Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 8.8e-201 703.4 345 100.0
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 4.0e-193 677.9 345 96.8
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 3.9e-140 501.9 342 72.2
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 6.2e-138 494.6 344 69.2
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.9e-131 473.0 347 65.7
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 2.7e-125 452.6 340 62.9
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 3.9e-124 448.7 361 60.9
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 6.7e-124 448.0 347 62.2
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 1.1e-123 447.2 348 61.2
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 4.3e-123 445.3 343 63.6
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 7.4e-123 444.5 343 63.0
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.3e-122 443.7 340 62.9
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 1.4e-121 440.3 341 61.9
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.4e-121 439.5 311 71.4
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 3.1e-121 439.1 347 62.8
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 7.7e-120 434.5 340 62.1
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 1.0e-119 434.1 340 62.4
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.0e-119 434.1 355 58.0
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 3.8e-119 432.2 349 60.7
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 5.0e-119 431.8 347 59.9
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 5.0e-119 431.8 354 59.9
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.5e-119 431.0 340 61.2
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.2e-117 427.2 345 59.1
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 1.2e-117 427.2 349 58.2
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 2.7e-117 426.0 345 60.3
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 3.6e-117 425.6 346 59.2
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 7.9e-117 424.5 333 61.6
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 7.9e-117 424.5 333 61.6
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 7.9e-117 424.5 353 58.4
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 7.9e-117 424.5 340 60.3
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.3e-116 422.9 353 58.4
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 2.3e-116 422.9 348 60.3
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.9e-116 422.2 353 58.1
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.9e-116 422.2 342 59.4
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 6.7e-116 421.4 318 63.5
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 8.8e-116 421.0 345 59.4
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 2.0e-115 419.9 346 58.1
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 3.3e-115 419.1 345 60.9
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 5.7e-115 418.3 343 60.1
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 4.8e-114 415.2 346 59.0
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 6.3e-114 414.8 349 56.4
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.4e-113 413.7 345 57.7
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.8e-113 413.3 354 57.6
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 1.8e-113 413.3 326 60.4
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 6.9e-113 411.4 347 57.1
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.5e-112 410.2 348 56.6
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 1.5e-112 410.2 346 56.9
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 2.6e-112 409.5 349 57.9
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 3.4e-112 409.1 347 57.9
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 4.5e-112 408.7 330 60.3
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 5.9e-112 408.3 347 56.8
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.0e-111 407.5 348 56.9
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.0e-111 407.5 348 57.2
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.7e-111 406.8 325 60.3
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 2.2e-111 406.4 363 55.4
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 1.1e-110 404.1 346 59.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.4e-110 403.7 349 57.6
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 2.5e-110 402.9 350 54.3
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 7.2e-110 401.4 344 57.3
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 6.1e-109 398.3 350 56.0
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 6.1e-109 398.3 340 59.4
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 7.9e-109 397.9 345 57.7
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.8e-108 396.7 348 54.3
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.8e-108 396.7 345 58.0
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 2.3e-108 396.4 345 56.5
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 5.2e-108 395.2 351 55.0
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 5.2e-108 395.2 344 57.0
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.1e-107 394.0 326 57.1
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 9.7e-107 391.0 351 54.4
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 9.7e-107 391.0 327 57.8
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.7e-106 389.0 350 53.4
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 3.1e-105 386.0 349 52.7
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 3.1e-105 386.0 349 52.7
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 5.3e-105 385.2 350 53.4
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.5e-104 382.1 345 57.1
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.0e-103 380.9 363 53.4
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 3.2e-102 375.9 345 54.8
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.5e-102 375.2 347 54.5
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 9.4e-102 374.4 273 62.6
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 2.1e-101 373.2 373 49.6
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 3.6e-101 372.5 342 54.1
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 4.4e-99 365.5 381 49.1
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 1.3e-98 364.0 368 48.4
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.2e-98 363.2 331 55.3
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.8e-98 362.8 338 53.0
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 6.3e-98 361.7 330 54.5
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 1.2e-96 357.5 327 55.7
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 4.2e-94 349.0 272 64.0
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 2.7e-93 346.3 341 52.8
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.4e-91 339.3 255 64.3
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 3.7e-90 335.9 310 55.8
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 3.7e-90 335.9 250 64.8
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.4e-84 317.4 347 51.0
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.8e-84 317.0 261 55.6
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 1.7e-82 310.5 345 48.1
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.0e-80 303.5 303 55.1
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.9e-79 299.7 215 63.7
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 7.3e-78 295.0 355 45.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.7e-77 292.4 253 57.3
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.2e-75 287.7 241 55.2
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.3e-71 274.2 262 53.8
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 2.6e-67 260.0 352 40.1
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.1e-65 254.6 210 58.6
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 2.0e-64 250.4 215 59.1
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.1e-62 244.6 181 58.0
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.3e-60 236.9 310 45.2
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 5.8e-59 232.3 243 51.4
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.2e-43 181.4 128 61.7
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 5.8e-43 179.1 126 61.1
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 8.1e-37 158.7 319 35.7
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 3.5e-32 143.3 100 67.0
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 8.1e-29 132.1 217 36.9
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 5.3e-28 129.4 146 47.3
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 2.2e-18 97.4 70 60.0
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 2.3e-15 87.4 65 66.2
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 9.3e-09 65.5 84 47.6


User provided reference genes

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