Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 1.5e-194 682.6 330 100.0
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 2.2e-132 476.1 252 92.5
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 3.9e-97 359.0 249 72.3
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 1.5e-93 347.1 245 68.6
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 2.0e-93 346.7 245 67.8
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 2.6e-93 346.3 246 68.3
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 4.5e-93 345.5 246 69.1
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 5.8e-93 345.1 262 65.6
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 7.6e-93 344.7 250 66.4
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.0e-92 344.4 249 66.7
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 1.3e-92 344.0 240 67.5
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 2.2e-92 343.2 248 67.7
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 6.5e-92 341.7 249 66.3
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 8.4e-92 341.3 251 64.9
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 1.1e-91 340.9 245 66.9
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 1.4e-91 340.5 241 67.6
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 7.1e-91 338.2 242 65.3
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.2e-90 337.4 244 66.8
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.2e-90 337.4 249 65.1
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.6e-90 337.0 247 66.4
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 1.6e-90 337.0 238 69.3
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.6e-90 337.0 247 64.8
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 3.5e-90 335.9 245 67.8
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 4.6e-90 335.5 247 65.2
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 1.0e-89 334.3 247 66.0
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 2.3e-89 333.2 239 65.7
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 3.9e-89 332.4 247 64.4
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 3.9e-89 332.4 265 61.1
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 6.7e-89 331.6 249 65.1
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 6.7e-89 331.6 249 64.7
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 1.1e-88 330.9 244 65.6
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 1.1e-88 330.9 245 64.9
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 1.5e-88 330.5 249 64.3
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.9e-88 330.1 240 64.6
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 1.9e-88 330.1 239 65.3
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.5e-88 329.7 240 65.4
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 2.5e-88 329.7 246 65.0
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 3.3e-88 329.3 245 65.7
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 7.4e-88 328.2 247 64.8
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 7.4e-88 328.2 249 61.8
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 9.7e-88 327.8 244 65.6
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 2.2e-87 326.6 234 66.7
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 2.2e-87 326.6 262 61.1
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.8e-87 326.2 251 63.7
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 6.3e-87 325.1 254 63.4
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 6.3e-87 325.1 247 63.2
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.1e-86 324.3 245 62.9
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.4e-86 323.2 241 63.9
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 4.1e-86 322.4 240 63.8
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 4.1e-86 322.4 254 61.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 5.3e-86 322.0 253 62.8
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 9.0e-86 321.2 254 63.8
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.2e-85 320.9 242 62.0
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.5e-85 320.5 245 62.4
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 2.6e-85 319.7 240 62.5
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 3.4e-85 319.3 245 63.3
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 3.4e-85 319.3 243 62.1
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 4.5e-85 318.9 282 56.4
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 7.7e-85 318.2 236 63.1
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 7.7e-85 318.2 243 63.4
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 1.0e-84 317.8 243 62.1
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 1.7e-84 317.0 239 61.9
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 2.9e-84 316.2 245 62.4
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 3.8e-84 315.8 245 62.4
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 5.0e-84 315.5 245 62.4
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 8.5e-84 314.7 242 63.6
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.4e-83 313.9 250 62.8
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 7.2e-83 311.6 242 61.2
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.6e-82 309.3 249 61.4
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.6e-82 309.3 309 52.8
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 1.0e-81 307.8 242 62.8
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 1.4e-81 307.4 252 59.5
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.8e-81 307.0 246 62.2
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 3.9e-81 305.8 253 58.1
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 3.3e-80 302.8 206 67.5
