Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 7.5e-89 330.5 167 100.0
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.6e-83 312.8 167 94.0
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 6.9e-50 201.1 159 67.3
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 2.9e-48 195.7 124 78.2
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 4.9e-48 194.9 112 83.9
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 6.5e-48 194.5 132 72.0
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 6.5e-48 194.5 132 72.0
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.4e-47 193.4 129 72.1
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.4e-47 193.4 118 76.3
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 3.2e-47 192.2 146 65.8
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 9.3e-47 190.7 123 75.6
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 2.1e-46 189.5 130 70.8
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 3.5e-46 188.7 152 65.1
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.3e-45 186.8 129 70.5
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 1.8e-45 186.4 118 74.6
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 3.0e-45 185.7 155 60.0
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 5.1e-45 184.9 130 69.2
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 5.1e-45 184.9 142 64.8
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 5.1e-45 184.9 125 71.2
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 6.7e-45 184.5 125 72.8
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 6.7e-45 184.5 124 71.0
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.1e-44 183.7 125 72.8
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.1e-44 183.7 125 72.8
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 1.1e-44 183.7 156 60.3
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 2.5e-44 182.6 129 70.5
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 9.7e-44 180.6 138 65.9
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 9.7e-44 180.6 140 65.7
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 9.7e-44 180.6 155 58.7
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 1.3e-43 180.3 119 73.1
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.3e-43 180.3 116 73.3
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 1.3e-43 180.3 137 67.2
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 1.6e-43 179.9 146 61.0
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 1.6e-43 179.9 129 65.1
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 2.2e-43 179.5 140 65.0
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.2e-43 179.5 137 65.7
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 2.8e-43 179.1 125 68.0
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 3.7e-43 178.7 118 72.0
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 3.7e-43 178.7 118 72.0
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 3.7e-43 178.7 122 68.9
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 3.7e-43 178.7 126 68.3
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 4.8e-43 178.3 120 70.8
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 6.3e-43 177.9 144 63.2
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 6.3e-43 177.9 125 65.6
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 6.3e-43 177.9 145 64.1
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 1.4e-42 176.8 132 66.7
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 1.4e-42 176.8 158 59.5
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.8e-42 176.4 118 70.3
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 2.4e-42 176.0 140 62.9
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 3.1e-42 175.6 127 67.7
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 4.1e-42 175.3 120 68.3
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 5.3e-42 174.9 118 72.9
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 5.3e-42 174.9 149 58.4
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.2e-41 173.7 166 54.8
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 1.5e-41 173.3 182 55.5
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 2.0e-41 172.9 148 58.8
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 3.4e-41 172.2 144 61.8
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 3.4e-41 172.2 144 61.8
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 4.5e-41 171.8 130 66.9
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 4.5e-41 171.8 120 68.3
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 4.5e-41 171.8 173 52.6
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 1.0e-40 170.6 131 61.1
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 1.7e-40 169.9 166 57.2
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 2.9e-40 169.1 145 60.7
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 2.9e-40 169.1 145 60.7
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 3.8e-40 168.7 119 66.4
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 3.8e-40 168.7 114 71.9
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 8.5e-40 167.5 118 67.8
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 8.5e-40 167.5 114 71.9
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.1e-39 167.2 145 56.6
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.4e-39 166.8 117 67.5
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 1.4e-39 166.8 124 63.7
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 1.4e-39 166.8 124 63.7
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 2.5e-39 166.0 116 72.4
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 2.5e-39 166.0 143 60.8
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 3.2e-39 165.6 127 65.4
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 3.2e-39 165.6 114 69.3
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 4.2e-39 165.2 124 62.9
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 5.5e-39 164.9 165 55.2
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 1.2e-38 163.7 121 66.1
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 3.9e-37 158.7 109 68.8
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 3.9e-37 158.7 111 67.6
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 6.7e-37 157.9 115 64.3
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 6.7e-37 157.9 142 58.5
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 2.5e-36 156.0 137 56.2
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 4.3e-36 155.2 96 75.0
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 4.3e-36 155.2 120 62.5
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 9.7e-36 154.1 114 66.7
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 6.3e-35 151.4 96 77.1
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.1e-34 150.6 119 63.0
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 2.4e-34 149.4 120 58.3
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 1.4e-31 140.2 122 57.4
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 5.5e-31 138.3 156 52.6
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 4.7e-30 135.2 117 52.1
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.0e-29 134.0 135 53.3
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 3.0e-29 132.5 117 52.1
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 3.9e-29 132.1 144 50.0
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 9.7e-28 127.5 126 55.6
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.7e-27 126.7 99 64.6
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 4.8e-27 125.2 74 81.1
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 6.3e-27 124.8 116 58.6
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 4.1e-26 122.1 116 57.8
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 3.4e-25 119.0 145 49.7
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 3.4e-25 119.0 125 50.4
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 3.2e-23 112.5 69 79.7
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 3.6e-22 109.0 109 52.3
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 6.1e-22 108.2 72 68.1
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 6.7e-21 104.8 75 72.0
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 2.8e-19 99.4 62 80.6
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.0e-16 90.9 53 83.0
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 2.2e-16 89.7 63 69.8
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.2e-16 89.7 94 57.4
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.2e-15 85.9 53 71.7
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 1.6e-14 83.6 64 53.1
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 9.1e-10 67.8 102 35.3
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 2.0e-09 66.6 78 39.7
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 1.6e-06 57.0 83 42.2


User provided reference genes

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