Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 1.5e-161 572.8 293 100.0
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 1.4e-69 267.3 239 66.1
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 9.6e-47 191.4 373 37.3
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 5.8e-44 182.2 373 37.3
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 1.3e-43 181.0 375 36.8
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 2.7e-41 173.3 371 33.2
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 1.6e-38 164.1 374 34.5
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.2e-36 157.9 372 32.0
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 2.2e-35 153.7 320 34.7
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 2.2e-35 153.7 377 32.6
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 2.9e-35 153.3 379 30.9
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 6.5e-35 152.1 372 30.9
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 8.4e-35 151.8 373 30.8
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 3.2e-34 149.8 372 32.3
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 3.2e-34 149.8 372 31.5
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 3.2e-34 149.8 372 31.5
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 5.5e-34 149.1 371 31.3
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 2.1e-33 147.1 378 31.5
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 6.0e-33 145.6 372 29.6
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 7.9e-33 145.2 372 32.8
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.3e-32 144.4 374 30.5
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 1.8e-32 144.1 370 30.8
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 1.8e-32 144.1 371 31.8
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 2.3e-32 143.7 372 31.7
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.3e-32 143.7 371 29.9
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 6.7e-32 142.1 371 30.2
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 8.7e-32 141.7 372 30.1
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.7e-32 141.7 371 30.5
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.7e-32 141.7 371 29.9
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.7e-32 141.7 371 29.9
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 8.7e-32 141.7 379 30.9
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 1.1e-31 141.4 373 31.1
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 4.3e-31 139.4 373 30.8
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.4e-31 138.7 371 29.6
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 9.6e-31 138.3 370 29.5
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.3e-30 137.9 435 29.2
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 2.8e-30 136.7 372 29.8
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 2.8e-30 136.7 341 30.5
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 2.8e-30 136.7 369 29.8
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 3.7e-30 136.3 372 30.1
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 4.8e-30 136.0 319 31.7
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 6.2e-30 135.6 371 29.1
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.1e-29 134.8 370 30.3
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.4e-29 134.4 416 28.4
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 1.4e-29 134.4 358 31.0
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 1.8e-29 134.0 371 29.1
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 1.8e-29 134.0 372 29.8
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 3.1e-29 133.3 370 28.9
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 3.1e-29 133.3 370 28.6
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 5.3e-29 132.5 371 29.1
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 1.2e-28 131.3 373 29.2
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 1.2e-28 131.3 373 29.0
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 1.5e-28 131.0 348 29.6
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 1.5e-28 131.0 280 34.3
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 1.5e-28 131.0 372 29.3
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 4.5e-28 129.4 372 29.0
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 1.3e-27 127.9 372 28.8
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 1.3e-27 127.9 370 28.6
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 1.7e-27 127.5 372 29.0
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 2.9e-27 126.7 369 28.5
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.1e-26 124.8 373 28.2
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 1.4e-26 124.4 373 28.2
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.4e-26 124.4 373 27.9
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 1.9e-26 124.0 370 27.3
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 5.5e-26 122.5 236 34.7
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 7.1e-26 122.1 372 27.4
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 1.6e-25 120.9 369 28.2
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 3.5e-25 119.8 355 28.5
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 4.6e-25 119.4 371 27.2
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 6.7e-24 115.5 372 26.9
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 1.1e-23 114.8 188 40.4
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 1.1e-23 114.8 375 27.2
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 3.3e-23 113.2 351 29.3
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 4.3e-23 112.8 355 28.7
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 4.3e-23 112.8 238 33.6
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 5.7e-23 112.5 355 27.0
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.3e-22 111.3 355 28.7
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 2.2e-22 110.5 319 27.9
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 2.2e-22 110.5 365 27.1
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.2e-22 110.5 366 27.9
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 2.8e-22 110.2 375 28.0
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 2.8e-22 110.2 371 28.6
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 3.7e-22 109.8 371 26.7
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 3.7e-22 109.8 355 27.0
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 3.7e-22 109.8 355 28.2
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 3.7e-22 109.8 240 33.8
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 6.3e-22 109.0 357 28.9
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 1.1e-21 108.2 412 26.0
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 1.4e-21 107.8 330 28.5
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.1e-21 106.7 373 26.3
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 4.1e-21 106.3 372 26.9
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 5.3e-21 105.9 360 26.1
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 9.0e-21 105.1 364 27.2
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.2e-20 104.8 349 26.9
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 1.5e-20 104.4 262 32.4
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 2.6e-20 103.6 253 32.8
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 5.9e-20 102.4 324 26.2
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 5.9e-20 102.4 375 25.6
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 5.9e-20 102.4 292 31.5
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 1.7e-19 100.9 314 26.4
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 3.8e-19 99.8 364 26.6
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 3.8e-19 99.8 373 24.9
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 5.0e-19 99.4 364 26.6
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 8.5e-19 98.6 347 25.9
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.9e-18 97.4 361 25.8
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 2.5e-18 97.1 310 27.4
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 3.2e-18 96.7 240 31.7
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 5.5e-18 95.9 267 28.5
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 3.6e-17 93.2 246 31.3
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 7.9e-17 92.0 321 25.2
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 3.9e-16 89.7 339 27.4
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 8.8e-16 88.6 174 30.5
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 1.5e-15 87.8 302 27.2
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 4.3e-15 86.3 241 27.4
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 4.3e-15 86.3 173 28.3
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 7.4e-15 85.5 240 29.6
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 6.3e-14 82.4 241 27.8
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 3.4e-12 76.6 315 24.4
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 5.9e-12 75.9 235 29.4
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 5.9e-12 75.9 223 33.2
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.9e-11 73.6 189 30.2
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 2.9e-11 73.6 205 25.9
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 5.0e-11 72.8 232 27.2
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 2.7e-09 67.0 241 28.2
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 1.8e-08 64.3 91 40.7
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 1.8e-08 64.3 297 23.2
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 2.3e-08 63.9 211 28.0
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 8.8e-08 62.0 220 29.5
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 8.8e-08 62.0 212 27.4
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.5e-07 61.2 189 28.0
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 2.8e-06 57.0 277 24.9


User provided reference genes

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