Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4707 Papaver somniferum HOM05D007482 ORTHO05D003038 5.2e-65 250.8 115 100.0
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 3.6e-58 228.0 115 90.4
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 4.4e-56 221.1 115 87.0
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 6.0e-53 210.7 116 83.6
PSO630G0001 Papaver somniferum HOM05D007482 ORTHO05D003038 1.7e-47 192.6 95 89.5
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 5.4e-46 187.6 118 73.7
PSO339G4924 Papaver somniferum HOM05D033620 ORTHO05D003038 7.7e-16 87.4 113 38.9
PSO339G5535 Papaver somniferum HOM05D033620 ORTHO05D003038 1.3e-15 86.7 121 40.5
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 8.5e-15 84.0 108 38.9
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.5e-14 82.4 103 41.7
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 7.2e-14 80.9 121 36.4
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 2.1e-13 79.3 113 35.4
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.1e-13 79.3 103 39.8
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.7e-13 79.0 103 37.9
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 3.6e-13 78.6 115 36.5
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 7.9e-13 77.4 113 38.1
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 7.9e-13 77.4 130 36.9
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.0e-12 77.0 104 40.4
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.0e-12 77.0 114 38.6
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 1.8e-12 76.3 115 35.7
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.3e-12 75.9 115 40.9
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 5.1e-12 74.7 115 36.5
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 8.8e-12 73.9 128 32.8
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 1.1e-11 73.6 116 36.2
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 2.0e-11 72.8 114 33.3
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 2.5e-11 72.4 114 36.0
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 4.3e-11 71.6 106 32.1
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 4.3e-11 71.6 124 34.7
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 4.3e-11 71.6 124 34.7
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 4.3e-11 71.6 132 32.6
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 5.7e-11 71.2 114 36.8
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 7.4e-11 70.9 132 31.8
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 7.4e-11 70.9 124 33.9
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 9.7e-11 70.5 113 33.6
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 1.3e-10 70.1 128 32.0
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 1.3e-10 70.1 103 36.9
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-10 69.7 102 35.3
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-10 69.7 102 35.3
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-10 69.7 102 35.3
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.7e-10 69.7 115 34.8
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 2.2e-10 69.3 115 37.4
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 3.7e-10 68.6 95 38.9
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 3.7e-10 68.6 116 35.3
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 4.8e-10 68.2 116 35.3
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 8.2e-10 67.4 112 37.5
A05p29150 Brassica napus HOM05D007482 ORTHO05D003038 8.2e-10 67.4 118 34.7
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 8.2e-10 67.4 116 33.6
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 1.1e-09 67.0 115 36.5
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 1.1e-09 67.0 108 38.9
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 1.4e-09 66.6 95 37.9
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.8e-09 66.2 85 40.0
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.8e-09 66.2 113 33.6
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 2.4e-09 65.9 110 31.8
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 2.4e-09 65.9 116 34.5
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 4.1e-09 65.1 119 30.3
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 5.3e-09 64.7 128 33.6
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 5.3e-09 64.7 122 32.0
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 5.3e-09 64.7 107 37.4
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 9.1e-09 63.9 115 33.9
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 1.5e-08 63.2 114 35.1
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 2.0e-08 62.8 125 33.6
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 2.6e-08 62.4 127 33.1
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 3.4e-08 62.0 107 34.6
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 3.4e-08 62.0 119 31.9
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 5.9e-08 61.2 110 29.1
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 5.9e-08 61.2 117 31.6
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 5.9e-08 61.2 117 31.6
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 5.9e-08 61.2 110 29.1
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 5.9e-08 61.2 87 39.1
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 7.7e-08 60.8 131 32.1
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 1.0e-07 60.5 77 41.6
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.0e-07 60.5 112 32.1
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 1.0e-07 60.5 91 40.7
PSO791G0001 Papaver somniferum HOM05D048766 ORTHO05D003038 1.7e-07 59.7 113 32.7
PSO832G3804 Papaver somniferum HOM05D048766 ORTHO05D003038 1.7e-07 59.7 113 32.7
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.2e-07 59.3 121 31.4
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 2.9e-07 58.9 121 31.4
CiPaw.02G152000 Carya illinoinensis HOM05D005672 ORTHO05D003038 3.8e-07 58.5 120 32.5
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 2.5e-06 55.8 96 30.2
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 2.5e-06 55.8 113 33.6
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 3.2e-06 55.5 126 31.7
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 3.2e-06 55.5 113 30.1
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 4.2e-06 55.1 89 33.7
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 4.2e-06 55.1 119 31.9
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 4.2e-06 55.1 79 38.0
CAN.G438.58 Capsicum annuum HOM05D005672 ORTHO05D003038 5.5e-06 54.7 119 31.1
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 7.2e-06 54.3 121 28.9


User provided reference genes

Program Settings