Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4803 Papaver somniferum HOM05D003703 ORTHO05D004278 2.5e-92 342.0 166 100.0
PSO017G5564 Papaver somniferum HOM05D003703 ORTHO05D004278 1.1e-79 300.1 154 95.5
PSO675G1999 Papaver somniferum HOM05D003703 ORTHO05D004278 3.9e-77 291.6 156 90.4
PSO063G6729 Papaver somniferum HOM05D003703 ORTHO05D004278 2.5e-76 288.9 154 91.6
TAR633G0624 Trochodendron aralioides HOM05D004867 ORTHO05D005729 7.6e-33 144.4 151 53.0
Aqoxy2G00073 Aquilegia oxysepala HOM05D003703 ORTHO05D004278 6.5e-32 141.4 157 51.0
Manes.09G033600 Manihot esculenta HOM05D003703 ORTHO05D004278 3.3e-28 129.0 145 51.7
CiPaw.10G027200 Carya illinoinensis HOM05D003703 ORTHO05D004278 4.3e-28 128.6 149 46.3
Potri.016G047800 Populus trichocarpa HOM05D003703 ORTHO05D004278 1.3e-27 127.1 152 48.7
CiPaw.09G031500 Carya illinoinensis HOM05D003703 ORTHO05D004278 2.8e-27 125.9 136 50.0
Nitab4.5_0000016g0390 Nicotiana tabacum HOM05D003703 ORTHO05D004278 2.8e-27 125.9 141 49.6
Sabra16G0051300 Salix brachista HOM05D003703 ORTHO05D004278 2.8e-27 125.9 151 48.3
Cpa.g.c33371 Carica papaya HOM05D003703 ORTHO05D004278 4.8e-27 125.2 143 52.4
Atru.chr8.1077 Acer truncatum HOM05D003703 ORTHO05D004278 6.2e-27 124.8 148 48.6
Potri.006G191100 Populus trichocarpa HOM05D003703 ORTHO05D004278 6.2e-27 124.8 151 47.7
CSS0005195 Camellia sinensis var. sinensis HOM05D003703 ORTHO05D004278 8.2e-27 124.4 140 51.4
HanXRQChr10g0300741 Helianthus annuus HOM05D003703 ORTHO05D004278 8.2e-27 124.4 140 50.0
Gohir.D09G123500 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.1e-26 124.0 151 47.7
Duzib106G1084 Durio zibethinus HOM05D003703 ORTHO05D004278 1.4e-26 123.6 151 45.0
Gorai.006G142100 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.4e-26 123.6 151 47.7
Sabra06G0146400 Salix brachista HOM05D003703 ORTHO05D004278 1.4e-26 123.6 151 48.3
Nitab4.5_0002035g0010 Nicotiana tabacum HOM05D003703 ORTHO05D004278 2.4e-26 122.9 140 49.3
COL.COLO4_36150 Corchorus olitorius HOM05D003703 ORTHO05D004278 3.1e-26 122.5 154 47.4
Gohir.A09G127300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 5.3e-26 121.7 151 47.0
MBI01_g36100_MAGBIO Magnolia biondii HOM05D003703 ORTHO05D004278 5.3e-26 121.7 154 50.0
QL07p023397 Quercus lobata HOM05D003703 ORTHO05D004278 5.3e-26 121.7 149 48.3
TAR369G1018 Trochodendron aralioides HOM05D003703 ORTHO05D004278 5.3e-26 121.7 150 49.3
Lsat_1_v5_gn_9_26721 Lactuca sativa HOM05D003703 ORTHO05D004278 6.9e-26 121.3 135 48.1
Thecc.05G169900 Theobroma cacao HOM05D003703 ORTHO05D004278 6.9e-26 121.3 152 46.7
Duzib093G1286 Durio zibethinus HOM05D003703 ORTHO05D004278 1.2e-25 120.6 151 46.4
Gohir.D04G098100 Gossypium hirsutum HOM05D003703 ORTHO05D004278 2.0e-25 119.8 151 45.7
Gorai.006G067100 Gossypium raimondii HOM05D003703 ORTHO05D004278 2.0e-25 119.8 151 45.7
RcHm_v2.0_Chr3g0479981 Rosa chinensis HOM05D003703 ORTHO05D004278 2.6e-25 119.4 149 50.3
ECA247G0725 Erigeron canadensis HOM05D003703 ORTHO05D004278 3.4e-25 119.0 146 46.6
Manes.08G045500 Manihot esculenta HOM05D003703 ORTHO05D004278 4.5e-25 118.6 140 47.1
