
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 4.0e-08 62.4 168 36.9
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 2.0e-07 60.1 121 39.7
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 5.7e-07 58.5 67 47.8
Pp3c15_10400 Physcomitrium patens HOM05D007264 ORTHO05D008639 5.7e-07 58.5 97 44.3
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 6.3e-06 55.1 169 32.5
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 8.3e-06 54.7 75 42.7


User provided reference genes

Program Settings