Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 9.1e-128 460.3 240 100.0
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 1.0e-110 403.7 241 89.6
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 1.3e-78 297.0 240 64.6
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 7.3e-77 291.2 247 60.3
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 2.0e-74 283.1 239 60.3
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 7.5e-74 281.2 241 62.7
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 2.2e-73 279.6 239 59.0
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 2.9e-73 279.3 239 59.0
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 2.9e-73 279.3 245 58.4
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 1.1e-72 277.3 239 61.1
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 1.9e-72 276.6 240 60.4
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 1.2e-71 273.9 238 60.5
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.2e-71 273.9 239 61.5
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 1.2e-71 273.9 243 60.9
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 2.1e-71 273.1 249 58.2
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 2.1e-71 273.1 248 58.9
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 2.1e-71 273.1 240 58.3
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 4.6e-71 271.9 248 58.1
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 6.0e-71 271.6 242 57.0
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 2.3e-70 269.6 251 56.2
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 3.0e-70 269.2 271 55.4
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 3.9e-70 268.9 209 63.2
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 5.1e-70 268.5 240 57.9
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 1.1e-69 267.3 239 59.8
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 1.9e-69 266.5 239 60.3
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 2.5e-69 266.2 245 59.2
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 4.3e-69 265.4 240 59.6
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 9.5e-69 264.2 247 59.9
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 2.1e-68 263.1 238 57.6
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 8.1e-68 261.2 211 61.6
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 8.1e-68 261.2 243 58.4
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 1.4e-67 260.4 239 57.3
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 4.0e-67 258.8 243 56.8
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 5.2e-67 258.5 232 64.2
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 5.2e-67 258.5 240 57.9
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 8.9e-67 257.7 239 56.9
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 1.5e-66 256.9 239 58.6
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 1.5e-66 256.9 244 55.7
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 1.5e-66 256.9 245 54.3
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 2.0e-66 256.5 242 57.9
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 2.6e-66 256.1 239 57.7
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.4e-66 255.8 245 54.3
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 7.6e-66 254.6 253 58.5
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 9.9e-66 254.2 249 55.4
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 1.7e-65 253.4 246 58.1
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 2.9e-65 252.7 209 59.3
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 3.8e-65 252.3 249 56.6
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 3.8e-65 252.3 240 53.3
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 4.9e-65 251.9 210 59.0
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 6.4e-65 251.5 244 57.0
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 8.4e-65 251.1 261 53.3
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 1.4e-64 250.4 245 53.5
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 3.2e-64 249.2 238 53.8
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 5.4e-64 248.4 238 55.0
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 7.1e-64 248.1 244 54.1
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 7.1e-64 248.1 241 54.4
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.2e-63 247.3 238 52.9
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 1.2e-63 247.3 207 62.8
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 2.7e-63 246.1 238 52.9
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 2.7e-63 246.1 238 52.9
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 3.5e-63 245.7 242 52.1
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 3.5e-63 245.7 242 52.1
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 3.5e-63 245.7 245 53.5
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 1.0e-62 244.2 241 52.7
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 3.0e-62 242.7 216 56.5
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 6.6e-62 241.5 240 54.2
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 6.6e-62 241.5 241 52.7
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 6.6e-62 241.5 206 56.8
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 6.6e-62 241.5 213 60.1
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 5.6e-61 238.4 242 53.3
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 1.2e-60 237.3 199 55.8
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 1.6e-60 236.9 247 53.8
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 2.1e-60 236.5 240 51.7
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 4.7e-60 235.3 199 55.3
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 2.4e-59 233.0 158 69.0
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 2.6e-58 229.6 213 53.1
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 3.4e-58 229.2 244 51.2
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 4.4e-58 228.8 205 56.1
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 7.6e-58 228.0 240 50.8
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.7e-57 226.9 195 56.9
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.2e-55 220.7 211 51.2
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 1.2e-55 220.7 228 50.9
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 2.3e-54 216.5 198 52.0
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 3.0e-54 216.1 216 50.5
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 6.6e-54 214.9 245 49.4
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 3.3e-53 212.6 240 48.8
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 1.6e-52 210.3 129 72.9
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 2.1e-52 209.9 199 51.8
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 6.2e-52 208.4 140 66.4
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 4.8e-44 182.2 251 44.2
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 6.2e-44 181.8 112 71.4
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 8.1e-44 181.4 172 54.7
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.1e-43 181.0 118 66.9
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.2e-41 173.3 108 69.4
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 6.4e-41 171.8 108 68.5
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 9.3e-40 167.9 135 54.1
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 4.6e-39 165.6 108 63.0
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 4.3e-37 159.1 318 35.2
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 5.8e-34 148.7 185 45.9
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 7.1e-32 141.7 93 69.9
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 2.1e-31 140.2 112 58.9
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 9.7e-29 131.3 141 46.1
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 6.5e-25 118.6 77 63.6
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 7.2e-24 115.2 76 63.2
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 2.5e-21 106.7 122 43.4
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 2.2e-20 103.6 181 34.3
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 2.4e-19 100.1 68 69.1
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 2.4e-19 100.1 68 69.1
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 1.7e-17 94.0 61 67.2
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.5e-16 90.1 58 67.2
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 1.2e-15 87.8 142 45.1
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 1.2e-15 87.8 125 38.4
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 1.7e-12 77.4 71 47.9
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 1.4e-11 74.3 134 39.6
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 5.0e-09 65.9 53 58.5
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 5.0e-09 65.9 53 58.5
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 5.0e-09 65.9 43 60.5
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 3.9e-06 56.2 135 32.6


User provided reference genes

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