Ciclev10012846m.g Citrus clementina HOM05D003703 ORTHO05D004278 1.3e-24 117.1 139 48.9
Lsat_1_v5_gn_8_74300 Lactuca sativa HOM05D003703 ORTHO05D004278 2.9e-24 115.9 139 48.9
MD14G1059200 Malus domestica HOM05D003703 ORTHO05D004278 2.9e-24 115.9 149 48.3
FAN09G0581 Fragaria x ananassa HOM05D003703 ORTHO05D004278 3.8e-24 115.5 149 48.3
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla HOM05D003703 ORTHO05D004278 3.8e-24 115.5 135 47.4
DCAR_013556 Daucus carota HOM05D003703 ORTHO05D004278 5.0e-24 115.2 135 47.4
FvH4_6g22530 Fragaria vesca HOM05D003703 ORTHO05D004278 5.0e-24 115.2 149 48.3
FAN14G3432 Fragaria x ananassa HOM05D003703 ORTHO05D004278 5.0e-24 115.2 149 48.3
FAN14G3905 Fragaria x ananassa HOM05D003703 ORTHO05D004278 5.0e-24 115.2 149 48.3
Rhsim03G0008400 Rhododendron simsii HOM05D003703 ORTHO05D004278 6.5e-24 114.8 146 47.3
CAN.G515.11 Capsicum annuum HOM05D003703 ORTHO05D004278 8.4e-24 114.4 146 45.9
FAN02G0416 Fragaria x ananassa HOM05D003703 ORTHO05D004278 8.4e-24 114.4 149 47.7
Prupe.7G075500 Prunus persica HOM05D003703 ORTHO05D004278 8.4e-24 114.4 147 50.3
Haze_19973 Corylus avellana HOM05D003703 ORTHO05D004278 1.9e-23 113.2 128 51.6
MD12G1058500 Malus domestica HOM05D003703 ORTHO05D004278 2.5e-23 112.8 147 49.7
FAN05G5107 Fragaria x ananassa HOM05D003703 ORTHO05D004278 4.2e-23 112.1 149 47.7
Lalb_Chr15g0078951 Lupinus albus HOM05D003703 ORTHO05D004278 5.5e-23 111.7 137 48.9
MSTRG.10837 Avicennia marina HOM05D003703 ORTHO05D004278 7.1e-23 111.3 139 49.6
Peaxi162Scf00258g00023 Petunia axillaris HOM05D003703 ORTHO05D004278 7.1e-23 111.3 154 43.5
Gohir.D01G177600 Gossypium hirsutum HOM05D003703 ORTHO05D004278 9.3e-23 110.9 152 45.4
Gorai.002G225600 Gossypium raimondii HOM05D003703 ORTHO05D004278 1.2e-22 110.5 151 45.0
Gohir.A01G192300 Gossypium hirsutum HOM05D003703 ORTHO05D004278 1.6e-22 110.2 152 45.4
DCAR_019841 Daucus carota HOM05D003703 ORTHO05D004278 2.1e-22 109.8 121 48.8
Cc06_g16110 Coffea canephora HOM05D003703 ORTHO05D004278 3.5e-22 109.0 150 43.3
Migut.K00046 Erythranthe guttata HOM05D003703 ORTHO05D004278 6.1e-22 108.2 143 45.5
Actinidia22024 Actinidia chinensis HOM05D003703 ORTHO05D004278 7.9e-22 107.8 146 45.9
Cfa020181 Carpinus fangiana HOM05D003703 ORTHO05D004278 2.3e-21 106.3 139 47.5
EL10Ac3g06932 Beta vulgaris HOM05D003703 ORTHO05D004278 6.7e-21 104.8 167 40.7
Actinidia40438 Actinidia chinensis HOM05D003703 ORTHO05D004278 1.1e-20 104.0 146 46.6
Solyc03g063550.1 Solanum lycopersicum HOM05D003703 ORTHO05D004278 1.1e-20 104.0 136 46.3
Sopen03g016210 Solanum pennellii HOM05D003703 ORTHO05D004278 1.1e-20 104.0 136 46.3
Lju124C28G5 Lonicera japonica HOM05D003703 ORTHO05D004278 1.5e-20 103.6 135 45.2
Oeu035192.1 Olea europaea HOM05D003703 ORTHO05D004278 1.5e-20 103.6 135 46.7
PGSC0003DMG400009700 Solanum tuberosum HOM05D003703 ORTHO05D004278 1.5e-20 103.6 135 45.9
AUR62024314 Chenopodium quinoa HOM05D003703 ORTHO05D004278 2.5e-20 102.8 169 40.2
TWI53G0257 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 2.5e-20 102.8 135 49.6
