Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 1.9e-251 872.1 446 100.0
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 4.6e-250 867.5 446 99.6
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 8.3e-167 590.9 449 70.4
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 5.9e-165 584.7 449 69.5
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 8.6e-140 501.1 417 65.2
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 4.1e-134 482.3 444 57.7
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 1.6e-133 480.3 441 59.6
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 3.5e-133 479.2 448 59.4
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 4.6e-133 478.8 446 59.6
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 6.6e-132 474.9 448 58.9
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 3.3e-131 472.6 448 58.3
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 7.3e-131 471.5 448 58.5
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 4.7e-130 468.8 446 57.6
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 8.1e-130 468.0 445 57.5
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 2.4e-129 466.5 449 57.5
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 4.0e-129 465.7 372 65.9
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 1.5e-128 463.8 448 58.9
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.0e-128 463.4 444 56.3
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 4.9e-127 458.8 448 55.1
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.4e-126 457.2 445 56.9
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 2.4e-126 456.4 445 57.1
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 2.4e-126 456.4 461 55.5
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 3.2e-126 456.1 381 64.6
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 3.2e-126 456.1 449 57.5
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 5.4e-126 455.3 445 57.3
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 5.4e-126 455.3 419 60.1
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 7.1e-126 454.9 448 56.7
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 7.1e-126 454.9 449 56.8
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 7.1e-126 454.9 473 56.0
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 1.3e-124 450.7 444 56.5
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 1.7e-124 450.3 447 57.9
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 3.0e-124 449.5 415 59.0
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 5.1e-124 448.7 456 54.8
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 1.9e-123 446.8 457 55.4
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 9.6e-123 444.5 410 58.8
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 2.1e-122 443.4 408 60.3
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 2.1e-122 443.4 436 56.7
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 2.8e-122 443.0 441 56.0
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 2.8e-122 443.0 460 55.2
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 3.6e-122 442.6 419 57.8
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 3.6e-122 442.6 446 55.4
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.4e-121 440.7 448 55.8
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 5.3e-121 438.7 432 56.2
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 3.4e-120 436.0 454 53.5
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 7.6e-120 434.9 427 56.2
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 7.6e-120 434.9 449 54.8
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 9.9e-120 434.5 449 53.2
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 1.7e-119 433.7 406 60.1
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 2.9e-119 433.0 418 56.9
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 4.9e-119 432.2 449 54.3
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 8.4e-119 431.4 447 52.6
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 1.9e-118 430.3 381 61.2
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 5.4e-118 428.7 476 52.1
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 7.1e-118 428.3 454 51.5
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 7.1e-118 428.3 373 60.9
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 9.3e-118 427.9 402 58.0
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 2.1e-117 426.8 407 56.3
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 2.7e-117 426.4 440 54.1
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 3.5e-117 426.0 413 55.7
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 6.0e-117 425.2 401 57.1
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 7.8e-117 424.9 442 54.8
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 1.0e-116 424.5 445 53.0
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 1.0e-116 424.5 447 53.9
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 1.7e-116 423.7 397 57.7
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 3.9e-116 422.5 478 50.4
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 5.1e-116 422.2 425 56.5
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 8.7e-116 421.4 442 52.3
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 1.1e-115 421.0 426 55.6
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 3.3e-115 419.5 442 53.8
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 5.6e-115 418.7 340 62.1
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 5.6e-115 418.7 440 52.7
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 9.6e-115 417.9 441 53.1
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 8.1e-114 414.8 441 52.4
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 8.1e-114 414.8 472 51.3
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.1e-113 414.5 469 51.2
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 1.1e-113 414.5 409 56.5
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.4e-113 414.1 430 52.3
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 4.0e-113 412.5 441 52.2
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 3.4e-112 409.5 439 52.4
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 5.8e-112 408.7 443 52.4
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 5.8e-112 408.7 451 51.9
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 5.8e-112 408.7 425 52.9
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 9.9e-112 407.9 456 50.7
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.7e-111 407.1 425 52.7
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 2.2e-111 406.8 417 54.4
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 2.9e-111 406.4 393 56.7
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 4.9e-111 405.6 320 63.8
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 6.4e-111 405.2 446 52.2
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 6.4e-111 405.2 434 53.0
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.9e-110 403.7 435 52.2
