Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 3.3e-248 861.3 442 100.0
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 3.9e-225 784.6 442 92.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.0e-108 397.9 451 51.4
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 7.3e-107 391.7 436 50.0
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 1.3e-103 380.9 429 50.6
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 6.4e-103 378.6 427 50.1
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 1.9e-102 377.1 434 49.5
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.2e-101 374.4 433 47.3
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.6e-101 374.0 432 49.5
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 6.0e-101 372.1 431 48.3
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 1.0e-100 371.3 433 48.3
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 3.9e-100 369.4 416 51.0
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 5.1e-100 369.0 426 49.3
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 6.6e-100 368.6 433 47.6
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 8.6e-100 368.2 451 48.8
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.5e-99 367.5 451 48.8
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 5.6e-99 365.5 433 49.4
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 9.6e-99 364.8 423 48.7
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 2.8e-98 363.2 452 47.8
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 6.2e-98 362.1 436 49.5
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.5e-96 357.5 422 48.1
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 1.5e-96 357.5 429 47.1
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.4e-96 356.3 432 47.2
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.4e-96 355.9 429 46.9
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 4.4e-96 355.9 423 47.8
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 1.7e-95 354.0 443 45.6
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 8.4e-95 351.7 433 47.6
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.4e-94 350.1 436 46.1
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 4.2e-94 349.4 447 45.4
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 9.3e-94 348.2 430 46.0
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 2.7e-93 346.7 444 45.5
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 4.6e-93 345.9 440 46.1
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 2.3e-92 343.6 429 46.6
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 2.3e-92 343.6 426 46.2
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 3.9e-92 342.8 433 46.2
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 6.6e-92 342.0 432 46.5
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.1e-91 341.3 462 43.5
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 1.9e-91 340.5 448 45.3
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 9.6e-91 338.2 424 45.8
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.8e-90 336.7 433 43.9
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.6e-90 336.3 437 45.5
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 3.6e-90 336.3 452 44.9
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 2.4e-89 333.6 432 42.8
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 2.4e-89 333.6 430 45.8
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 2.4e-89 333.6 446 44.8
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 6.9e-89 332.0 428 43.7
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 9.0e-89 331.6 449 45.2
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 2.0e-88 330.5 432 44.4
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.6e-88 330.1 433 44.3
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 7.6e-88 328.6 449 44.5
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 1.7e-87 327.4 418 43.8
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.2e-87 327.0 494 41.7
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 2.2e-87 327.0 445 44.7
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 3.8e-87 326.2 433 44.1
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 4.9e-87 325.9 419 45.1
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.1e-86 324.7 416 44.7
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 2.4e-86 323.6 465 43.2
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 4.2e-86 322.8 440 45.5
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 4.2e-86 322.8 424 46.0
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 5.4e-86 322.4 436 42.9
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 9.3e-86 321.6 443 45.1
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.2e-85 321.2 424 44.6
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 2.1e-85 320.5 423 44.7
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 2.7e-85 320.1 419 44.9
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 4.6e-85 319.3 436 44.3
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 6.0e-85 318.9 445 42.5
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.0e-84 318.2 371 50.9
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 1.7e-84 317.4 441 42.6
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.9e-84 316.2 364 47.5
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.9e-84 316.2 364 47.5
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 4.3e-83 312.8 433 44.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 4.3e-83 312.8 381 47.5
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 7.3e-83 312.0 489 41.1
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 9.6e-83 311.6 416 44.0
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 9.6e-83 311.6 418 44.5
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 9.6e-83 311.6 431 43.2
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 2.1e-82 310.5 409 45.2
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 8.1e-82 308.5 311 49.8
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 2.0e-80 303.9 438 41.6
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 4.9e-79 299.3 407 43.7
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 8.4e-79 298.5 502 39.0
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 4.2e-78 296.2 425 44.0
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 5.4e-78 295.8 507 39.1
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 7.1e-78 295.4 423 43.3
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.2e-77 294.7 444 40.3
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.9e-75 287.3 428 43.0
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 7.4e-75 285.4 446 41.5
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 9.6e-75 285.0 319 48.6
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 6.2e-74 282.3 434 42.2
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.0e-71 275.0 420 42.1
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 3.2e-70 270.0 443 41.3
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 7.6e-64 248.8 300 49.0
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 3.8e-63 246.5 487 35.7
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 8.4e-63 245.4 440 38.4
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 4.2e-62 243.0 440 38.2
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 2.3e-60 237.3 365 39.5
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 6.3e-58 229.2 432 37.0
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 1.8e-57 227.6 304 41.8
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 5.3e-57 226.1 289 44.3
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 2.0e-56 224.2 318 40.3
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 3.4e-56 223.4 442 35.3
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 1.7e-55 221.1 195 55.9
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 6.5e-55 219.2 286 42.3
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 8.5e-55 218.8 415 35.2
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 5.5e-38 162.9 223 45.7
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.1e-35 155.2 285 38.2
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.5e-30 138.3 206 42.7
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.4e-25 120.9 151 41.1
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 2.2e-23 114.4 226 34.5
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 7.5e-19 99.4 105 46.7
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 4.1e-17 93.6 212 30.2
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 1.2e-16 92.0 108 45.4
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 6.8e-12 76.3 78 48.7
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 5.7e-11 73.2 70 52.9
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 1.3e-10 72.0 144 41.0
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 5.9e-08 63.2 55 54.5
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 3.9e-07 60.5 51 54.9
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.5e-06 58.5 131 31.3
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 5.6e-06 56.6 64 46.9


User provided reference genes

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