Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 2.1e-288 995.0 489 100.0
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 6.9e-284 979.9 489 98.6
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.8e-231 805.8 489 80.0
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 3.1e-231 805.1 488 79.3
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.0e-231 804.7 489 79.8
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.2e-231 804.3 489 79.8
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 6.8e-231 803.9 489 80.2
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 6.8e-231 803.9 489 79.6
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.2e-230 803.1 489 79.8
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 2.0e-230 802.4 489 80.4
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 2.6e-230 802.0 489 80.0
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 4.4e-230 801.2 491 80.7
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 4.4e-230 801.2 489 79.1
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 7.5e-230 800.4 489 79.6
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.3e-229 799.7 488 78.9
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.7e-229 799.3 490 80.6
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 2.2e-229 798.9 489 79.6
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 2.9e-229 798.5 489 80.2
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 4.9e-229 797.7 489 80.0
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 6.4e-229 797.3 488 79.5
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.4e-228 796.2 489 79.3
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.4e-228 796.2 489 79.8
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 1.9e-228 795.8 491 80.2
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 2.4e-228 795.4 493 80.3
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 3.2e-228 795.0 489 80.0
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 4.1e-228 794.7 489 79.1
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 4.1e-228 794.7 489 80.0
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 7.1e-228 793.9 490 80.0
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 7.1e-228 793.9 489 80.2
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 2.7e-227 792.0 489 78.9
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 2.7e-227 792.0 488 79.3
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 3.5e-227 791.6 488 78.3
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 3.5e-227 791.6 488 78.5
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 4.6e-227 791.2 490 79.6
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 7.8e-227 790.4 489 80.0
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 1.7e-226 789.3 488 78.7
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 2.3e-226 788.9 490 79.8
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 3.9e-226 788.1 489 79.1
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.1e-225 786.6 490 79.6
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 3.3e-225 785.0 490 79.4
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 4.3e-225 784.6 489 77.9
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 3.6e-224 781.6 490 78.6
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 4.7e-224 781.2 490 79.0
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 3.1e-223 778.5 494 77.7
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 3.1e-223 778.5 489 78.5
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 8.9e-223 776.9 490 78.6
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 3.4e-222 775.0 480 80.4
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 5.8e-222 774.2 490 78.2
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.6e-222 773.9 489 78.5
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.6e-222 773.9 490 78.6
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 2.9e-221 771.9 521 74.5
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.7e-221 771.5 489 78.5
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 4.9e-221 771.2 489 78.1
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 1.4e-220 769.6 490 77.3
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.9e-220 769.2 490 77.1
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 2.4e-220 768.8 489 78.3
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.4e-220 767.7 493 78.1
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 5.4e-220 767.7 493 78.1
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 7.1e-220 767.3 489 78.1
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 2.1e-219 765.8 493 77.7
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 6.0e-219 764.2 489 77.5
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 7.8e-219 763.8 491 77.6
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 2.3e-218 762.3 489 76.3
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 5.1e-218 761.1 490 78.4
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.1e-217 760.0 421 86.0
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.9e-217 759.2 490 78.2
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 3.3e-217 758.4 492 76.8
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 2.1e-216 755.7 489 77.3
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 2.8e-216 755.4 490 75.7
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 3.6e-216 755.0 490 77.6
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 3.6e-216 755.0 489 75.7
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.4e-215 753.1 490 76.1
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 2.4e-215 752.3 490 77.1
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.5e-214 749.6 491 77.4
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 2.0e-214 749.2 489 75.9
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 2.6e-214 748.8 487 75.6
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 2.6e-214 748.8 489 75.9
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 5.8e-214 747.7 486 76.3
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.7e-213 746.1 491 77.0
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.7e-213 746.1 491 77.0
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 4.9e-213 744.6 489 75.5
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 8.4e-213 743.8 489 74.8
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 4.2e-212 741.5 491 75.6
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 5.4e-212 741.1 393 89.6
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 5.4e-212 741.1 488 76.6
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 5.4e-212 741.1 489 74.8
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 7.1e-212 740.7 396 88.9
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 7.1e-212 740.7 394 89.1
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 9.3e-212 740.3 396 88.9
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 9.3e-212 740.3 394 88.8
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-211 740.0 394 89.1
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 1.6e-211 739.6 393 89.3
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 3.5e-211 738.4 489 74.6
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 5.1e-210 734.6 489 75.1
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.9e-209 732.6 486 73.5
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 3.6e-208 728.4 393 87.5
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 4.8e-208 728.0 490 74.1
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 4.8e-200 701.4 427 77.8
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 2.4e-199 699.1 489 72.8
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 2.0e-198 696.0 464 74.1
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 3.9e-194 681.8 412 78.4
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 1.9e-193 679.5 394 83.2
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 9.6e-193 677.2 450 74.4
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 4.8e-192 674.9 431 73.3
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 6.2e-192 674.5 389 80.2
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.4e-188 663.3 400 77.2
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 9.3e-180 634.0 389 79.7
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 7.4e-177 624.4 392 74.5
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 5.1e-170 601.7 437 70.5
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.8e-167 593.2 389 68.6
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 6.9e-167 591.3 489 64.0
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 2.2e-165 586.3 392 68.4
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.5e-156 556.2 289 91.3
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 5.2e-154 548.5 289 89.6
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.4e-135 487.3 348 71.8
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 6.6e-133 478.4 295 76.9
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.0e-102 375.6 237 77.2
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.5e-100 370.2 274 68.6
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.4e-82 310.5 172 83.7
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.1e-62 242.7 196 62.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 7.9e-62 242.3 130 86.9
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.3e-60 236.5 135 84.4
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.3e-59 235.0 139 80.6
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.1e-47 195.3 140 72.1
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 5.5e-39 166.4 163 54.6
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 8.8e-37 159.1 94 83.0
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 3.6e-30 137.1 105 64.8
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 4.7e-14 83.6 59 67.8
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 1.5e-07 62.0 127 30.7
Oeu029778.1 Olea europaea HOM05D000776 ORTHO05D001624 9.5e-07 59.3 161 26.7
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 2.8e-06 57.8 128 32.0
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 3.6e-06 57.4 167 26.3
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 3.6e-06 57.4 159 27.7


User provided reference genes

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