Actinidia38577 Actinidia chinensis HOM05D003703 ORTHO05D004278 3.3e-20 102.4 152 45.4
AUR62012046 Chenopodium quinoa HOM05D003703 ORTHO05D004278 4.3e-20 102.1 163 41.1
Ah.13g075990 Amaranthus hybridus HOM05D003703 ORTHO05D004278 7.4e-20 101.3 165 41.8
MSTRG.6472 Avicennia marina HOM05D003703 ORTHO05D004278 2.2e-19 99.8 140 42.1
MELO3C021570.2 Cucumis melo HOM05D003703 ORTHO05D004278 4.8e-19 98.6 135 42.2
CANSAT64G0621 Cannabis sativa HOM05D003703 ORTHO05D004278 1.1e-18 97.4 155 43.2
ClCG09G019210 Citrullus lanatus HOM05D003703 ORTHO05D004278 1.1e-18 97.4 134 44.0
TWI74G0378 Tripterygium wilfordii HOM05D003703 ORTHO05D004278 1.1e-18 97.4 140 47.1
Ah.04g152400 Amaranthus hybridus HOM05D003703 ORTHO05D004278 1.4e-18 97.1 163 42.9
CsaV3_5G027200 Cucumis sativus L. HOM05D003703 ORTHO05D004278 1.4e-18 97.1 135 43.0
Eucgr.K01832 Eucalyptus grandis HOM05D003703 ORTHO05D004278 1.8e-18 96.7 140 44.3
MSTRG.19899 Avicennia marina HOM05D003703 ORTHO05D004278 2.4e-18 96.3 146 41.1
PGR004G2865 Punica granatum HOM05D003703 ORTHO05D004278 2.4e-18 96.3 144 44.4
Lj2P370T14 Lonicera japonica HOM05D003703 ORTHO05D004278 6.9e-18 94.7 146 40.4
Dinv24085 Davidia involucrata HOM05D001227 ORTHO05D001082 9.0e-18 94.4 131 42.7
BraA10t45001Z Brassica rapa HOM05D003703 ORTHO05D004278 1.2e-17 94.0 137 40.9
SGA_v2.0_scaffold94G28431 Striga asiatica HOM05D003703 ORTHO05D004278 1.2e-17 94.0 152 42.1
Oeu007772.1 Olea europaea HOM05D003703 ORTHO05D004278 2.0e-17 93.2 146 45.2
Migut.J01826 Erythranthe guttata HOM05D003703 ORTHO05D004278 2.6e-17 92.8 150 40.0
A10p29590 Brassica napus HOM05D003703 ORTHO05D004278 3.4e-17 92.4 137 40.9
Carub.0006s0568 Capsella rubella HOM05D003703 ORTHO05D004278 3.4e-17 92.4 151 39.1
THA.LOC104826767 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 3.4e-17 92.4 139 42.4
Carub.0005s2479 Capsella rubella HOM05D003703 ORTHO05D004278 4.5e-17 92.0 136 39.7
THA.LOC104802486 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 5.9e-17 91.7 156 39.1
SalBow1G5050 Salvia bowleyana HOM05D003703 ORTHO05D004278 7.7e-17 91.3 131 40.5
CARHR206390 Cardamine hirsuta HOM05D003703 ORTHO05D004278 1.0e-16 90.9 140 43.6
DCAR_017017 Daucus carota HOM05D003703 ORTHO05D004278 1.3e-16 90.5 141 41.1
Sed0017921 Sechium edule HOM05D003703 ORTHO05D004278 1.3e-16 90.5 135 40.7
Lalb_Chr07g0188981 Lupinus albus HOM05D003703 ORTHO05D004278 2.2e-16 89.7 164 37.2
DCAR_017016 Daucus carota HOM05D003703 ORTHO05D004278 3.8e-16 89.0 135 40.7
Sp6g36065 Schrenkiella parvula HOM05D003703 ORTHO05D004278 3.8e-16 89.0 136 41.9
Sc25g0005120 Simmondsia chinensis HOM05D003703 ORTHO05D004278 8.5e-16 87.8 129 46.5
BcaC06g32542 Brassica carinata HOM05D003703 ORTHO05D004278 1.1e-15 87.4 147 41.5
Lalb_Chr18g0047801 Lupinus albus HOM05D003703 ORTHO05D004278 1.1e-15 87.4 158 39.2
VMungo0720G2172 Vigna mungo HOM05D003703 ORTHO05D004278 1.4e-15 87.0 138 39.1
AL6G16900 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 1.9e-15 86.7 139 43.2
SGA_v2.0_scaffold4546G54500 Striga asiatica HOM05D003703 ORTHO05D004278 1.9e-15 86.7 150 38.7
