Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 9.7e-104 380.2 195 100.0
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 2.7e-85 318.9 204 85.3
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 2.3e-52 209.5 197 63.5
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 2.5e-51 206.1 178 64.0
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.6e-50 203.4 163 66.3
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 8.1e-50 201.1 135 78.5
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 8.1e-50 201.1 135 78.5
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 4.0e-49 198.7 199 57.3
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 6.8e-49 198.0 199 60.3
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 3.4e-48 195.7 138 73.9
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 5.8e-48 194.9 157 66.9
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 9.9e-48 194.1 151 67.5
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 2.9e-47 192.6 204 55.9
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.7e-47 192.2 121 77.7
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.7e-47 192.2 121 77.7
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 6.4e-47 191.4 121 76.9
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 6.4e-47 191.4 147 67.3
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 8.3e-47 191.0 149 65.8
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 8.3e-47 191.0 153 68.0
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.1e-46 190.7 124 78.2
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.9e-46 189.9 124 75.8
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.9e-46 189.9 140 70.7
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.1e-46 188.7 197 57.4
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 7.1e-46 188.0 169 63.9
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 9.2e-46 187.6 181 58.0
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 2.1e-45 186.4 167 64.1
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.7e-45 186.0 146 68.5
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.5e-45 185.7 173 58.4
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 4.6e-45 185.3 201 53.7
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 7.8e-45 184.5 124 73.4
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.7e-44 183.3 159 63.5
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.7e-44 183.3 153 64.7
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 2.3e-44 183.0 189 57.1
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 3.0e-44 182.6 179 58.1
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 3.0e-44 182.6 200 54.5
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 3.9e-44 182.2 185 57.8
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 3.9e-44 182.2 159 60.4
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 3.9e-44 182.2 115 79.1
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 5.1e-44 181.8 141 66.0
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 6.6e-44 181.4 182 55.5
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 8.6e-44 181.0 148 65.5
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 8.6e-44 181.0 122 73.8
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.1e-43 180.6 136 69.1
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.1e-43 180.6 122 71.3
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.9e-43 179.9 124 70.2
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 2.5e-43 179.5 170 59.4
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 2.5e-43 179.5 179 57.5
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 2.5e-43 179.5 198 52.5
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 3.3e-43 179.1 122 72.1
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 3.3e-43 179.1 124 69.4
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 4.3e-43 178.7 124 73.4
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 5.6e-43 178.3 202 48.5
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 9.5e-43 177.6 130 66.2
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 2.1e-42 176.4 156 60.9
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.8e-42 176.0 196 53.6
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 4.7e-42 175.3 199 52.8
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 6.2e-42 174.9 131 64.9
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.1e-41 174.1 197 49.7
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.1e-41 174.1 197 49.7
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 1.1e-41 174.1 156 60.9
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 5.2e-41 171.8 138 64.5
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 5.2e-41 171.8 115 73.9
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 6.8e-41 171.4 126 69.0
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 8.9e-41 171.0 197 50.3
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 8.9e-41 171.0 196 50.0
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 8.9e-41 171.0 196 50.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 8.9e-41 171.0 162 60.5
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 8.9e-41 171.0 125 70.4
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 8.9e-41 171.0 125 68.8
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.2e-40 170.6 163 58.9
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.5e-40 170.2 141 61.7
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.0e-40 169.9 162 57.4
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 3.4e-40 169.1 141 65.2
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.6e-40 167.9 122 70.5
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 7.6e-40 167.9 166 58.4
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 9.9e-40 167.5 157 59.2
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 9.9e-40 167.5 164 57.9
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.3e-39 167.2 195 52.8
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.9e-39 166.0 193 52.3
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 4.9e-39 165.2 200 53.0
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.1e-38 164.1 124 65.3
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 3.5e-37 159.1 171 55.0
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 8.6e-36 154.5 204 49.0
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 2.5e-35 152.9 159 55.3
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 7.3e-35 151.4 203 45.8
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 2.4e-33 146.4 147 56.5
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 3.1e-33 146.0 123 64.2
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 7.6e-32 141.4 204 47.1
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 4.2e-30 135.6 202 46.0
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 9.3e-30 134.4 190 45.3
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 9.3e-30 134.4 190 45.3
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 9.3e-30 134.4 203 44.8
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 7.8e-29 131.3 128 55.5
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 1.1e-27 127.5 199 40.2
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.5e-27 127.1 120 51.7
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 4.5e-24 115.5 144 46.5
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.3e-23 114.0 82 67.1
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 2.9e-23 112.8 82 67.1
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.4e-22 109.8 91 64.8
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.1e-22 108.2 91 63.7
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.2e-21 107.5 363 27.8
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.1e-17 94.4 81 63.0
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 6.2e-10 68.6 53 64.2
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.9e-09 65.1 52 61.5
MCO16G381 Micromonas commoda HOM05D007282 ORTHO05D009214 1.0e-07 61.2 84 38.1
PRCOL_00001877 Prasinoderma coloniale HOM05D007282 ORTHO05D009214 7.1e-06 55.1 119 32.8
PRCOL_00005178 Prasinoderma coloniale HOM05D007282 ORTHO05D049198 9.3e-06 54.7 111 36.0


User provided reference genes

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