Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.4e-164 582.8 280 100.0
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 5.0e-162 574.3 280 97.5
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 2.6e-110 402.5 269 68.4
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 8.4e-109 397.5 281 65.8
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.9e-108 396.4 280 63.2
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 2.5e-108 396.0 269 65.8
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 1.2e-107 393.7 270 66.3
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.0e-106 390.6 281 64.4
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.1e-105 387.1 282 64.5
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 1.1e-105 387.1 269 63.2
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.5e-105 386.7 273 64.1
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 5.7e-105 384.8 269 65.4
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 7.4e-105 384.4 269 65.4
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 7.4e-105 384.4 274 66.4
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 2.8e-104 382.5 268 64.2
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 4.8e-104 381.7 281 61.2
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 6.2e-104 381.3 280 60.7
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 1.4e-103 380.2 269 65.4
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.8e-103 379.8 252 66.3
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.8e-103 379.8 272 62.1
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 3.1e-103 379.0 280 63.6
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.2e-102 377.1 273 60.8
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 5.8e-102 374.8 271 62.0
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 5.8e-102 374.8 304 58.6
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.0e-101 374.0 304 58.6
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.5e-100 369.4 273 60.4
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.2e-100 369.0 288 60.4
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 9.3e-100 367.5 271 60.5
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 4.6e-99 365.2 275 59.3
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 6.1e-99 364.8 288 59.7
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 6.1e-99 364.8 269 63.6
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.3e-98 363.6 252 65.5
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 3.9e-98 362.1 275 59.3
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 5.1e-98 361.7 254 65.0
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 8.7e-98 360.9 338 53.0
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.5e-97 360.1 275 60.4
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 1.9e-97 359.8 280 58.6
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 3.3e-97 359.0 271 59.4
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 4.3e-97 358.6 273 60.1
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 9.7e-97 357.5 279 60.6
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 2.2e-96 356.3 269 60.2
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 3.7e-96 355.5 270 60.4
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 3.7e-96 355.5 255 62.4
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 6.3e-96 354.8 255 62.4
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.4e-95 353.6 278 60.1
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.4e-95 353.6 271 59.0
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 1.8e-95 353.2 330 50.6
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.8e-95 353.2 256 62.1
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 3.1e-95 352.4 269 60.2
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 9.0e-95 350.9 270 59.3
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.2e-94 350.5 259 61.0
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.6e-94 349.4 274 59.1
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 3.4e-94 349.0 270 59.3
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 4.5e-94 348.6 273 60.1
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 5.9e-94 348.2 274 59.9
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 5.9e-94 348.2 275 59.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 2.9e-93 345.9 268 58.6
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.8e-93 345.5 270 58.5
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 8.5e-93 344.4 269 58.7
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.5e-92 342.8 298 55.7
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 7.2e-92 341.3 269 58.4
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.6e-91 340.1 273 59.3
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.8e-90 336.7 296 54.7
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 1.8e-90 336.7 371 45.8
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 3.9e-90 335.5 255 59.6
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 4.3e-89 332.0 327 49.5
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 7.4e-89 331.3 251 59.8
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.7e-88 330.1 258 56.6
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.7e-88 330.1 245 62.9
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.7e-88 328.9 281 56.2
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 8.2e-88 327.8 269 56.5
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 8.2e-88 327.8 274 55.8
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 9.1e-87 324.3 288 55.6
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 2.6e-86 322.8 232 63.8
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.5e-86 322.0 310 50.6
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 2.2e-85 319.7 249 58.2
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 1.9e-84 316.6 235 60.4
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.2e-83 313.9 247 57.9
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.0e-82 310.8 269 53.9
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.0e-82 309.3 280 53.2
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 5.1e-82 308.5 256 56.2
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.4e-79 300.4 202 65.8
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 2.4e-79 299.7 245 55.9
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 3.5e-78 295.8 251 57.0
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.0e-77 294.3 267 52.8
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 1.9e-76 290.0 207 62.8
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 5.5e-76 288.5 219 59.8
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 9.4e-76 287.7 207 62.3
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.6e-75 287.0 200 61.5
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 2.1e-75 286.6 202 62.4
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 4.7e-75 285.4 200 60.5
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 1.0e-74 284.3 207 61.8
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 3.0e-74 282.7 217 57.1
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 3.0e-74 282.7 327 45.9
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 8.8e-74 281.2 202 65.3
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 7.4e-73 278.1 210 60.5
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 7.4e-73 278.1 201 61.2
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.1e-71 274.2 193 62.7
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.6e-70 270.4 268 48.9
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 2.3e-66 256.5 202 61.9
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.9e-60 236.9 356 37.4
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.1e-59 233.4 278 41.4
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 5.2e-58 228.8 201 52.7
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 1.5e-57 227.3 183 55.7
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 1.7e-56 223.8 225 49.8
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 4.1e-55 219.2 283 40.3
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 8.6e-53 211.5 269 39.4
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.9e-52 210.3 204 53.9
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.6e-43 180.6 140 62.1
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 2.9e-40 169.9 176 48.9
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 3.6e-35 152.9 166 42.2
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 4.1e-31 139.4 127 55.1
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 7.1e-31 138.7 183 39.9
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 3.1e-26 123.2 167 39.5
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.2e-25 121.3 151 45.0
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 5.6e-20 102.4 93 53.8
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 6.2e-19 99.0 242 28.5
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 4.9e-16 89.4 159 33.3
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 6.9e-10 68.9 59 50.8
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.7e-08 64.3 73 45.2


User provided reference genes

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