ECA248G0990 Erigeron canadensis HOM05D003703 ORTHO05D004278 2.5e-15 86.3 137 40.9
Glyma.09G112700 Glycine max HOM05D003703 ORTHO05D004278 3.2e-15 85.9 162 37.7
Medtr7g093040 Medicago truncatula HOM05D003703 ORTHO05D004278 3.2e-15 85.9 157 40.8
Thhalv10006259m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 4.2e-15 85.5 157 37.6
AT3G57950 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 5.5e-15 85.1 158 39.9
BcaC07g40166 Brassica carinata HOM05D003703 ORTHO05D004278 5.5e-15 85.1 157 36.9
A09p50780 Brassica napus HOM05D003703 ORTHO05D004278 7.2e-15 84.7 157 36.3
BraA09t40525Z Brassica rapa HOM05D003703 ORTHO05D004278 7.2e-15 84.7 157 36.3
AL5G39600 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 9.4e-15 84.3 136 41.9
Psat3g069120 Pisum sativum HOM05D003703 ORTHO05D004278 9.4e-15 84.3 155 37.4
SalBow1G5631 Salvia bowleyana HOM05D003703 ORTHO05D004278 9.4e-15 84.3 131 38.2
Sp5g04770 Schrenkiella parvula HOM05D003703 ORTHO05D004278 9.4e-15 84.3 158 38.0
A04p02830 Brassica napus HOM05D003703 ORTHO05D004278 1.2e-14 84.0 134 41.0
BolC8t50948H Brassica oleracea HOM05D003703 ORTHO05D004278 1.2e-14 84.0 158 36.1
BraA04t16007Z Brassica rapa HOM05D003703 ORTHO05D004278 1.2e-14 84.0 134 41.0
TPR.G18214 Trifolium pratense HOM05D003703 ORTHO05D004278 1.2e-14 84.0 152 38.2
BcaC06g32394 Brassica carinata HOM05D003703 ORTHO05D004278 2.1e-14 83.2 146 37.7
C08p33500 Brassica napus HOM05D003703 ORTHO05D004278 2.1e-14 83.2 158 36.1
BolC9t59739H Brassica oleracea HOM05D003703 ORTHO05D004278 2.1e-14 83.2 146 37.7
Glyma.03G143800 Glycine max HOM05D003703 ORTHO05D004278 2.1e-14 83.2 144 40.3
THA.LOC104824607 Tarenaya hassleriana HOM05D003703 ORTHO05D004278 2.1e-14 83.2 141 39.7
C09p69970 Brassica napus HOM05D003703 ORTHO05D004278 2.7e-14 82.8 147 37.4
Ca_08513_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 2.7e-14 82.8 156 37.8
Thhalv10014619m.g Eutrema salsugineum HOM05D003703 ORTHO05D004278 2.7e-14 82.8 145 39.3
AT5G06790 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 3.6e-14 82.4 136 41.2
BolC4t25006H Brassica oleracea HOM05D003703 ORTHO05D004278 3.6e-14 82.4 136 38.2
Aa31LG10G12650 Aethionema arabicum HOM05D003703 ORTHO05D004278 4.6e-14 82.0 155 38.1
Glyma.02G178400 Glycine max HOM05D003703 ORTHO05D004278 4.6e-14 82.0 158 37.3
Phvul.007G258900 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 4.6e-14 82.0 138 38.4
BcaB02g08287 Brassica carinata HOM05D003703 ORTHO05D004278 7.9e-14 81.3 133 39.1
CDE05G1581 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 7.9e-14 81.3 121 40.5
BcaB02g08285 Brassica carinata HOM05D003703 ORTHO05D004278 1.0e-13 80.9 155 36.8
ECA236G4442 Erigeron canadensis HOM05D003703 ORTHO05D004278 1.8e-13 80.1 152 38.2
CDE02G1004 Ceratophyllum demersum HOM05D003703 ORTHO05D004278 2.3e-13 79.7 121 40.5
Sed0013585 Sechium edule HOM05D003703 ORTHO05D004278 2.3e-13 79.7 137 40.1
PGR142G3046 Punica granatum HOM05D003703 ORTHO05D004278 3.9e-13 79.0 146 38.4
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea HOM05D003703 ORTHO05D004278 5.1e-13 78.6 140 39.3