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.7e-79 300.4 259 60.2
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.0e-76 291.2 237 59.5
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 3.2e-75 286.2 263 54.8
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 3.2e-75 286.2 280 53.9
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 2.1e-74 283.5 261 54.4
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 7.9e-74 281.6 255 58.0
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 1.5e-72 277.3 249 58.2
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 4.8e-71 272.3 301 48.2
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 1.1e-70 271.2 176 72.7
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 3.5e-69 266.2 204 62.7
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 5.9e-69 265.4 179 69.8
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.9e-67 260.4 180 67.2
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 8.0e-66 255.0 179 71.5
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.8e-65 253.8 213 56.8
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.8e-65 253.8 273 49.1
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 2.3e-65 253.4 179 64.8
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 8.8e-65 251.5 277 48.4
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 1.8e-62 243.8 263 53.2
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 5.9e-61 238.8 254 52.4
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 7.2e-59 231.9 283 45.9
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 8.8e-57 224.9 328 43.6
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 7.5e-56 221.9 252 50.0
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 7.0e-46 188.7 183 55.7
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.3e-44 184.5 137 65.0
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 4.0e-41 172.9 135 61.5
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 6.8e-41 172.2 116 69.0
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.3e-20 104.8 89 59.6
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 8.1e-18 95.5 94 48.9
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 5.2e-17 92.8 86 53.5
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 4.7e-10 69.7 40 70.0
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.4e-09 68.2 159 30.2
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 3.1e-09 67.0 169 30.2
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 7.6e-08 62.4 182 28.0
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.7e-07 61.2 265 25.7
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 1.7e-07 61.2 168 29.8
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 2.2e-07 60.8 120 30.8
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 2.2e-07 60.8 189 29.1
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 2.9e-07 60.5 267 26.2
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 2.9e-07 60.5 221 29.4
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 3.8e-07 60.1 265 25.7
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 3.8e-07 60.1 265 25.7
MELO3C007826.2 Cucumis melo HOM05D005677 ORTHO05D006966 4.9e-07 59.7 272 29.0
Prupe.7G154600 Prunus persica HOM05D005677 ORTHO05D006966 4.9e-07 59.7 224 26.8
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 4.9e-07 59.7 138 30.4
ClCG01G019540 Citrullus lanatus HOM05D005677 ORTHO05D006966 6.4e-07 59.3 256 28.5
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 8.4e-07 58.9 121 31.4
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 8.4e-07 58.9 120 31.7
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 8.4e-07 58.9 120 31.7
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 8.4e-07 58.9 185 25.4
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 8.4e-07 58.9 120 30.0
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 1.1e-06 58.5 120 31.7
Dinv39987 Davidia involucrata HOM05D005677 ORTHO05D006966 1.1e-06 58.5 151 31.1
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 1.4e-06 58.2 152 26.3
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 1.9e-06 57.8 120 31.7
FAN28G0162 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.9e-06 57.8 172 30.2
HanXRQChr09g0261461 Helianthus annuus HOM05D005677 ORTHO05D006966 1.9e-06 57.8 186 29.6
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 2.4e-06 57.4 140 32.9
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 2.4e-06 57.4 119 29.4
CsaV3_6G046230 Cucumis sativus L. HOM05D005677 ORTHO05D006966 2.4e-06 57.4 272 28.3
ECA232G2278 Erigeron canadensis HOM05D005677 ORTHO05D006966 2.4e-06 57.4 120 33.3
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 2.4e-06 57.4 119 27.7
Lsat_1_v5_gn_4_152101 Lactuca sativa HOM05D005677 ORTHO05D006966 2.4e-06 57.4 138 30.4
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 2.4e-06 57.4 169 25.4
BcaC07g39550 Brassica carinata HOM05D005677 ORTHO05D006966 3.2e-06 57.0 120 32.5
BraA09t39853Z Brassica rapa HOM05D005677 ORTHO05D006966 3.2e-06 57.0 140 30.0
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 3.2e-06 57.0 178 27.0
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 3.2e-06 57.0 139 30.9
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 3.2e-06 57.0 198 27.3
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 4.2e-06 56.6 120 29.2
FAN23G0294 Fragaria x ananassa HOM05D005677 ORTHO05D006966 5.4e-06 56.2 100 34.0
Nitab4.5_0000178g0070 Nicotiana tabacum HOM05D005677 ORTHO05D006966 5.4e-06 56.2 225 28.0
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 7.1e-06 55.8 128 28.1
BolC8t50224H Brassica oleracea HOM05D005677 ORTHO05D006966 9.3e-06 55.5 191 28.3
CiPaw.01G038100 Carya illinoinensis HOM05D005677 ORTHO05D006966 9.3e-06 55.5 255 26.7


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