Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4337 Papaver somniferum HOM05D004778 ORTHO05D005679 3.9e-19 97.4 60 100.0
PSO384G2791 Papaver somniferum HOM05D004778 ORTHO05D005679 1.1e-18 95.9 60 98.3
PSO339G1550 Papaver somniferum HOM05D004778 ORTHO05D005679 8.1e-17 89.7 60 91.7
PSO339G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 2.9e-14 81.3 60 86.7
PSO384G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 1.4e-13 79.0 60 81.7
PSO339G3914 Papaver somniferum HOM05D004778 ORTHO05D005679 4.6e-12 73.9 61 75.4
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 1.7e-11 72.0 60 70.0
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 3.9e-11 70.9 60 71.7
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 8.6e-11 69.7 58 70.7
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.1e-10 69.3 60 70.0
PSO339G2985 Papaver somniferum HOM05D004778 ORTHO05D005679 1.5e-10 68.9 59 72.9
PSO384G3806 Papaver somniferum HOM05D004778 ORTHO05D005679 2.5e-10 68.2 59 71.2
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 4.3e-10 67.4 60 68.3
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 7.3e-10 66.6 60 68.3
CANSAT78G1478 Cannabis sativa HOM05D004778 ORTHO05D005679 9.5e-10 66.2 60 70.0
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 1.2e-09 65.9 60 68.3
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 2.1e-09 65.1 60 65.0
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 2.1e-09 65.1 60 66.7
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 2.1e-09 65.1 60 63.3
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 3.6e-09 64.3 60 65.0
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 6.2e-09 63.5 60 65.0
Sabra19G0043900 Salix brachista HOM05D004778 ORTHO05D005679 8.1e-09 63.2 61 65.6
Sabra19G0047200 Salix brachista HOM05D004778 ORTHO05D005679 8.1e-09 63.2 61 65.6
Cfa001534 Carpinus fangiana HOM05D004778 ORTHO05D005679 1.1e-08 62.8 61 65.6
TAR623G1546 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.1e-08 62.8 60 60.0
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 1.4e-08 62.4 60 63.3
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 1.4e-08 62.4 58 63.8
TWI32G0653 Tripterygium wilfordii HOM05D004778 ORTHO05D005679 1.8e-08 62.0 60 61.7
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 6.8e-08 60.1 60 61.7
PGR142G3834 Punica granatum HOM05D004778 ORTHO05D005679 4.4e-07 57.4 61 63.9
Rhsim13G0232700 Rhododendron simsii HOM05D004778 ORTHO05D005679 4.4e-07 57.4 61 60.7
PGSC0003DMG400008381 Solanum tuberosum HOM05D004778 ORTHO05D005679 4.4e-07 57.4 61 62.3
AL7G26630 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 5.8e-07 57.0 60 60.0
AT4G26320 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 5.8e-07 57.0 60 60.0
Eucgr.K01501 Eucalyptus grandis HOM05D004778 ORTHO05D005679 5.8e-07 57.0 57 66.7
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 5.8e-07 57.0 60 60.0
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 9.9e-07 56.2 60 60.0
PGSC0003DMG400032211 Solanum tuberosum HOM05D004778 ORTHO05D005679 2.2e-06 55.1 58 58.6
A01p17570 Brassica napus HOM05D004778 ORTHO05D005679 2.9e-06 54.7 60 56.7
BraA01t01710Z Brassica rapa HOM05D004778 ORTHO05D005679 2.9e-06 54.7 60 56.7
MD03G1004000 Malus domestica HOM05D004778 ORTHO05D005679 2.9e-06 54.7 61 59.0
Carub.0008s1702 Capsella rubella HOM05D004778 ORTHO05D005679 3.7e-06 54.3 61 59.0
CARHR233890 Cardamine hirsuta HOM05D004778 ORTHO05D005679 3.7e-06 54.3 60 56.7
COL.COLO4_36083 Corchorus olitorius HOM05D004778 ORTHO05D005679 3.7e-06 54.3 62 59.7
Prupe.6G003500 Prunus persica HOM05D004778 ORTHO05D005679 3.7e-06 54.3 61 60.7
AT3G13520 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 4.9e-06 53.9 61 59.0
C07p54800 Brassica napus HOM05D004778 ORTHO05D005679 4.9e-06 53.9 60 56.7
BcaC06g32759 Brassica carinata HOM05D004778 ORTHO05D005679 6.4e-06 53.5 60 55.0
BcaNung02429 Brassica carinata HOM05D004778 ORTHO05D005679 6.4e-06 53.5 60 53.3
A03p56600 Brassica napus HOM05D004778 ORTHO05D005679 6.4e-06 53.5 60 55.0
Cfa009564 Carpinus fangiana HOM05D004778 ORTHO05D005679 6.4e-06 53.5 61 59.0
Solyc01g005590.2 Solanum lycopersicum HOM05D004778 ORTHO05D005679 6.4e-06 53.5 58 56.9
Aqoxy2G00513 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 8.4e-06 53.1 58 55.2
BcaC09g50690 Brassica carinata HOM05D004778 ORTHO05D005679 8.4e-06 53.1 60 56.7
C01p22170 Brassica napus HOM05D004778 ORTHO05D005679 8.4e-06 53.1 60 56.7
BolC1t02147H Brassica oleracea HOM05D004778 ORTHO05D005679 8.4e-06 53.1 60 56.7
BolC7t45969H Brassica oleracea HOM05D004778 ORTHO05D005679 8.4e-06 53.1 60 55.0
Thhalv10027232m.g Eutrema salsugineum HOM05D004778 ORTHO05D005679 8.4e-06 53.1 60 53.3
Gohir.D13G103100 Gossypium hirsutum HOM05D004778 ORTHO05D005679 8.4e-06 53.1 60 56.7


User provided reference genes

Program Settings