Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 4.4e-106 387.9 184 100.0
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 4.4e-106 387.9 184 100.0
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 2.8e-76 288.9 178 77.0
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 8.9e-67 257.3 173 69.4
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 8.9e-67 257.3 177 66.7
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 4.4e-66 255.0 177 66.1
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 7.6e-66 254.2 177 66.1
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 2.2e-65 252.7 173 68.8
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 2.9e-65 252.3 173 68.2
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 3.3e-61 238.8 174 64.4
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 1.4e-59 233.4 177 63.8
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 3.1e-59 232.3 177 62.7
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 7.9e-47 191.0 177 49.7
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.0e-46 190.7 177 50.3
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 6.7e-38 161.4 165 50.9
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-37 159.8 170 49.4
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-36 156.8 109 67.0
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.0e-30 137.5 183 41.5
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 2.8e-28 129.4 170 37.1
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 4.8e-28 128.6 170 37.1
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 4.8e-28 128.6 170 37.1
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 6.3e-28 128.3 168 37.5
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 6.3e-28 128.3 176 38.6
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 1.1e-27 127.5 165 39.4
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 1.1e-27 127.5 187 38.0
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 1.8e-27 126.7 170 37.1
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 1.8e-27 126.7 170 37.1
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 3.1e-27 125.9 166 36.7
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 5.3e-27 125.2 171 33.9
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 9.0e-27 124.4 184 37.5
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.5e-26 123.6 189 32.8
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 1.5e-26 123.6 180 38.9
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.0e-26 123.2 189 32.8
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 2.0e-26 123.2 165 35.2
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 2.6e-26 122.9 163 38.7
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 2.6e-26 122.9 173 37.0
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 3.4e-26 122.5 165 35.2
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 4.5e-26 122.1 183 35.0
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 1.0e-25 120.9 166 36.1
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.3e-25 120.6 171 38.6
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 1.3e-25 120.6 173 36.4
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 2.2e-25 119.8 174 39.7
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 2.2e-25 119.8 183 36.1
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.9e-25 119.4 178 36.0
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 3.8e-25 119.0 174 39.7
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 5.0e-25 118.6 177 35.6
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 5.0e-25 118.6 180 36.7
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 6.5e-25 118.2 169 34.9
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 8.5e-25 117.9 174 40.2
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 8.5e-25 117.9 174 39.1
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 8.5e-25 117.9 170 35.9
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 8.5e-25 117.9 173 36.4
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 1.1e-24 117.5 183 35.5
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 1.4e-24 117.1 170 36.5
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 1.9e-24 116.7 174 38.5
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 1.9e-24 116.7 173 39.3
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 1.9e-24 116.7 163 36.8
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 3.2e-24 115.9 166 35.5
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.2e-24 115.9 166 34.3
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 4.2e-24 115.5 144 38.9
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 4.2e-24 115.5 165 34.5
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 5.5e-24 115.2 167 35.9
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 5.5e-24 115.2 166 34.9
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.2e-24 114.8 168 33.9
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.2e-24 114.8 168 33.9
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 7.2e-24 114.8 158 38.0
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 9.4e-24 114.4 177 33.3
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 9.4e-24 114.4 168 33.9
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 9.4e-24 114.4 165 37.0
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.2e-23 114.0 176 35.2
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 1.2e-23 114.0 169 37.9
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 2.1e-23 113.2 170 37.1
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 2.1e-23 113.2 168 32.7
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 3.6e-23 112.5 172 34.3
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 3.6e-23 112.5 161 35.4
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 6.1e-23 111.7 169 35.5
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 6.1e-23 111.7 166 32.5
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 7.9e-23 111.3 166 32.5
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 1.0e-22 110.9 166 35.5
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.0e-22 110.9 161 35.4
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 1.8e-22 110.2 169 36.7
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.8e-22 110.2 166 35.5
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 1.8e-22 110.2 166 33.7
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 1.8e-22 110.2 166 31.9
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 2.3e-22 109.8 166 33.1
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.1e-22 108.6 167 33.5
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 6.7e-22 108.2 166 38.0
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 8.8e-22 107.8 166 32.5
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 1.1e-21 107.5 162 35.2
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.1e-21 107.5 166 32.5
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 1.1e-21 107.5 167 34.1
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 1.5e-21 107.1 166 32.5
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.5e-21 107.1 169 32.0
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.5e-21 107.1 161 36.0
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.5e-21 107.1 166 32.5
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.5e-21 107.1 173 31.8
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 1.5e-21 107.1 168 33.3
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 2.0e-21 106.7 166 33.7
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 3.3e-21 105.9 165 33.3
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 4.3e-21 105.5 168 32.7
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 5.7e-21 105.1 166 35.5
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 9.7e-21 104.4 166 34.9
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 9.7e-21 104.4 169 37.9
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 9.7e-21 104.4 166 32.5
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.3e-20 104.0 166 34.9
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.7e-20 103.6 172 32.6
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 3.7e-20 102.4 160 36.2
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.7e-20 102.4 179 33.0
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.7e-20 102.4 172 32.0
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 4.8e-20 102.1 169 30.8
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.8e-20 102.1 169 30.8
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 6.3e-20 101.7 154 37.0
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 6.3e-20 101.7 166 34.9
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 1.1e-19 100.9 168 31.5
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.8e-19 100.1 170 33.5
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 4.1e-19 99.0 166 31.3
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 4.1e-19 99.0 173 31.8
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 4.1e-19 99.0 182 30.8
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 5.3e-19 98.6 166 28.9
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.3e-19 98.6 166 28.9
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.5e-18 97.1 166 31.9
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.0e-18 96.7 168 32.1
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 2.6e-18 96.3 166 31.3
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 2.6e-18 96.3 169 32.5
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 7.7e-18 94.7 166 31.3
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 1.7e-17 93.6 183 32.8
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.2e-17 93.2 204 27.9
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 1.9e-16 90.1 161 29.8
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 1.9e-16 90.1 166 30.7
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 1.9e-16 90.1 171 30.4
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 3.2e-16 89.4 176 29.0
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 7.2e-16 88.2 176 33.0
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 9.4e-16 87.8 135 34.1
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 9.4e-16 87.8 138 39.9
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 1.6e-15 87.0 166 30.1
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 2.1e-15 86.7 166 30.7
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 1.0e-14 84.3 107 42.1
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.4e-14 84.0 160 29.4
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 3.3e-13 79.3 170 28.2
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.7e-12 75.9 100 39.0
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 6.3e-12 75.1 108 33.3
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 1.1e-11 74.3 122 33.6
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 1.8e-11 73.6 111 32.4
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 1.8e-11 73.6 88 40.9
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 4.1e-11 72.4 102 37.3
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 4.1e-11 72.4 185 29.2
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 4.5e-10 68.9 111 33.3
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 1.0e-09 67.8 140 32.1
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 3.8e-09 65.9 101 30.7
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 8.5e-09 64.7 99 33.3
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 2.5e-08 63.2 150 28.0
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 3.2e-08 62.8 121 26.4
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 3.2e-08 62.8 144 28.5
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 2.1e-07 60.1 78 35.9
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 1.4e-06 57.4 78 34.6
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 3.0e-06 56.2 73 34.2


User provided reference genes

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