Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 0.0e+00 1558.1 838 100.0
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 0.0e+00 1461.8 828 96.6
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 1.2e-278 963.4 778 63.4
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 5.0e-274 948.0 808 64.4
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 3.6e-272 941.8 802 62.7
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 2.3e-271 939.1 688 70.8
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 5.2e-271 937.9 804 65.2
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 1.2e-270 936.8 780 64.1
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 8.3e-269 930.6 813 62.2
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 9.1e-268 927.2 801 62.4
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 9.1e-268 927.2 801 62.4
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 7.2e-265 917.5 788 63.1
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 1.2e-264 916.8 806 60.5
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 4.7e-264 914.8 799 62.8
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 4.7e-264 914.8 808 61.4
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 8.0e-264 914.1 795 60.1
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 6.8e-263 911.0 800 58.0
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.1e-260 903.7 802 63.5
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 7.0e-260 901.0 797 57.6
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.0e-258 897.1 800 60.9
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 1.0e-258 897.1 792 60.7
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 6.6e-258 894.4 797 62.4
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 8.6e-258 894.0 826 60.0
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.1e-257 893.6 796 59.9
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 1.9e-257 892.9 798 58.4
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.9e-257 892.9 717 64.4
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 1.9e-257 892.9 795 59.4
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 9.5e-257 890.6 808 59.3
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 1.6e-256 889.8 588 73.6
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 1.6e-256 889.8 801 60.4
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 4.7e-256 888.3 793 61.4
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 3.1e-255 885.6 778 63.4
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 3.4e-254 882.1 798 61.5
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 4.4e-254 881.7 751 61.0
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.7e-253 879.8 794 57.4
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.7e-253 879.8 787 59.5
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.9e-253 879.0 798 61.3
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 3.0e-250 869.0 819 57.6
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 6.6e-250 867.8 788 60.5
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 9.5e-249 864.0 795 60.8
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.4e-247 860.1 694 62.4
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 5.2e-247 858.2 732 61.2
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 4.4e-246 855.1 682 63.0
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 7.5e-246 854.4 801 59.9
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.9e-244 849.7 797 60.0
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 4.3e-241 838.6 781 55.8
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.6e-240 835.5 534 71.2
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 3.1e-239 832.4 805 58.5
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 5.2e-239 831.6 691 64.3
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 6.8e-239 831.2 806 59.1
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 1.2e-238 830.5 808 56.9
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 1.2e-238 830.5 795 54.3
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 1.5e-238 830.1 813 57.3
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.5e-238 830.1 805 57.6
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 9.9e-238 827.4 814 57.1
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 4.9e-237 825.1 772 59.8
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 2.4e-236 822.8 820 56.0
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 4.1e-236 822.0 823 57.2
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 1.2e-235 820.5 725 60.6
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 4.6e-235 818.5 800 57.5
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 7.8e-235 817.8 826 57.5
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.9e-233 813.1 682 64.8
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 2.1e-232 809.7 807 56.3
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 1.4e-231 807.0 793 56.2
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 1.4e-231 807.0 805 57.9
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 3.1e-231 805.8 678 61.4
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 6.8e-231 804.7 788 58.2
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 2.9e-229 799.3 796 56.0
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 4.9e-229 798.5 704 60.7
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 7.1e-228 794.7 794 56.5
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 1.1e-225 787.3 802 53.7
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.3e-225 785.4 890 53.3
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 2.4e-223 779.6 761 56.2
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 4.0e-223 778.9 709 57.1
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 1.5e-222 776.9 777 53.8
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 7.9e-219 764.6 776 56.6
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 1.7e-218 763.5 524 67.0
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 1.3e-216 757.3 796 52.6
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 2.8e-216 756.1 813 53.8
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 1.8e-215 753.4 781 56.1
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 1.8e-215 753.4 808 54.3
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 9.0e-215 751.1 743 55.9
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 1.5e-214 750.4 789 55.8
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 2.6e-214 749.6 896 50.1
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.3e-213 747.3 884 50.3
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.4e-204 717.2 779 53.7
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 7.2e-180 635.2 608 59.7
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 3.7e-160 569.7 584 52.1
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 7.7e-158 562.0 460 59.3
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 1.5e-156 557.8 490 55.1
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 3.6e-155 553.1 377 70.0
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.3e-149 534.6 323 74.0
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 5.4e-143 512.7 570 49.8
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.3e-141 508.1 810 41.2
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 5.8e-137 492.7 582 54.1
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 9.2e-135 485.3 496 55.0
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 4.1e-127 459.9 264 77.7
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 2.2e-120 437.6 412 58.0
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 4.9e-112 409.8 346 56.4
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 3.5e-94 350.5 399 47.1
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 7.4e-92 342.8 188 80.3
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 9.3e-87 325.9 196 75.5
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 2.1e-86 324.7 343 49.9
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.3e-77 295.4 511 44.0
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 5.3e-74 283.5 347 51.9
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 1.8e-66 258.5 182 64.8
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 4.5e-41 174.1 260 51.9
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.0e-32 146.4 117 59.8
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 5.0e-32 144.1 360 30.0
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 2.3e-29 135.2 83 71.1
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 2.2e-19 102.1 77 64.9
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.9e-19 101.7 107 42.1
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 1.7e-16 92.4 72 51.4
Oeu040143.1 Olea europaea HOM05D007000 ORTHO05D288686 1.9e-07 62.4 50 60.0
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 9.5e-07 60.1 177 35.6


User provided reference genes

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