Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 2.7e-69 265.4 153 100.0
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 7.8e-24 114.4 155 52.3
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 8.6e-23 110.9 89 69.7
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 4.0e-20 102.1 88 67.0
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 2.6e-19 99.4 87 63.2
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.7e-18 96.7 88 60.2
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 1.7e-18 96.7 91 61.5
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 2.2e-18 96.3 88 59.1
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 2.9e-18 95.9 126 46.8
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 2.9e-18 95.9 90 57.8
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 6.4e-18 94.7 89 58.4
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.9e-17 93.2 88 58.0
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 1.9e-17 93.2 128 47.7
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 2.4e-17 92.8 89 60.7
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 2.4e-17 92.8 94 60.6
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 2.4e-17 92.8 89 59.6
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 3.2e-17 92.4 160 47.5
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 7.1e-17 91.3 137 46.0
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 7.1e-17 91.3 151 43.7
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 1.6e-16 90.1 89 55.1
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 1.6e-16 90.1 89 57.3
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 2.1e-16 89.7 87 56.3
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 2.1e-16 89.7 87 56.3
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 2.7e-16 89.4 85 57.6
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.5e-16 89.0 91 52.7
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 3.5e-16 89.0 133 42.1
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 3.5e-16 89.0 89 57.3
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 4.6e-16 88.6 89 53.9
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 7.8e-16 87.8 149 40.9
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 7.8e-16 87.8 101 52.5
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 1.0e-15 87.4 92 54.3
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 1.0e-15 87.4 91 52.7
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.3e-15 87.0 132 47.7
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 2.3e-15 86.3 96 57.3
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 2.3e-15 86.3 84 54.8
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-15 85.9 88 55.7
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 6.6e-15 84.7 88 52.3
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 6.6e-15 84.7 117 46.2
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 1.9e-14 83.2 90 54.4
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 1.9e-14 83.2 127 42.5
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 1.9e-14 83.2 84 54.8
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 1.9e-14 83.2 85 61.2
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 3.3e-14 82.4 89 46.1
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 5.6e-14 81.6 82 53.7
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 5.6e-14 81.6 88 53.4
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 7.3e-14 81.3 88 54.5
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 1.2e-13 80.5 93 53.8
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 1.2e-13 80.5 93 53.8
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 2.1e-13 79.7 89 51.7
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 2.1e-13 79.7 138 44.2
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 2.8e-13 79.3 120 45.8
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 3.6e-13 79.0 94 53.2
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 4.7e-13 78.6 92 51.1
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 6.2e-13 78.2 125 43.2
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 8.1e-13 77.8 92 51.1
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 1.8e-12 76.6 93 47.3
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 2.3e-12 76.3 83 56.6
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 2.3e-12 76.3 99 49.5
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 4.0e-12 75.5 165 38.8
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 4.0e-12 75.5 164 40.9
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 8.9e-12 74.3 89 42.7
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 1.2e-11 73.9 90 48.9
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 1.2e-11 73.9 89 49.4
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 1.5e-11 73.6 94 48.9
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 2.0e-11 73.2 91 47.3
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 3.4e-11 72.4 60 58.3
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 4.4e-11 72.0 90 47.8
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 4.4e-11 72.0 90 47.8
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 4.4e-11 72.0 128 43.8
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 5.8e-11 71.6 90 46.7
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 5.8e-11 71.6 115 40.9
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 7.6e-11 71.2 102 43.1
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 7.6e-11 71.2 92 47.8
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 9.9e-11 70.9 163 36.8
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 2.2e-10 69.7 75 61.3
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 2.2e-10 69.7 87 47.1
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 2.2e-10 69.7 91 45.1
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 2.9e-10 69.3 92 46.7
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 2.9e-10 69.3 108 40.7
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 2.9e-10 69.3 105 45.7
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 4.9e-10 68.6 162 36.4
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 6.4e-10 68.2 92 45.7
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 6.4e-10 68.2 92 45.7
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 6.4e-10 68.2 144 41.0
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 8.4e-10 67.8 91 44.0
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 8.4e-10 67.8 91 44.0
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 8.4e-10 67.8 149 35.6
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 4.1e-09 65.5 77 50.6
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 5.4e-09 65.1 94 43.6
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 5.4e-09 65.1 95 43.2
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 7.8e-08 61.2 98 41.8
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 3.0e-07 59.3 98 40.8
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 6.6e-07 58.2 98 39.8
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 8.6e-07 57.8 48 54.2
Zm00001eb141550 Zea mays HOM05D007435 ORTHO05D009338 8.6e-07 57.8 114 37.7
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 1.5e-06 57.0 164 32.3
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 1.9e-06 56.6 48 58.3
Zm00001eb363190 Zea mays HOM05D007435 ORTHO05D009338 2.5e-06 56.2 105 39.0
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 4.3e-06 55.5 102 38.2


User provided reference genes

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