Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 1.2e-77 293.5 199 100.0
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.7e-69 265.8 202 90.6
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 4.5e-48 195.3 192 60.9
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 3.8e-47 192.2 198 58.1
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 4.2e-46 188.7 200 54.0
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 1.4e-44 183.7 189 54.5
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 1.8e-44 183.3 190 55.3
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 2.3e-44 183.0 189 54.5
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 5.2e-44 181.8 189 54.0
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 6.7e-44 181.4 189 54.0
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.7e-44 181.4 198 57.1
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 8.8e-44 181.0 189 54.0
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 8.8e-44 181.0 202 53.0
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 8.8e-44 181.0 206 57.3
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 2.0e-43 179.9 189 52.4
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.0e-43 179.9 198 52.0
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.0e-43 179.9 127 71.7
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.6e-43 179.5 198 56.6
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 3.3e-43 179.1 198 55.6
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 1.7e-42 176.8 194 52.1
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 2.8e-42 176.0 202 51.5
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 4.8e-42 175.3 189 51.9
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 4.8e-42 175.3 189 52.4
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 4.8e-42 175.3 189 51.9
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 6.3e-42 174.9 130 74.6
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 6.3e-42 174.9 130 74.6
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 6.3e-42 174.9 196 49.5
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 8.2e-42 174.5 129 65.9
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 8.2e-42 174.5 189 51.3
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 8.2e-42 174.5 192 52.6
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 8.2e-42 174.5 198 50.5
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 8.2e-42 174.5 202 55.0
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 1.1e-41 174.1 128 68.0
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 1.1e-41 174.1 131 67.2
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 1.4e-41 173.7 194 56.2
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 1.4e-41 173.7 194 56.2
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 3.1e-41 172.6 192 51.6
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 3.1e-41 172.6 198 51.5
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 3.1e-41 172.6 198 56.6
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 3.1e-41 172.6 129 72.1
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 5.3e-41 171.8 129 65.9
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 5.3e-41 171.8 127 75.6
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 7.0e-41 171.4 129 64.3
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 9.1e-41 171.0 204 53.9
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 1.2e-40 170.6 129 63.6
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 1.6e-40 170.2 130 66.2
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.6e-40 170.2 128 64.8
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.7e-40 169.5 192 51.0
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 2.7e-40 169.5 200 56.0
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 2.7e-40 169.5 128 74.2
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 3.5e-40 169.1 192 50.0
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 3.5e-40 169.1 187 55.1
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 4.5e-40 168.7 191 56.5
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 5.9e-40 168.3 128 68.0
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 1.0e-39 167.5 199 49.2
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 1.0e-39 167.5 128 69.5
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.3e-39 167.2 127 63.8
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 1.7e-39 166.8 197 50.3
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.7e-39 166.8 128 64.1
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 2.2e-39 166.4 192 66.1
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.9e-39 166.0 127 75.6
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 3.8e-39 165.6 127 71.7
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 3.8e-39 165.6 128 62.5
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 5.0e-39 165.2 191 55.5
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 6.5e-39 164.9 185 49.7
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 8.5e-39 164.5 192 46.9
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 1.5e-38 163.7 128 64.1
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.9e-38 163.3 193 49.7
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 3.2e-38 162.5 127 73.2
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 3.2e-38 162.5 127 62.2
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 7.2e-38 161.4 127 72.4
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 9.4e-38 161.0 199 49.7
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 2.7e-37 159.5 126 62.7
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.7e-37 159.5 182 54.9
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 2.7e-37 159.5 130 71.5
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 6.1e-37 158.3 118 66.9
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 6.1e-37 158.3 182 52.2
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 1.0e-36 157.5 187 50.8
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.4e-36 157.1 127 62.2
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 4.0e-36 155.6 198 48.5
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 3.4e-35 152.5 126 61.1
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 3.4e-35 152.5 116 68.1
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 4.4e-35 152.1 193 48.7
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 4.4e-35 152.1 196 46.4
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 5.7e-35 151.8 183 48.1
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 1.3e-34 150.6 196 46.4
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 6.3e-34 148.3 194 47.4
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 1.4e-33 147.1 121 59.5
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 3.1e-33 146.0 205 49.3
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 4.5e-32 142.1 109 73.4
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 7.7e-32 141.4 127 66.1
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 1.7e-31 140.2 87 73.6
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 1.7e-31 140.2 129 52.7
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 8.5e-31 137.9 87 71.3
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.1e-30 137.5 89 71.9
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 1.1e-30 137.5 194 42.3
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 3.6e-29 132.5 131 48.9
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.7e-23 113.6 94 76.6
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.7e-23 113.6 127 48.0
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 2.9e-23 112.8 128 53.9
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 6.6e-23 111.7 90 64.4
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.5e-22 109.8 120 55.8
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 1.3e-18 97.4 70 60.0
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.6e-13 80.5 138 40.6
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 2.1e-13 80.1 116 43.1
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 8.9e-12 74.7 76 51.3
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 2.6e-11 73.2 110 40.9


User provided reference genes

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