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 2.1e-109 400.2 423 53.2
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 2.1e-109 400.2 418 52.6
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 2.7e-109 399.8 422 53.6
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 6.0e-109 398.7 411 52.8
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.3e-108 397.5 432 52.1
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 8.7e-108 394.8 309 66.3
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 7.4e-107 391.7 407 54.3
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 7.4e-107 391.7 413 52.5
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 7.4e-107 391.7 413 52.5
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 9.6e-107 391.3 317 60.6
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 1.6e-106 390.6 388 55.7
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 2.8e-106 389.8 441 52.6
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 2.4e-105 386.7 443 51.2
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 1.5e-104 384.0 383 53.8
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 2.0e-104 383.6 402 51.7
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 2.6e-104 383.3 397 51.9
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 2.9e-103 379.8 342 58.5
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 8.4e-103 378.3 398 53.3
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 5.5e-102 375.6 397 51.1
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 1.2e-101 374.4 426 49.5
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.2e-101 374.4 412 51.5
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 1.0e-100 371.3 404 50.0
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 1.8e-100 370.5 363 52.9
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 3.0e-100 369.8 351 55.0
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 4.3e-99 365.9 477 48.0
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 4.3e-99 365.9 374 53.7
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 2.1e-98 363.6 387 53.2
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 2.1e-98 363.6 397 54.4
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 2.0e-96 357.1 452 47.1
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 2.6e-96 356.7 277 68.2
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 2.6e-96 356.7 318 58.2
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 5.8e-96 355.5 426 49.3
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 1.0e-95 354.8 324 56.8
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 4.9e-95 352.4 462 47.0
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 6.5e-95 352.1 475 45.9
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 8.4e-95 351.7 264 67.4
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.2e-93 347.8 508 42.9
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 7.9e-93 345.1 404 48.5
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 3.9e-92 342.8 329 53.8
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 1.1e-91 341.3 486 44.9
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 4.3e-91 339.3 420 47.1
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.6e-90 337.4 445 45.4
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 2.8e-90 336.7 401 48.6
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 3.7e-90 336.3 404 48.3
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 1.3e-87 327.8 359 51.5
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 2.9e-87 326.6 404 46.8
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 1.9e-86 323.9 435 43.9
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 2.7e-85 320.1 401 43.9
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-83 314.7 429 45.5
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 1.1e-81 308.1 375 47.2
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 5.3e-81 305.8 375 46.9
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 5.3e-81 305.8 283 57.6
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 1.0e-79 301.6 352 46.6
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 2.2e-79 300.4 375 44.5
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 6.5e-79 298.9 357 47.9
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 8.5e-79 298.5 353 49.3
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 2.1e-77 293.9 348 48.3
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 3.6e-69 266.5 207 66.2
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 2.7e-61 240.4 369 39.8
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 8.5e-55 218.8 169 68.6
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 1.5e-54 218.0 168 68.5
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 4.9e-50 203.0 278 46.8
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 1.1e-49 201.8 420 33.3
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 7.0e-49 199.1 153 65.4
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 2.9e-42 177.2 200 46.5
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 9.2e-41 172.2 144 56.2
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 5.6e-38 162.9 142 62.0
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 3.4e-35 153.7 94 78.7
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 1.0e-31 142.1 165 46.7
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.0e-27 127.9 131 54.2
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 1.9e-25 121.3 143 47.6
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 2.4e-25 120.9 119 49.6
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 3.0e-23 114.0 95 57.9
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 2.5e-22 110.9 91 61.5
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 7.3e-22 109.4 91 58.2
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 2.8e-21 107.5 98 56.1
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 8.9e-20 102.4 84 59.5
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 2.3e-15 87.8 304 29.6
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 5.1e-15 86.7 94 53.2
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 3.1e-12 77.4 61 65.6
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 1.3e-10 72.0 54 57.4
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 1.3e-10 72.0 54 57.4
Thecc.09G274800 Theobroma cacao HOM05D003649 ORTHO05D004498 8.4e-10 69.3 79 50.6
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 1.1e-09 68.9 49 63.3
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 4.2e-09 67.0 101 42.6
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 6.0e-08 63.2 184 33.2
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 3.0e-07 60.8 146 32.9
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 3.0e-07 60.8 39 69.2
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 1.5e-06 58.5 170 28.8
Actinidia38362 Actinidia chinensis HOM05D000548 ORTHO05D006036 4.3e-06 57.0 72 47.2


User provided reference genes

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