Psat6g128520 Pisum sativum HOM05D003703 ORTHO05D004278 6.7e-13 78.2 157 35.7
Glyma.19G146900 Glycine max HOM05D003703 ORTHO05D004278 2.5e-12 76.3 149 36.9
Phvul.001G141500 Phaseolus vulgaris HOM05D003703 ORTHO05D004278 2.5e-12 76.3 157 37.6
Lj1g0027593 Lotus japonicus HOM05D003703 ORTHO05D004278 3.3e-12 75.9 158 37.3
HanXRQChr13g0389341 Helianthus annuus HOM05D003703 ORTHO05D004278 5.7e-12 75.1 135 37.8
TPR.G27747 Trifolium pratense HOM05D003703 ORTHO05D004278 5.7e-12 75.1 163 35.0
VMungo1383G3663 Vigna mungo HOM05D003703 ORTHO05D004278 7.4e-12 74.7 160 36.2
BcaC02g09974 Brassica carinata HOM05D003703 ORTHO05D004278 9.7e-12 74.3 155 36.1
Lj5g0003065 Lotus japonicus HOM05D003703 ORTHO05D004278 1.3e-11 73.9 151 35.8
BcaC02g09973 Brassica carinata HOM05D003703 ORTHO05D004278 1.7e-11 73.6 135 37.8
CARHR168260 Cardamine hirsuta HOM05D003703 ORTHO05D004278 1.7e-11 73.6 151 35.8
ClCG10G017430 Citrullus lanatus HOM05D003703 ORTHO05D004278 1.7e-11 73.6 143 37.8
CsaV3_3G038930 Cucumis sativus L. HOM05D003703 ORTHO05D004278 1.7e-11 73.6 139 33.8
SHI16104 Sapria himalayana HOM05D003703 ORTHO05D004278 1.7e-11 73.6 152 36.2
C04p34420 Brassica napus HOM05D003703 ORTHO05D004278 2.8e-11 72.8 155 35.5
Sc13g0002220 Simmondsia chinensis HOM05D003703 ORTHO05D004278 3.1e-10 69.3 145 38.6
SalBow6G1024 Salvia bowleyana HOM05D003703 ORTHO05D004278 4.1e-10 68.9 135 36.3
SalBow6G3273 Salvia bowleyana HOM05D003703 ORTHO05D004278 4.1e-10 68.9 135 36.3
Eucgr.A02445 Eucalyptus grandis HOM05D003703 ORTHO05D004278 9.1e-10 67.8 154 35.1
Sp4g24360 Schrenkiella parvula HOM05D003703 ORTHO05D004278 2.0e-09 66.6 71 54.9
C04p34430 Brassica napus HOM05D003703 ORTHO05D004278 2.6e-09 66.2 133 34.6
BcaC02g12466 Brassica carinata HOM05D003703 ORTHO05D004278 4.5e-09 65.5 75 49.3
BolC4t21971H Brassica oleracea HOM05D003703 ORTHO05D004278 4.5e-09 65.5 75 49.3
Medtr1g053900 Medicago truncatula HOM05D003703 ORTHO05D004278 5.9e-09 65.1 153 33.3
Sc19g0006980 Simmondsia chinensis HOM05D003703 ORTHO05D004278 5.9e-09 65.1 92 44.6
AT2G42180 Arabidopsis thaliana HOM05D003703 ORTHO05D004278 1.0e-08 64.3 77 46.8
C04p03340 Brassica napus HOM05D003703 ORTHO05D004278 1.0e-08 64.3 75 48.0
BraA05t19267Z Brassica rapa HOM05D003703 ORTHO05D004278 1.0e-08 64.3 75 48.0
Os09g0279200 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 1.0e-08 64.3 106 37.7
Ca_25700_v3 Cicer arietinum L. HOM05D003703 ORTHO05D004278 2.9e-08 62.8 135 32.6
ATR0605G366 Amborella trichopoda HOM05D003703 ORTHO05D004278 5.0e-08 62.0 37 75.7
AL4G40540 Arabidopsis lyrata HOM05D003703 ORTHO05D004278 8.5e-08 61.2 71 52.1
BcaNung04405 Brassica carinata HOM05D003703 ORTHO05D004278 8.5e-08 61.2 63 54.0
A05p02750 Brassica napus HOM05D003703 ORTHO05D004278 8.5e-08 61.2 75 46.7
Carub.0004s2452 Capsella rubella HOM05D003703 ORTHO05D004278 1.4e-07 60.5 81 44.4
Os04g0665666 Oryza sativa ssp. japonica HOM05D003703 ORTHO05D004278 3.2e-07 59.3 149 34.2


User provided reference genes

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