Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 1.8e-237 825.5 409 100.0
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 6.5e-235 817.0 409 98.8
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.3e-182 643.3 409 78.7
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 2.3e-171 605.9 410 75.4
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 8.7e-171 604.0 394 77.2
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 3.6e-169 598.6 407 74.7
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 2.4e-168 595.9 409 72.6
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 2.4e-168 595.9 401 74.8
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 9.0e-168 594.0 402 74.9
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.4e-167 591.7 409 74.3
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 9.9e-167 590.5 396 74.5
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.3e-166 590.1 394 75.1
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.2e-166 589.3 407 73.2
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 2.9e-166 589.0 393 75.3
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 3.8e-166 588.6 393 74.6
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.4e-166 587.8 414 74.6
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.2e-164 583.6 388 76.0
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.6e-164 583.2 409 71.9
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 2.1e-164 582.8 407 73.0
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 3.5e-164 582.0 396 74.2
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 4.6e-164 581.6 385 74.8
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.1e-162 577.0 354 78.8
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.9e-162 576.2 367 76.6
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 3.3e-162 575.5 409 72.1
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 4.3e-162 575.1 358 78.5
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 4.3e-162 575.1 369 76.2
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 4.3e-162 575.1 409 70.9
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.3e-161 573.5 376 76.9
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 1.6e-161 573.2 408 70.1
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.6e-161 573.2 409 72.1
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.6e-161 573.2 396 73.2
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.1e-161 572.8 367 77.4
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.1e-161 572.8 409 71.4
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 3.6e-161 572.0 390 74.4
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 3.6e-161 572.0 409 72.1
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 4.8e-161 571.6 409 71.6
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 1.1e-160 570.5 399 70.9
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.1e-160 570.5 409 71.1
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.4e-160 570.1 409 72.4
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 2.4e-160 569.3 393 72.5
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 3.1e-160 568.9 396 72.0
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.0e-160 568.5 371 77.4
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.2e-159 567.0 405 71.4
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.2e-159 567.0 366 76.8
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.2e-159 567.0 342 82.2
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 2.6e-159 565.8 403 71.5
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 4.5e-159 565.1 371 77.1
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 4.5e-159 565.1 395 71.4
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 5.8e-159 564.7 357 77.6
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.3e-158 563.5 374 76.7
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.3e-158 563.5 380 72.9
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 2.9e-158 562.4 402 69.9
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 3.8e-158 562.0 417 71.7
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 4.9e-158 561.6 360 74.2
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 6.4e-158 561.2 352 77.8
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 6.4e-158 561.2 402 71.4
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.1e-157 560.5 394 70.3
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 1.4e-157 560.1 400 71.8
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 2.4e-157 559.3 341 78.3
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 3.2e-157 558.9 402 69.9
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.6e-156 556.6 362 75.1
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 3.5e-156 555.4 354 76.3
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.6e-156 555.1 340 80.6
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.0e-155 553.9 340 80.3
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.0e-155 553.9 340 80.3
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.0e-155 553.9 340 80.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.8e-155 553.1 405 70.6
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 2.3e-155 552.7 402 70.1
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.0e-155 552.4 334 79.3
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 8.7e-155 550.8 368 73.9
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.9e-154 549.7 390 70.5
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.9e-154 549.7 364 75.5
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 2.5e-154 549.3 378 71.2
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 2.5e-154 549.3 359 73.3
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 3.3e-154 548.9 366 74.9
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 3.3e-154 548.9 366 74.9
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 9.6e-154 547.4 319 82.8
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 9.6e-154 547.4 344 76.2
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.3e-153 547.0 415 65.8
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 1.6e-153 546.6 341 76.2
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.1e-153 546.2 331 77.6
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 3.7e-153 545.4 365 73.7
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 3.7e-153 545.4 365 73.7
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 4.8e-153 545.0 365 73.2
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 4.8e-153 545.0 461 63.1
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 6.2e-153 544.7 346 76.3
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.1e-152 543.9 331 77.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.4e-152 543.5 341 76.2
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 4.0e-152 542.0 341 76.5
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.5e-151 540.0 400 68.0
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 4.9e-150 535.0 422 66.4
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 4.6e-148 528.5 377 68.7
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 3.0e-147 525.8 396 67.7
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 6.7e-147 524.6 299 86.0
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.6e-145 520.0 359 71.6
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.1e-144 517.3 402 66.4
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 5.8e-143 511.5 351 72.4
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 3.2e-141 505.8 408 65.9
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 5.5e-141 505.0 345 75.1
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 6.1e-140 501.5 399 65.9
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 4.1e-136 488.8 428 61.7
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 4.1e-136 488.8 332 73.2
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 9.0e-136 487.6 367 67.3
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 3.3e-130 469.2 338 67.2
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.8e-126 455.7 335 64.5
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.0e-123 447.6 387 59.2
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.3e-121 438.3 317 72.9
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.1e-120 436.0 336 61.9
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 4.5e-119 432.2 337 65.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 8.5e-110 401.4 290 69.0
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 8.8e-107 391.3 283 71.0
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.3e-86 324.3 292 55.8
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 8.0e-84 315.1 295 53.6
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 5.4e-80 302.4 321 47.0
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.2e-79 301.2 306 53.9
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.2e-76 291.2 222 66.7
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 1.7e-65 254.2 181 71.8
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.8e-52 210.3 184 62.0
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.8e-52 210.3 130 73.8
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 6.9e-43 179.1 113 78.8
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.0e-33 148.7 102 69.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.8e-27 127.9 122 54.1
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 5.5e-24 116.3 128 51.6
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 5.3e-19 99.8 64 75.0
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.5e-18 96.7 106 48.1
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 5.9e-18 96.3 185 34.6
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 5.5e-16 89.7 62 64.5


User provided reference genes

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