Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 4.9e-155 551.2 298 100.0
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 1.1e-127 460.3 254 97.2
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 1.6e-57 227.3 303 48.5
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 1.0e-56 224.6 311 48.2
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 2.0e-55 220.3 303 47.2
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 1.3e-54 217.6 293 50.2
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 3.5e-52 209.5 225 57.8
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 1.5e-50 204.1 306 45.1
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 1.5e-50 204.1 300 46.7
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 2.7e-49 199.9 337 45.4
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 4.0e-48 196.1 311 42.8
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 6.8e-48 195.3 229 49.8
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 1.2e-47 194.5 240 50.0
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 1.2e-47 194.5 335 43.6
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 5.7e-47 192.2 312 43.3
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 2.2e-46 190.3 291 47.4
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 2.2e-46 190.3 341 41.6
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 2.8e-46 189.9 309 44.0
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 4.8e-46 189.1 319 44.2
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 6.3e-46 188.7 312 44.6
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 8.3e-46 188.3 302 46.7
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 8.3e-46 188.3 199 55.8
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 1.1e-45 188.0 304 43.1
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 1.8e-45 187.2 224 50.4
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 2.4e-45 186.8 312 44.9
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 4.1e-45 186.0 329 41.6
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 2.0e-44 183.7 265 45.3
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 2.0e-44 183.7 324 42.3
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 2.7e-44 183.3 175 54.9
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 2.7e-44 183.3 155 63.2
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 4.5e-44 182.6 310 43.9
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 4.5e-44 182.6 152 62.5
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 7.7e-44 181.8 274 45.6
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 1.3e-43 181.0 323 41.2
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 2.2e-43 180.3 216 52.3
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 2.2e-43 180.3 223 48.0
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 3.8e-43 179.5 241 46.1
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 3.8e-43 179.5 281 45.6
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 1.5e-42 177.6 297 44.8
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 3.2e-42 176.4 160 58.8
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 4.2e-42 176.0 168 59.5
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 4.2e-42 176.0 205 52.2
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 2.1e-41 173.7 184 54.3
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 2.1e-41 173.7 184 54.3
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 3.6e-41 172.9 292 41.1
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 3.6e-41 172.9 174 55.2
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 1.0e-40 171.4 186 53.2
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 1.4e-40 171.0 177 54.8
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 2.3e-40 170.2 175 54.3
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 2.3e-40 170.2 292 40.8
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 4.0e-40 169.5 212 47.6
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 6.8e-40 168.7 159 57.2
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 1.5e-39 167.5 233 47.2
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 2.6e-39 166.8 183 52.5
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 2.6e-39 166.8 294 43.2
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 4.4e-39 166.0 301 41.5
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 5.7e-39 165.6 239 46.4
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 5.7e-39 165.6 227 47.1
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 1.3e-38 164.5 257 45.5
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 1.7e-38 164.1 248 45.6
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 2.8e-38 163.3 261 47.1
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 1.1e-37 161.4 292 43.8
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 2.4e-37 160.2 253 42.7
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 7.0e-37 158.7 304 39.5
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 1.6e-36 157.5 237 43.9
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 1.6e-36 157.5 243 46.1
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 2.7e-36 156.8 237 43.5
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 2.7e-36 156.8 237 43.5
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 5.9e-36 155.6 232 46.1
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 1.3e-35 154.5 216 46.3
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 1.3e-35 154.5 216 46.3
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 1.7e-35 154.1 241 43.2
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 1.7e-35 154.1 253 43.5
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 2.3e-35 153.7 241 42.7
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 2.9e-35 153.3 212 47.6
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 2.9e-35 153.3 240 44.6
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 2.9e-35 153.3 239 44.4
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 2.9e-35 153.3 160 56.9
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 2.9e-35 153.3 242 44.2
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 5.0e-35 152.5 243 44.4
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 1.1e-34 151.4 255 42.4
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 1.9e-34 150.6 269 39.4
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 7.3e-34 148.7 264 45.5
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 2.1e-33 147.1 257 41.2
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 3.6e-33 146.4 237 41.4
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 8.0e-33 145.2 244 42.6
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 1.0e-32 144.8 166 52.4
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.0e-32 144.8 130 56.9
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 4.0e-32 142.9 247 43.7
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 1.5e-31 141.0 220 44.1
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 1.5e-31 141.0 244 41.4
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 7.0e-29 132.1 151 51.0
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 1.7e-27 127.5 110 59.1
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 2.3e-27 127.1 110 59.1
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 8.6e-27 125.2 194 42.8
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 1.9e-26 124.0 110 58.2
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 7.3e-26 122.1 194 43.3
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 1.6e-25 120.9 177 44.6
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 3.6e-25 119.8 110 57.3
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 2.9e-22 110.2 117 50.4
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 3.7e-22 109.8 124 48.4
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 4.6e-20 102.8 114 49.1
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 1.2e-17 94.7 143 44.1
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 1.2e-15 88.2 165 38.8
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 1.7e-14 84.3 120 42.5
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 9.2e-13 78.6 148 32.4
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 3.5e-12 76.6 189 32.3
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 1.3e-11 74.7 289 29.4
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 1.3e-11 74.7 83 51.8
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.3e-11 74.7 67 55.2
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 1.7e-11 74.3 148 32.4
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 2.8e-09 67.0 140 35.0
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.5e-07 61.2 85 47.1
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 2.9e-06 57.0 51 54.9
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 4.9e-06 56.2 143 35.0


User provided reference genes

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